| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yijE [C]
Identifier: 78067503
GI number: 78067503
Start: 3170877
End: 3171812
Strand: Direct
Name: yijE [C]
Synonym: Bcep18194_A6034
Alternate gene names: 78067503
Gene position: 3170877-3171812 (Clockwise)
Preceding gene: 78067501
Following gene: 78067508
Centisome position: 85.84
GC content: 70.73
Gene sequence:
>936_bases ATGACCACGCTCGCCGCCGCCCCCGTGCGCCGCGCGCTCGACACGCGCGCCGTCGGCCTGATGCTGCTGCTGTGCGCGAT CTGGGGCTTCCAGCAGGTCGCGATCAAGAGCACCAACGCCGCGATCGCGCCGATGTTCCAGGCCGGGCTGCGCTCGGTGA TCGCGGCGGTGCTGCTATGGGGCTGGGCGCGCTCGCGCGGTACGCCGCTGTTCCAGGCGGACGGCACGTTCGGCGCGGGT CTCGCGGCCGGTGCATTGTTCGCCGGCGAATTCATCTGCGTGTTCTTCGGGCTGACGCTGACGAGTGCGTCACACATGGC GATCTTCCTGTACACGGCGCCGTGCTTCACCGCGCTCGGCCTGCACCTGTTCGCACCGGGCGAACGGCTGCAGCGCACGC AGTGGGCCGGCGTCGGCCTGGCATTCGCCGGCATCGCGCTCGCATTCGCGGACGGCTTCCTGAAACCGCGCGCACCCGGC GCATCGGTACTGGCCGGGCTCGCCGGCGACGCGCTCGGGATCCTCGGCGGCGCGATGTGGGCTGCGACGACGGTCGTCGT GCGCTCGACGGCGCTTGCGCGGGCGAGCGCGAGCAAGACGCTGTTCTACCAGCTCGCGGTATCGGCGGTCGTACTGGTCG CGCTTGCCGCACTGTTCGGCCAGGTGTCGTTCGCGCACGTCACGCCGGTCGCGGTGGCGAGCCTCGCGTACCAGTCGGTG ATCGTCGCGTTCGTCAGCTACCTGTCGTGGTTCTGGCTGCTGACGCGCTACAGCGCGTCGCGGCTGTCCGTCTTCACGTT CCTGTCGCCGCTGTTCGGCGTTGCGTTCGGCGTGCTGCTGCTCGGCGAATCGGTCGGCTGGCGCTTCATGTCCGCGGCTG CGCTCGTGCTGACCGGCATCGCGCTCGTCAACGCGCCGACACGCCGGCGGGCATGA
Upstream 100 bases:
>100_bases AAGACAGCCACACTGCCGTGCGAAACCGCCGATTCGAGCGCGCCGGATGCGCCGCCCTCCCGATCCCGCAGCCGTCGTAC CGAACCGGCGAGGTCCGGCA
Downstream 100 bases:
>100_bases CGACCCCGCGCAACACGCGCCCGTCCACGCAATAAAAAAGGCTGCCCCACGGGGCAGCCTCTTCCGCACATCCGCTCCGG CGCGGCGCGCGAGACTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTTLAAAPVRRALDTRAVGLMLLLCAIWGFQQVAIKSTNAAIAPMFQAGLRSVIAAVLLWGWARSRGTPLFQADGTFGAG LAAGALFAGEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFAPGERLQRTQWAGVGLAFAGIALAFADGFLKPRAPG ASVLAGLAGDALGILGGAMWAATTVVVRSTALARASASKTLFYQLAVSAVVLVALAALFGQVSFAHVTPVAVASLAYQSV IVAFVSYLSWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPTRRRA
Sequences:
>Translated_311_residues MTTLAAAPVRRALDTRAVGLMLLLCAIWGFQQVAIKSTNAAIAPMFQAGLRSVIAAVLLWGWARSRGTPLFQADGTFGAG LAAGALFAGEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFAPGERLQRTQWAGVGLAFAGIALAFADGFLKPRAPG ASVLAGLAGDALGILGGAMWAATTVVVRSTALARASASKTLFYQLAVSAVVLVALAALFGQVSFAHVTPVAVASLAYQSV IVAFVSYLSWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPTRRRA >Mature_310_residues TTLAAAPVRRALDTRAVGLMLLLCAIWGFQQVAIKSTNAAIAPMFQAGLRSVIAAVLLWGWARSRGTPLFQADGTFGAGL AAGALFAGEFICVFFGLTLTSASHMAIFLYTAPCFTALGLHLFAPGERLQRTQWAGVGLAFAGIALAFADGFLKPRAPGA SVLAGLAGDALGILGGAMWAATTVVVRSTALARASASKTLFYQLAVSAVVLVALAALFGQVSFAHVTPVAVASLAYQSVI VAFVSYLSWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGIALVNAPTRRRA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32445; Mature: 32313
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLAAAPVRRALDTRAVGLMLLLCAIWGFQQVAIKSTNAAIAPMFQAGLRSVIAAVLLW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GWARSRGTPLFQADGTFGAGLAAGALFAGEFICVFFGLTLTSASHMAIFLYTAPCFTALG HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH LHLFAPGERLQRTQWAGVGLAFAGIALAFADGFLKPRAPGASVLAGLAGDALGILGGAMW HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AATTVVVRSTALARASASKTLFYQLAVSAVVLVALAALFGQVSFAHVTPVAVASLAYQSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IVAFVSYLSWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALVNAPTRRRA HHHCCCHHCCC >Mature Secondary Structure TTLAAAPVRRALDTRAVGLMLLLCAIWGFQQVAIKSTNAAIAPMFQAGLRSVIAAVLLW CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GWARSRGTPLFQADGTFGAGLAAGALFAGEFICVFFGLTLTSASHMAIFLYTAPCFTALG HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH LHLFAPGERLQRTQWAGVGLAFAGIALAFADGFLKPRAPGASVLAGLAGDALGILGGAMW HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AATTVVVRSTALARASASKTLFYQLAVSAVVLVALAALFGQVSFAHVTPVAVASLAYQSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IVAFVSYLSWFWLLTRYSASRLSVFTFLSPLFGVAFGVLLLGESVGWRFMSAAALVLTGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALVNAPTRRRA HHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]