Click here to switch to the map view.

The map label for this gene is chaC [H]

Identifier: 78067493

GI number: 78067493

Start: 3158704

End: 3159336

Strand: Direct

Name: chaC [H]

Synonym: Bcep18194_A6024

Alternate gene names: 78067493

Gene position: 3158704-3159336 (Clockwise)

Preceding gene: 78067492

Following gene: 78067494

Centisome position: 85.51

GC content: 70.14

Gene sequence:

>633_bases
ATGCGCAACGCCGCGACGCTCCCGCCTGCCTACCCGCCGTCGATCGGCGACGGGCGTCTGCTGACGGAAGACGAGCTCGC
GGCCTCGCTCGCACACACGATGCGCGACTGGGACGGCCAGCAGGATCTCTGGCTGTTCGGCTATGGCTCGCTGATCTGGA
ACCCGGGGTTGCCGACCATCACCGCCGTGCGCGGCAAGGTGCACGGCTATCACCGCGGGCTCTACCTGTGGTCGCGCGTG
AACCGCGGCACCCCCGAACGCCCGGGCCTCGTGCTCGCGCTCGATCGCGGCGGCTCATGCTCGGGCATTGCGTTCCGGCT
CGCCGGCCCGACCGCGCAACCGCACCTCGAAACGTTGTGGAAACGCGAGATGCCGATGGGTTCGTACCGGCCCGCGTGGC
TGCCGTGCTCGCTGGAAAACGGTGAACGCGTGAACGCGCTCGCGTTCGTGATGCGCCGCGACGCGCCCACCTACACGGGC
AAGCTGACCGATCCCGTCGTGAAGGAAGTGTTCGGCTGCGCGGCCGGCCGTTACGGCACGACACTCGACTACGTGAGCCG
CACGGTCGACGCGCTGCGCGCGAGCGGCATCCCCGATCGCGCGCTGGAAGGGCTGCTCGCGCGATGCCGGTGA

Upstream 100 bases:

>100_bases
CGAGACGAGCGACGAAGACGCGGCCGAGATGGAAGCGCTCGAAGTCGACATCCTCGCGAAGCTGGGCTTCCCGAACCCGT
ACCAGTAAGCCCTCTGCACG

Downstream 100 bases:

>100_bases
CGCGGCCCGGCGCCCGGCTTGCCGCCACGCGCAGCAGCGCCGCGTGCGCATTCGAACGAGGGCAATTCCGATGAACCCGT
CACGCTGGTCGCGTTGCAAG

Product: ChaC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRNAATLPPAYPPSIGDGRLLTEDELAASLAHTMRDWDGQQDLWLFGYGSLIWNPGLPTITAVRGKVHGYHRGLYLWSRV
NRGTPERPGLVLALDRGGSCSGIAFRLAGPTAQPHLETLWKREMPMGSYRPAWLPCSLENGERVNALAFVMRRDAPTYTG
KLTDPVVKEVFGCAAGRYGTTLDYVSRTVDALRASGIPDRALEGLLARCR

Sequences:

>Translated_210_residues
MRNAATLPPAYPPSIGDGRLLTEDELAASLAHTMRDWDGQQDLWLFGYGSLIWNPGLPTITAVRGKVHGYHRGLYLWSRV
NRGTPERPGLVLALDRGGSCSGIAFRLAGPTAQPHLETLWKREMPMGSYRPAWLPCSLENGERVNALAFVMRRDAPTYTG
KLTDPVVKEVFGCAAGRYGTTLDYVSRTVDALRASGIPDRALEGLLARCR
>Mature_210_residues
MRNAATLPPAYPPSIGDGRLLTEDELAASLAHTMRDWDGQQDLWLFGYGSLIWNPGLPTITAVRGKVHGYHRGLYLWSRV
NRGTPERPGLVLALDRGGSCSGIAFRLAGPTAQPHLETLWKREMPMGSYRPAWLPCSLENGERVNALAFVMRRDAPTYTG
KLTDPVVKEVFGCAAGRYGTTLDYVSRTVDALRASGIPDRALEGLLARCR

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=160, Percent_Identity=29.375, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI145693119, Length=197, Percent_Identity=36.0406091370558, Blast_Score=127, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24641578, Length=180, Percent_Identity=31.1111111111111, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45553467, Length=88, Percent_Identity=39.7727272727273, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24649389, Length=88, Percent_Identity=39.7727272727273, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24649391, Length=88, Percent_Identity=39.7727272727273, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24649393, Length=88, Percent_Identity=39.7727272727273, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 23066; Mature: 23066

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNAATLPPAYPPSIGDGRLLTEDELAASLAHTMRDWDGQQDLWLFGYGSLIWNPGLPTI
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCEE
TAVRGKVHGYHRGLYLWSRVNRGTPERPGLVLALDRGGSCSGIAFRLAGPTAQPHLETLW
EHHHCCCCHHHHHHHEEHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHH
KREMPMGSYRPAWLPCSLENGERVNALAFVMRRDAPTYTGKLTDPVVKEVFGCAAGRYGT
HHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
TLDYVSRTVDALRASGIPDRALEGLLARCR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRNAATLPPAYPPSIGDGRLLTEDELAASLAHTMRDWDGQQDLWLFGYGSLIWNPGLPTI
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCEE
TAVRGKVHGYHRGLYLWSRVNRGTPERPGLVLALDRGGSCSGIAFRLAGPTAQPHLETLW
EHHHCCCCHHHHHHHEEHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHH
KREMPMGSYRPAWLPCSLENGERVNALAFVMRRDAPTYTGKLTDPVVKEVFGCAAGRYGT
HHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
TLDYVSRTVDALRASGIPDRALEGLLARCR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]