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The map label for this gene is alsB [C]

Identifier: 78067480

GI number: 78067480

Start: 3145596

End: 3146660

Strand: Direct

Name: alsB [C]

Synonym: Bcep18194_A6011

Alternate gene names: 78067480

Gene position: 3145596-3146660 (Clockwise)

Preceding gene: 78067476

Following gene: 78067481

Centisome position: 85.15

GC content: 73.71

Gene sequence:

>1065_bases
ATGGCAGGCGAATCCGGGCCGCGCTGGCGCAAGCGCACCGCGCGCTTCGACGAGATCGCGGCGCTCGCCGGGGTCAGCAC
GACCACCGTCGACCGCGTGCTGAACGAGCGCGGCAGCGTCTCGGCGCAGGCGCGCGAACGCGTGGTGGCGGCCGCGCGGC
AGCTCGGCGTGCCGCGCCAGCTGCCCGACACGCGGCACGGGCTGATCCACGTCGACGTGCTGCTGCCGGACACCGACGCG
GCGTTCTTCCGGCGGCTGCAGCTGGCGCTGCAGCGCTCGCTGCAGATGCTCGACCGGCGCGTGGTCGTGCACCGGACGAT
CCTGCCCGCCGCCGACGACGAACGCGCCGCCACGCTGATCGAGCGGCCCGCGTACCGGCGCGCGGCGCTGATCGTCACGG
CGCGCGACACGGCCCGCGTGCGCGACGCGCTGGCCGGCGCGATCGCGCGCGGCGAGACCGTCGTCACGATGGTCACCGAC
ATCGGCGGCATCGACCGCGTGCACTTCGCGGGCATCGACAACTATCGCGCCGGGCGCACGGCCGGCTACTACATCGGCCG
CCTGGCGGCACGCCCGGGCCGCGTGCTGCTGCTCGGCGGGCGCATGGGCTACCGCGCGCACGCGGACCGGATGGCCGGCT
GCCGCGACCAGCTCGCCGAAGCGTTCGCCGCCGTCCGCTGCAACGACGAGCCGGTCGAGACGCTTGACCAGGACGACCGC
TGCTACCGCGCCGTGACGAAGGCGCTGCAGGCGCACGACGACGTGGTCGCGATCTACAACAGCGGCGCGGGCTCGGCCGG
CATCGAAGCGGCGCTGCGCAAGGCCGGCGCGGCTGGCCGCGTCGTGTGGATCGGCCACGAGATGATCGACCTGCACCGCA
CCTTCATCGAAGCCGGCGCGATGGATCTCGCGATCGACCAGGACCCGGACGGGCAGGTGATTTCCGCGCTGCAGCACGTG
CTGCATGCGTGCGGGATCGTCGAACAGCCGCCGCCGGCCGATCCGGTCGAATTCCGCGTGTTCTGCCCGGCAAACGTGAG
GACGAGCGCCTACCTGCCGGCGTGA

Upstream 100 bases:

>100_bases
AGCCTCCCCCGCTCAATCGAAACGTTGACGAAATTTCGCCATCGCTTTAGCGTTCCTCGCATCGCCACGTCTCGATGGCG
ACACCACGATGGAGACAACC

Downstream 100 bases:

>100_bases
ATCCCAACGCCCGGCACACCGTCTGTCGCGCCGCATGCGCGTTGCGAAAAAATCGACCGCCGCATTGGCGATTTTTCGTC
AACGTTTGTCATGCAGCCCG

Product: LacI family transcription regulator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: Transcriptional Regulator LacI Family; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; LacI Family Regulatory Protein; HTH-Type Transcriptional Repressor PurR; Transcriptional Regulator Protein LacI Family; Regulatory Protein LacI Family; HTH-Type Transcriptional Regulator MalR; LacI Regulatory Protein; ABC-Type Sugar Transport System Periplasmic Component; Regulatory Protein; Transcriptional Regulator LacI Family Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; Transcription Regulator Protein; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQLPDTRHGLIHVDVLLPDTDA
AFFRRLQLALQRSLQMLDRRVVVHRTILPAADDERAATLIERPAYRRAALIVTARDTARVRDALAGAIARGETVVTMVTD
IGGIDRVHFAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLAEAFAAVRCNDEPVETLDQDDR
CYRAVTKALQAHDDVVAIYNSGAGSAGIEAALRKAGAAGRVVWIGHEMIDLHRTFIEAGAMDLAIDQDPDGQVISALQHV
LHACGIVEQPPPADPVEFRVFCPANVRTSAYLPA

Sequences:

>Translated_354_residues
MAGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQLPDTRHGLIHVDVLLPDTDA
AFFRRLQLALQRSLQMLDRRVVVHRTILPAADDERAATLIERPAYRRAALIVTARDTARVRDALAGAIARGETVVTMVTD
IGGIDRVHFAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLAEAFAAVRCNDEPVETLDQDDR
CYRAVTKALQAHDDVVAIYNSGAGSAGIEAALRKAGAAGRVVWIGHEMIDLHRTFIEAGAMDLAIDQDPDGQVISALQHV
LHACGIVEQPPPADPVEFRVFCPANVRTSAYLPA
>Mature_353_residues
AGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQLPDTRHGLIHVDVLLPDTDAA
FFRRLQLALQRSLQMLDRRVVVHRTILPAADDERAATLIERPAYRRAALIVTARDTARVRDALAGAIARGETVVTMVTDI
GGIDRVHFAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLAEAFAAVRCNDEPVETLDQDDRC
YRAVTKALQAHDDVVAIYNSGAGSAGIEAALRKAGAAGRVVWIGHEMIDLHRTFIEAGAMDLAIDQDPDGQVISALQHVL
HACGIVEQPPPADPVEFRVFCPANVRTSAYLPA

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38446; Mature: 38315

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQ
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
LPDTRHGLIHVDVLLPDTDAAFFRRLQLALQRSLQMLDRRVVVHRTILPAADDERAATLI
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ERPAYRRAALIVTARDTARVRDALAGAIARGETVVTMVTDIGGIDRVHFAGIDNYRAGRT
HCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCCCC
AGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLAEAFAAVRCNDEPVETLDQDDR
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHH
CYRAVTKALQAHDDVVAIYNSGAGSAGIEAALRKAGAAGRVVWIGHEMIDLHRTFIEAGA
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCC
MDLAIDQDPDGQVISALQHVLHACGIVEQPPPADPVEFRVFCPANVRTSAYLPA
EEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AGESGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSAQARERVVAAARQLGVPRQ
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
LPDTRHGLIHVDVLLPDTDAAFFRRLQLALQRSLQMLDRRVVVHRTILPAADDERAATLI
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ERPAYRRAALIVTARDTARVRDALAGAIARGETVVTMVTDIGGIDRVHFAGIDNYRAGRT
HCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCCCC
AGYYIGRLAARPGRVLLLGGRMGYRAHADRMAGCRDQLAEAFAAVRCNDEPVETLDQDDR
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHH
CYRAVTKALQAHDDVVAIYNSGAGSAGIEAALRKAGAAGRVVWIGHEMIDLHRTFIEAGA
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCC
MDLAIDQDPDGQVISALQHVLHACGIVEQPPPADPVEFRVFCPANVRTSAYLPA
EEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA