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The map label for this gene is glpR [H]

Identifier: 78067471

GI number: 78067471

Start: 3136711

End: 3137490

Strand: Direct

Name: glpR [H]

Synonym: Bcep18194_A6002

Alternate gene names: 78067471

Gene position: 3136711-3137490 (Clockwise)

Preceding gene: 78067467

Following gene: 78067472

Centisome position: 84.91

GC content: 68.08

Gene sequence:

>780_bases
ATGACCCGAGATCCCCGCCTCACCCTCAACGCGCGCCAGCAGGAACTGCTCGAATGGGTGCAGCGCGACGGCTTCGTGAC
CGTCGACGATCTCGCCGCGCATTTCGCGGTGACGCCGCAGACGATCCGGCGCGACGTGAACTGGCTCGCCGACCTGAACC
TGCTGCGCCGCTACCACGGCGGCGCGAGCCTGCCGACCAGCTCGGAGAACGTGTCGTACACGGCCCGACAGCGGATGTTC
CACGACGAGAAGCGGCGCATCGCGGCGCTCGCGGCATCGCACATTCCCGACCAGGCGTCGCTGTTCATCAACCTCGGCAC
GACCACCGAGGAAGTCGCCCGCGCGCTGAACCGCCACCACGGGCTGCACGTGATCACGAACAACCTGAACGTCGCGTCGA
TGATGAGCGGCTACCCCGACTGCGAGGTGCTGATCACCGGCGGCATCGTGCGGCCGTGGGACAAGGGGATCGTCGGCGAA
CTCGCGATCGACTTCATCCGCCAGTTCAAGGTCGACTACGCGATCATCGGCACGTCGGCGATCGAGGCCGACGGCACGCT
GCGCGACTTCGACACGCGCGAAGTGCGCGTGGCCGAGGCGATCATGCAGCATGCGCGCACCGTCTATCTCGTGACCGACC
ATTCGAAGGTCGGCCGCCCCGCGCTGGTGCGCCAGGGCCACCTGAGCCAGGTACACGCGCTCTTCACCGACAAGCCGCTG
CCGCCCGAGATGGCCGACACCGTCGCGGCCGCCGGCACCCAGGTGTACGTCGCGGAGTGA

Upstream 100 bases:

>100_bases
ATTTCTGCATGAATGCCGGGCGACCGTGCGGGCCGGGCCGGCCTAACGTCGTTGCCGCCCTTACAATACTCGCTCCGTCT
CACGACACGACCATCGAGCC

Downstream 100 bases:

>100_bases
TCGCGCCGATGCTGCACCGCACCTGAAACTTCAAGTGAAATCAAGAAGTTGGCGCTGCAAGCGAACCGCTTGCGCGTGGC
CCGGCTGTCAAAGGGAAAAT

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFAVTPQTIRRDVNWLADLNLLRRYHGGASLPTSSENVSYTARQRMF
HDEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHHGLHVITNNLNVASMMSGYPDCEVLITGGIVRPWDKGIVGE
LAIDFIRQFKVDYAIIGTSAIEADGTLRDFDTREVRVAEAIMQHARTVYLVTDHSKVGRPALVRQGHLSQVHALFTDKPL
PPEMADTVAAAGTQVYVAE

Sequences:

>Translated_259_residues
MTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFAVTPQTIRRDVNWLADLNLLRRYHGGASLPTSSENVSYTARQRMF
HDEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHHGLHVITNNLNVASMMSGYPDCEVLITGGIVRPWDKGIVGE
LAIDFIRQFKVDYAIIGTSAIEADGTLRDFDTREVRVAEAIMQHARTVYLVTDHSKVGRPALVRQGHLSQVHALFTDKPL
PPEMADTVAAAGTQVYVAE
>Mature_258_residues
TRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFAVTPQTIRRDVNWLADLNLLRRYHGGASLPTSSENVSYTARQRMFH
DEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHHGLHVITNNLNVASMMSGYPDCEVLITGGIVRPWDKGIVGEL
AIDFIRQFKVDYAIIGTSAIEADGTLRDFDTREVRVAEAIMQHARTVYLVTDHSKVGRPALVRQGHLSQVHALFTDKPLP
PEMADTVAAAGTQVYVAE

Specific function: Repressor of the glycerol-3-phosphate regulon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=230, Percent_Identity=47.3913043478261, Blast_Score=227, Evalue=5e-61,
Organism=Escherichia coli, GI87082344, Length=236, Percent_Identity=41.9491525423729, Blast_Score=192, Evalue=1e-50,
Organism=Escherichia coli, GI1788069, Length=234, Percent_Identity=29.0598290598291, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789059, Length=248, Percent_Identity=28.6290322580645, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790753, Length=249, Percent_Identity=26.9076305220884, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1789519, Length=249, Percent_Identity=26.1044176706827, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787540, Length=233, Percent_Identity=29.6137339055794, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI226510968, Length=231, Percent_Identity=29.4372294372294, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787063, Length=240, Percent_Identity=28.75, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790635, Length=253, Percent_Identity=25.6916996047431, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789170, Length=231, Percent_Identity=23.3766233766234, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 28844; Mature: 28713

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFAVTPQTIRRDVNWLADLNLLRRYHG
CCCCCCEEECCHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
GASLPTSSENVSYTARQRMFHDEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCC
GLHVITNNLNVASMMSGYPDCEVLITGGIVRPWDKGIVGELAIDFIRQFKVDYAIIGTSA
CEEEEECCCCHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCE
IEADGTLRDFDTREVRVAEAIMQHARTVYLVTDHSKVGRPALVRQGHLSQVHALFTDKPL
ECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCC
PPEMADTVAAAGTQVYVAE
CHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
TRDPRLTLNARQQELLEWVQRDGFVTVDDLAAHFAVTPQTIRRDVNWLADLNLLRRYHG
CCCCCEEECCHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
GASLPTSSENVSYTARQRMFHDEKRRIAALAASHIPDQASLFINLGTTTEEVARALNRHH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCC
GLHVITNNLNVASMMSGYPDCEVLITGGIVRPWDKGIVGELAIDFIRQFKVDYAIIGTSA
CEEEEECCCCHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCE
IEADGTLRDFDTREVRVAEAIMQHARTVYLVTDHSKVGRPALVRQGHLSQVHALFTDKPL
ECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHCCCCC
PPEMADTVAAAGTQVYVAE
CHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8752340; 10984043 [H]