| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067458
Identifier: 78067458
GI number: 78067458
Start: 3121241
End: 3121633
Strand: Reverse
Name: 78067458
Synonym: Bcep18194_A5989
Alternate gene names: NA
Gene position: 3121633-3121241 (Counterclockwise)
Preceding gene: 78067460
Following gene: 78067457
Centisome position: 84.5
GC content: 66.92
Gene sequence:
>393_bases ATGCCGATCCATCCCGTTGCGCTCGCATGCACGGCCATCCTCGGGTTGCTGCTGTTCGGGCTCGGGCTCGTCGTGTCGGT CACGCGGTTCCGCTGCACCACCGGTTCCGGGTGCGCGCCCGATCCGGCGAACGGGTTGCACAAGATCGTTCGTGCGCACG GCAACACGGCCGAATACGCGCCGTTTCTCGCGGTGCTGTTTCTCTACTTCGGCGCCCACGATCCATCGCGCGCGATCCTG GCGCTGATCGTCGCGGCAACCGTGTGCCGCTGCCTGCTCGTCGTTGGATTGCTCGCGTGGCCGACGATGGCCAACCCGAA TCCCGTGCGTTTCGTCGGCGCGCTCGGCACGTATCTGTGCGGCGCCGCGCTGTGTATCGCGCTGTTCGTCTGA
Upstream 100 bases:
>100_bases GGCGCACGGCGATGCTGCGGGTTTCCGTGATAGCCGCGCGTGTCGGCTGCGGGTACGATCGTCGGATATGCGGCGCCTTT CCGCTTTTGCCGGGAGTCCC
Downstream 100 bases:
>100_bases ACGGCGGCATGCGCGGCATACGGTACAAGTCCTGAACCGGGGAGCGGCTGCGGCGAGCGGTGATATGCTCGCGGGACGCC CGCGATCGACGGGCAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPIHPVALACTAILGLLLFGLGLVVSVTRFRCTTGSGCAPDPANGLHKIVRAHGNTAEYAPFLAVLFLYFGAHDPSRAIL ALIVAATVCRCLLVVGLLAWPTMANPNPVRFVGALGTYLCGAALCIALFV
Sequences:
>Translated_130_residues MPIHPVALACTAILGLLLFGLGLVVSVTRFRCTTGSGCAPDPANGLHKIVRAHGNTAEYAPFLAVLFLYFGAHDPSRAIL ALIVAATVCRCLLVVGLLAWPTMANPNPVRFVGALGTYLCGAALCIALFV >Mature_129_residues PIHPVALACTAILGLLLFGLGLVVSVTRFRCTTGSGCAPDPANGLHKIVRAHGNTAEYAPFLAVLFLYFGAHDPSRAILA LIVAATVCRCLLVVGLLAWPTMANPNPVRFVGALGTYLCGAALCIALFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13532; Mature: 13401
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIHPVALACTAILGLLLFGLGLVVSVTRFRCTTGSGCAPDPANGLHKIVRAHGNTAEYA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHH PFLAVLFLYFGAHDPSRAILALIVAATVCRCLLVVGLLAWPTMANPNPVRFVGALGTYLC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GAALCIALFV HHHHHHHHHC >Mature Secondary Structure PIHPVALACTAILGLLLFGLGLVVSVTRFRCTTGSGCAPDPANGLHKIVRAHGNTAEYA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHH PFLAVLFLYFGAHDPSRAILALIVAATVCRCLLVVGLLAWPTMANPNPVRFVGALGTYLC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GAALCIALFV HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA