| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067455
Identifier: 78067455
GI number: 78067455
Start: 3119672
End: 3120355
Strand: Direct
Name: 78067455
Synonym: Bcep18194_A5986
Alternate gene names: NA
Gene position: 3119672-3120355 (Clockwise)
Preceding gene: 78067452
Following gene: 78067456
Centisome position: 84.45
GC content: 70.32
Gene sequence:
>684_bases ATGTCCCTGCATATCGGCTTTCTCGTGTTTCCGGGCGTCCAGCAACTCGATCTCACCGGCCCGCACGACGTGCTCGCGTC GCTGCCCGACGCAAGCGTTCATCTGGTCTGGAAGTCGCGCGACGCCGTCGCGTCGAGCAGCGAGCTGGCGCTCGCGCCGA CCTGCACGTTCGACGACTGTCCGCCGCTCGACGTGATCTGCATTCCGGGCGGGATCGGGATCAACGCGCTGCTGCTCGAT GCCGAAACGATCGCGTTCGTGCAGCAGCGCGCGGCCACTGCGCGCTACGTGACGTCGGTGTGCACGGGTGCGCTGCTGCT GGGTGTCGCCGGCCTGCTGCGCGGGCGGCGTGCGACGACGCACTGGGCCTTCCACTCGCTGCTCGAACCGCTCGGCGCGG TGCCGGTGTGCGAGCGCGTGGTGCGCGACGGCAACCTGATCACGGGCGGCGGCGTCACGGCCGGCATCGACTTCGCACTG ACGATCGCCGCGGAGCTGGCCGGCGAAGAAGAAGCGCAGGCGATCCAGCTGCAGCTCGAATACGCGCCCGCGCCGCCGTT CGACGCCGGTTCGCCCGACACCGCGCCGGCGGCGGTCGTGAAGCGCGTCACCGAACGGTCGGCGGCCGGCTTCGCGAAGC GCAAGGCGACGATCGAACAGGCGTTGCGTGCGATGTCGCGCTGA
Upstream 100 bases:
>100_bases GTGGGTGATATGGCAATTTCGCCAAACCCTACGCGCCTAGAATCGATCTGTCCATCCCGTGCCGGCAACGGCGCGTTCCC CTTCCAAGCGGAGTCTTCGC
Downstream 100 bases:
>100_bases ATGCGGACGCCGGGAAATTGACTTGAATACTCGAAGACTGGAAGGCGACGCGCATTCGCGCCGGAGAACCCATCGATGAA CATCATCCGCAGCGCAGCGT
Product: ThiJ/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDCPPLDVICIPGGIGINALLLD AETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATTHWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFAL TIAAELAGEEEAQAIQLQLEYAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR
Sequences:
>Translated_227_residues MSLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDCPPLDVICIPGGIGINALLLD AETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATTHWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFAL TIAAELAGEEEAQAIQLQLEYAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR >Mature_226_residues SLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDCPPLDVICIPGGIGINALLLDA ETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATTHWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFALT IAAELAGEEEAQAIQLQLEYAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23703; Mature: 23572
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDC CEEEEEEEEECCCCEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC PPLDVICIPGGIGINALLLDAETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATT CCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFALTIAAELAGEEEAQAIQLQLE HHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE YAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDC EEEEEEEEECCCCEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC PPLDVICIPGGIGINALLLDAETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATT CCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFALTIAAELAGEEEAQAIQLQLE HHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE YAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA