Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78067455

Identifier: 78067455

GI number: 78067455

Start: 3119672

End: 3120355

Strand: Direct

Name: 78067455

Synonym: Bcep18194_A5986

Alternate gene names: NA

Gene position: 3119672-3120355 (Clockwise)

Preceding gene: 78067452

Following gene: 78067456

Centisome position: 84.45

GC content: 70.32

Gene sequence:

>684_bases
ATGTCCCTGCATATCGGCTTTCTCGTGTTTCCGGGCGTCCAGCAACTCGATCTCACCGGCCCGCACGACGTGCTCGCGTC
GCTGCCCGACGCAAGCGTTCATCTGGTCTGGAAGTCGCGCGACGCCGTCGCGTCGAGCAGCGAGCTGGCGCTCGCGCCGA
CCTGCACGTTCGACGACTGTCCGCCGCTCGACGTGATCTGCATTCCGGGCGGGATCGGGATCAACGCGCTGCTGCTCGAT
GCCGAAACGATCGCGTTCGTGCAGCAGCGCGCGGCCACTGCGCGCTACGTGACGTCGGTGTGCACGGGTGCGCTGCTGCT
GGGTGTCGCCGGCCTGCTGCGCGGGCGGCGTGCGACGACGCACTGGGCCTTCCACTCGCTGCTCGAACCGCTCGGCGCGG
TGCCGGTGTGCGAGCGCGTGGTGCGCGACGGCAACCTGATCACGGGCGGCGGCGTCACGGCCGGCATCGACTTCGCACTG
ACGATCGCCGCGGAGCTGGCCGGCGAAGAAGAAGCGCAGGCGATCCAGCTGCAGCTCGAATACGCGCCCGCGCCGCCGTT
CGACGCCGGTTCGCCCGACACCGCGCCGGCGGCGGTCGTGAAGCGCGTCACCGAACGGTCGGCGGCCGGCTTCGCGAAGC
GCAAGGCGACGATCGAACAGGCGTTGCGTGCGATGTCGCGCTGA

Upstream 100 bases:

>100_bases
GTGGGTGATATGGCAATTTCGCCAAACCCTACGCGCCTAGAATCGATCTGTCCATCCCGTGCCGGCAACGGCGCGTTCCC
CTTCCAAGCGGAGTCTTCGC

Downstream 100 bases:

>100_bases
ATGCGGACGCCGGGAAATTGACTTGAATACTCGAAGACTGGAAGGCGACGCGCATTCGCGCCGGAGAACCCATCGATGAA
CATCATCCGCAGCGCAGCGT

Product: ThiJ/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDCPPLDVICIPGGIGINALLLD
AETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATTHWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFAL
TIAAELAGEEEAQAIQLQLEYAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR

Sequences:

>Translated_227_residues
MSLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDCPPLDVICIPGGIGINALLLD
AETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATTHWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFAL
TIAAELAGEEEAQAIQLQLEYAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR
>Mature_226_residues
SLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDCPPLDVICIPGGIGINALLLDA
ETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATTHWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFALT
IAAELAGEEEAQAIQLQLEYAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23703; Mature: 23572

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDC
CEEEEEEEEECCCCEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC
PPLDVICIPGGIGINALLLDAETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATT
CCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFALTIAAELAGEEEAQAIQLQLE
HHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE
YAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLHIGFLVFPGVQQLDLTGPHDVLASLPDASVHLVWKSRDAVASSSELALAPTCTFDDC
EEEEEEEEECCCCEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC
PPLDVICIPGGIGINALLLDAETIAFVQQRAATARYVTSVCTGALLLGVAGLLRGRRATT
CCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HWAFHSLLEPLGAVPVCERVVRDGNLITGGGVTAGIDFALTIAAELAGEEEAQAIQLQLE
HHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE
YAPAPPFDAGSPDTAPAAVVKRVTERSAAGFAKRKATIEQALRAMSR
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA