| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yheT [H]
Identifier: 78067435
GI number: 78067435
Start: 3095193
End: 3096230
Strand: Direct
Name: yheT [H]
Synonym: Bcep18194_A5966
Alternate gene names: 78067435
Gene position: 3095193-3096230 (Clockwise)
Preceding gene: 78067434
Following gene: 78067436
Centisome position: 83.79
GC content: 68.98
Gene sequence:
>1038_bases ATGAGTACGGCTTCTCCGCCCACCTCGCCGCTGACCGGGGCTCCGGCCCCCGACGACGACATTCTGCGCTATCGCGCACC ACGCTGGCTGCCTAACAGCCATGCGCAAACCATCGTGCCCGCGCTGTTCGCGCGGCGTCCCGTCGTCGCTTACCGACGAG AGCGATGGGAAACCCCCGACCACGACTTCATCGATCTCGACTGGGTCGCGCATCTCGACAGCGCGGCGCCGCGGCCCGAT GCGCCGCTATTCGTGCTGTTCCACGGCCTCGAAGGCAGCTCCGGCTCGCACTACGCGCTCGCGATGATGGCCGCCGCGCG CGCGAAGGGCTGGCACGCCGTCGTGCCGCACTTCCGCAGTTGCAGCGGCGAGATCAACCGCCAGCCGCGCTTCTACCATC TCGCCGACAGCGCCGAAGTCGACTGGATCCTGCGCCGGCTTGCCGCGCAGCATCGCGGGCCGCTCGTCGCGGCCGGCGTG TCGCTCGGCGGCAATGTGCTGCTGCGTTGGCTCGGCGAGCATCGCAGCGACACGTCAATCCTGCGGGCCGCCGCCGCGAT CTCGACGCCGATCGACGTGCATGCCGGCGGGCGCGCGCTATCGCAAGGCTTTGCGATGGTCTACACGCGCAGCTTCCTGA AAACGCTCAAGCGCAAGGCGCTCGCGAAACTCGACCAGTACCCGGGGCTGTTCGACCGTGAAGCCATGCTGCAGGCCGTG ACGATGCGCGACTTCGACGAGATCGTGACCGCGCCGCTGCACGGTTTCGCGGATGCGGACGACTACTGGACCCAGGCGAC GACACGGCCGCTGCTACCCGCGATCGACGTGCCGACGCTGATTCTCAACGCCCGCAACGACCCGTTCCTGCCCGAATCGG CGCTGCCCGGCCCGGCCGACGTATCGCCGGCCGTCGAGCTCGACCAGCCCGCGGCAGGCGGCCATGCGGGATTCATGACC GGGCCGTTCCCCGGCCGCCTCGACTGGCTGTCGGCGCGGGTGTTCGGCTATTGCTCCAAATTCGTCGACCATGGATGA
Upstream 100 bases:
>100_bases ATTCCTGAACAAGCGGCCGGACAATTCGCCGCGAAGATCCGTCACGGGCAGGGTCCGCTGCACTGACGAAAAGACGAAGC AACGCATACGCGGGGCGATC
Downstream 100 bases:
>100_bases CATCGTCAGGCAGGCCCTCGCCAAATGGCCGAACGTGCCGCACTGTACCGGCTGGCTGCTGCTCGATCGGCGCGGCGAAT GGCGGCTGCGCGACGACGCG
Product: Alpha/beta hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSTASPPTSPLTGAPAPDDDILRYRAPRWLPNSHAQTIVPALFARRPVVAYRRERWETPDHDFIDLDWVAHLDSAAPRPD APLFVLFHGLEGSSGSHYALAMMAAARAKGWHAVVPHFRSCSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVAAGV SLGGNVLLRWLGEHRSDTSILRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKALAKLDQYPGLFDREAMLQAV TMRDFDEIVTAPLHGFADADDYWTQATTRPLLPAIDVPTLILNARNDPFLPESALPGPADVSPAVELDQPAAGGHAGFMT GPFPGRLDWLSARVFGYCSKFVDHG
Sequences:
>Translated_345_residues MSTASPPTSPLTGAPAPDDDILRYRAPRWLPNSHAQTIVPALFARRPVVAYRRERWETPDHDFIDLDWVAHLDSAAPRPD APLFVLFHGLEGSSGSHYALAMMAAARAKGWHAVVPHFRSCSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVAAGV SLGGNVLLRWLGEHRSDTSILRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKALAKLDQYPGLFDREAMLQAV TMRDFDEIVTAPLHGFADADDYWTQATTRPLLPAIDVPTLILNARNDPFLPESALPGPADVSPAVELDQPAAGGHAGFMT GPFPGRLDWLSARVFGYCSKFVDHG >Mature_344_residues STASPPTSPLTGAPAPDDDILRYRAPRWLPNSHAQTIVPALFARRPVVAYRRERWETPDHDFIDLDWVAHLDSAAPRPDA PLFVLFHGLEGSSGSHYALAMMAAARAKGWHAVVPHFRSCSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVAAGVS LGGNVLLRWLGEHRSDTSILRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKALAKLDQYPGLFDREAMLQAVT MRDFDEIVTAPLHGFADADDYWTQATTRPLLPAIDVPTLILNARNDPFLPESALPGPADVSPAVELDQPAAGGHAGFMTG PFPGRLDWLSARVFGYCSKFVDHG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=329, Percent_Identity=30.3951367781155, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI194578891, Length=330, Percent_Identity=30, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI23397659, Length=280, Percent_Identity=23.9285714285714, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI23397661, Length=280, Percent_Identity=23.9285714285714, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1789752, Length=319, Percent_Identity=38.871473354232, Blast_Score=218, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17566110, Length=308, Percent_Identity=27.5974025974026, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71985405, Length=310, Percent_Identity=25.8064516129032, Blast_Score=101, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6323866, Length=247, Percent_Identity=24.6963562753036, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319655, Length=270, Percent_Identity=28.5185185185185, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325162, Length=291, Percent_Identity=27.8350515463918, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI24652003, Length=319, Percent_Identity=31.0344827586207, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI281398151, Length=319, Percent_Identity=31.0344827586207, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 37747; Mature: 37616
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTASPPTSPLTGAPAPDDDILRYRAPRWLPNSHAQTIVPALFARRPVVAYRRERWETPD CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCC HDFIDLDWVAHLDSAAPRPDAPLFVLFHGLEGSSGSHYALAMMAAARAKGWHAVVPHFRS CCEEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHH CSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVAAGVSLGGNVLLRWLGEHRSDTSI CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHH LRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKALAKLDQYPGLFDREAMLQAV HHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TMRDFDEIVTAPLHGFADADDYWTQATTRPLLPAIDVPTLILNARNDPFLPESALPGPAD HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC VSPAVELDQPAAGGHAGFMTGPFPGRLDWLSARVFGYCSKFVDHG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STASPPTSPLTGAPAPDDDILRYRAPRWLPNSHAQTIVPALFARRPVVAYRRERWETPD CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCC HDFIDLDWVAHLDSAAPRPDAPLFVLFHGLEGSSGSHYALAMMAAARAKGWHAVVPHFRS CCEEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHH CSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVAAGVSLGGNVLLRWLGEHRSDTSI CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHH LRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKALAKLDQYPGLFDREAMLQAV HHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TMRDFDEIVTAPLHGFADADDYWTQATTRPLLPAIDVPTLILNARNDPFLPESALPGPAD HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC VSPAVELDQPAAGGHAGFMTGPFPGRLDWLSARVFGYCSKFVDHG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]