| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067371
Identifier: 78067371
GI number: 78067371
Start: 3022433
End: 3023728
Strand: Direct
Name: 78067371
Synonym: Bcep18194_A5902
Alternate gene names: NA
Gene position: 3022433-3023728 (Clockwise)
Preceding gene: 78067370
Following gene: 78067373
Centisome position: 81.82
GC content: 71.45
Gene sequence:
>1296_bases ATGGGTGACGGCAGGACGCGGCGCAAGGCGCCGCCGGAACGACAACAGCACGACGACGCCAACGCGCCGCACGCCGACGG GCAATTCGACCTGTTCGGCGTGCCGGCCGACGCTGCACGCGCGTCGCCCGGGAACGACGGCCCGCCTGCCGACACCGACG AACACGTGACACCGGACGCATCTGACGACGCGCAACCGGCACCGCGTACCCGCACCCACTCCCGTTCTTCAGACGAAACG CCGCCCGACGCTTCCGGCCTGCTGTGGGATGAACCGTCCCCGCCCGCCGCGCCGCCGAAGAAAGGCCGGCGCCGGCGCGG CGTGCTGCCCGCGCCGATCGCGCCGGATGTGGCCGACGCAGCGGCCGGCCTGCCGCCGAACGTCCGGCTCGGCACGTCGT CGTGGACCTTCCCCGGCTGGGACGGCATCGTCTACGACGGCGACTTCGCACAGACCAAGCTGTCGCGCGAAGGGCTCGAA GCGTATGGCGCACATCCGTTGCTGAAAAGCGTGAGCCTCGACCGGTCGTTCTACGGCCCGCTTTCGGTGGCCGACTACCT GCGCTACGCACAGCAGGTGCCCGACGATTTCCGCTTCGTGGTGAAGGCGCCCGCCTCCGTGACCGATGCGGTGATCCGCG GCCGGCGCGGCGAGCCGTCGGGGCCGAACCCGACCTTCCTCGACGCGGATCTCGCCACCCGGGAATTCGTGCAGCCGTGC CTCGACGGGCTCGGCCGGAAGGCCGGCGTACTCGTGTTCCAGTTCTCGCCGCTGCCCGATCAGTTGCTCGCCCAGCCGGC CGAACTGATCGACCGGCTCGCCGCGTTCTTCGCGGCGTTGCCGCCGCTGCCGCCGGAAGCCGACGGCACCCGCTATGCGA TCGAGATTCGCGACGCGAGCCTGCTCACGCCGCGCTTCATCCGCGCGCTCGCCGCACTCGGCGTGCGCTACTGCGTCGGC CTGCACGCGCGGATGCCCGACCCGCTGCGCCAGGCCGCCGCGCTCGCGCTGCTCGACGGCGACGCGCCGGGCCCGCTGAT CGTGCGCTGGAGCCTGCACGGAGGCTTCAAGTACGAACAGGCGAAAGCGAAGTACGAGCCGTTCGACAAGCTCGTCGACG AGGATCCGGCCACGCGTTCAGCGCTCGCCGAACTGGCCGCGCGCTATGCGCTGGCCGGGCAGCCGGTGATCATCACGATC AACAACAAGGCGGAAGGCTCCGCGCCGCTGTCGTGCATCGCGCTTGCGCGCGAGATCGCCGCCGCGTGCGCGCAGTGGCG CAACGAGGCGGCTTGA
Upstream 100 bases:
>100_bases GCCGCAAGGCCGGGCAGAGCGCAAAAACGCTGCCGTGGTCGCGGCGCTATATGTACGAACACGCGCTGCCGCGCTAGGCG GCGCTTCACGCTGGGCATGC
Downstream 100 bases:
>100_bases TCCCGACTGGATACCGGCTTGCGCCGGTCGCGGTCACATTTACGCGCCGCGCAGCGACTTCAGCCGGTGCGAGAACTTCT GCCGGAATTTCGCGAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MGDGRTRRKAPPERQQHDDANAPHADGQFDLFGVPADAARASPGNDGPPADTDEHVTPDASDDAQPAPRTRTHSRSSDET PPDASGLLWDEPSPPAAPPKKGRRRRGVLPAPIAPDVADAAAGLPPNVRLGTSSWTFPGWDGIVYDGDFAQTKLSREGLE AYGAHPLLKSVSLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVIRGRRGEPSGPNPTFLDADLATREFVQPC LDGLGRKAGVLVFQFSPLPDQLLAQPAELIDRLAAFFAALPPLPPEADGTRYAIEIRDASLLTPRFIRALAALGVRYCVG LHARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYALAGQPVIITI NNKAEGSAPLSCIALAREIAAACAQWRNEAA
Sequences:
>Translated_431_residues MGDGRTRRKAPPERQQHDDANAPHADGQFDLFGVPADAARASPGNDGPPADTDEHVTPDASDDAQPAPRTRTHSRSSDET PPDASGLLWDEPSPPAAPPKKGRRRRGVLPAPIAPDVADAAAGLPPNVRLGTSSWTFPGWDGIVYDGDFAQTKLSREGLE AYGAHPLLKSVSLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVIRGRRGEPSGPNPTFLDADLATREFVQPC LDGLGRKAGVLVFQFSPLPDQLLAQPAELIDRLAAFFAALPPLPPEADGTRYAIEIRDASLLTPRFIRALAALGVRYCVG LHARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYALAGQPVIITI NNKAEGSAPLSCIALAREIAAACAQWRNEAA >Mature_430_residues GDGRTRRKAPPERQQHDDANAPHADGQFDLFGVPADAARASPGNDGPPADTDEHVTPDASDDAQPAPRTRTHSRSSDETP PDASGLLWDEPSPPAAPPKKGRRRRGVLPAPIAPDVADAAAGLPPNVRLGTSSWTFPGWDGIVYDGDFAQTKLSREGLEA YGAHPLLKSVSLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVIRGRRGEPSGPNPTFLDADLATREFVQPCL DGLGRKAGVLVFQFSPLPDQLLAQPAELIDRLAAFFAALPPLPPEADGTRYAIEIRDASLLTPRFIRALAALGVRYCVGL HARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYALAGQPVIITIN NKAEGSAPLSCIALAREIAAACAQWRNEAA
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46127; Mature: 45996
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDGRTRRKAPPERQQHDDANAPHADGQFDLFGVPADAARASPGNDGPPADTDEHVTPDA CCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCC SDDAQPAPRTRTHSRSSDETPPDASGLLWDEPSPPAAPPKKGRRRRGVLPAPIAPDVADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHH AAGLPPNVRLGTSSWTFPGWDGIVYDGDFAQTKLSREGLEAYGAHPLLKSVSLDRSFYGP HCCCCCCCEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCC LSVADYLRYAQQVPDDFRFVVKAPASVTDAVIRGRRGEPSGPNPTFLDADLATREFVQPC HHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHH LDGLGRKAGVLVFQFSPLPDQLLAQPAELIDRLAAFFAALPPLPPEADGTRYAIEIRDAS HHHCCCCCCEEEEEECCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC LLTPRFIRALAALGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQ CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCHHH AKAKYEPFDKLVDEDPATRSALAELAARYALAGQPVIITINNKAEGSAPLSCIALAREIA HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH AACAQWRNEAA HHHHHHHHCCC >Mature Secondary Structure GDGRTRRKAPPERQQHDDANAPHADGQFDLFGVPADAARASPGNDGPPADTDEHVTPDA CCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCC SDDAQPAPRTRTHSRSSDETPPDASGLLWDEPSPPAAPPKKGRRRRGVLPAPIAPDVADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHH AAGLPPNVRLGTSSWTFPGWDGIVYDGDFAQTKLSREGLEAYGAHPLLKSVSLDRSFYGP HCCCCCCCEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCC LSVADYLRYAQQVPDDFRFVVKAPASVTDAVIRGRRGEPSGPNPTFLDADLATREFVQPC HHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHH LDGLGRKAGVLVFQFSPLPDQLLAQPAELIDRLAAFFAALPPLPPEADGTRYAIEIRDAS HHHCCCCCCEEEEEECCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC LLTPRFIRALAALGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQ CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCHHH AKAKYEPFDKLVDEDPATRSALAELAARYALAGQPVIITINNKAEGSAPLSCIALAREIA HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH AACAQWRNEAA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA