| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is braE [H]
Identifier: 78067297
GI number: 78067297
Start: 2942133
End: 2943302
Strand: Reverse
Name: braE [H]
Synonym: Bcep18194_A5828
Alternate gene names: 78067297
Gene position: 2943302-2942133 (Counterclockwise)
Preceding gene: 78067298
Following gene: 78067296
Centisome position: 79.68
GC content: 62.99
Gene sequence:
>1170_bases ATGACATCCATTCAACCGATCGAATCCTCGACGTCGCTCGTCGAAGAGCGCAACACCACCAAGACCATCATCATCGGTGT CCTGACCGCGGTCTTCGTGATCGCGGCGCCGATCATCATCGGCTCGGCCGGCGGCAACTACTGGGTCCGTGTGCTCGACT TCGCGATGCTGTACGTGATGCTCGCGCTGGGTCTTAACGTGGTGGTCGGCTTCGCCGGCCTGCTCGACCTGGGCTACATC GCGTTCTACGCGGTGGGCGCGTACACGGCGGCGTTGTTGAGCTCGCCGCACCTGAGCTCGCAATTCGAGTGGATCGCGGC GCTGGCGCCGAACGGATTGCATTTTCCGTTCTTCGTCATCGTGCCGATCGCGATGGCACTGGCGGCGACCTTCGGGATCC TGCTCGGCGCGCCGACGTTGCGCCTGCGCGGCGACTACCTGGCGATCGTGACGCTCGGCTTCGGTGAAATCGTCCGGATC TTCATGAACAACCTCGACCGTCCGGTGAACATCACCAACGGCCCGAAGGGGATCACGGGCATCGATCCGGTGCACATCGG CGACTTCAGCCTCGCGCAGACCCATTCGCTGTTCGGGATCCAGCTGCCGTCGGTCTACATGTATTACTACCTGTTCGTGC TGTGCTCGCTGCTGGTGATTTGGGTGTGTACGCGCCTGCAGCACTCGCGTATCGGCCGCGCATGGGCGGCGATCCGCGAA GACGAAATCGCGGCGAAGGCGATGGGCATCAACACCCGTAACGTGAAGCTGCTCGCATTCGCGATGGGCGCGTCGTTCGG CGGCCTGTCGGGTGCGATGTTCGGTTCGTTCCAGGGCTTCGTGTCGCCGGAATCGTTCACGTTCTGGGAGTCGATCGTCG TGCTCGCCTGCGTGGTGCTCGGCGGCATGGGCCACATCCCGGGCGTGATCCTGGGTGCGGTGCTGCTCGCGATCTTCCCG GAATTCCTGCGCTCGACGATGAGCCCGCTGCAGCACGCGATCTTCGGCCATGACGTCGTCGATACCGAAGTGATCCGTCA GGCGCTGTACGGCCTCGCGATGGTGGTCATCATGCTGTACCGCTCGGAAGGCCTGTGGCCCGCACCGAAGCATGAGGACA AGATCGCGAAACTGGCGAAGCGCAACAGCAAGAAGCCGGTTCGTGCTTAA
Upstream 100 bases:
>100_bases GTTCGCCTTCATCGTGCTGATCATCGTGCTGGTGTTCCGTCCGTCCGGCCTGCTGGGCGAACGTGTCGCGGATCGCGCGT AACGGAAGGGAGCAAACAAC
Downstream 100 bases:
>100_bases TCGACGGACACAGGGGATATACACATGAGCGACAAACAAATCCGACTGTCCGTCAAAGGCGTGAACAAGCGCTTCGGTGG CCTGCAGGCGCTGTCCGACG
Product: branched chain amino acid ABC transporter inner membrane protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTSIQPIESSTSLVEERNTTKTIIIGVLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLSSQFEWIAALAPNGLHFPFFVIVPIAMALAATFGILLGAPTLRLRGDYLAIVTLGFGEIVRI FMNNLDRPVNITNGPKGITGIDPVHIGDFSLAQTHSLFGIQLPSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFP EFLRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDKIAKLAKRNSKKPVRA
Sequences:
>Translated_389_residues MTSIQPIESSTSLVEERNTTKTIIIGVLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLSSQFEWIAALAPNGLHFPFFVIVPIAMALAATFGILLGAPTLRLRGDYLAIVTLGFGEIVRI FMNNLDRPVNITNGPKGITGIDPVHIGDFSLAQTHSLFGIQLPSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFP EFLRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDKIAKLAKRNSKKPVRA >Mature_388_residues TSIQPIESSTSLVEERNTTKTIIIGVLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA FYAVGAYTAALLSSPHLSSQFEWIAALAPNGLHFPFFVIVPIAMALAATFGILLGAPTLRLRGDYLAIVTLGFGEIVRIF MNNLDRPVNITNGPKGITGIDPVHIGDFSLAQTHSLFGIQLPSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIRED EIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVLGGMGHIPGVILGAVLLAIFPE FLRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDKIAKLAKRNSKKPVRA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=348, Percent_Identity=41.9540229885057, Blast_Score=210, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 42098; Mature: 41967
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIQPIESSTSLVEERNTTKTIIIGVLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVM CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLSSQFEWIAALAPNGLHFPFFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHH VPIAMALAATFGILLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPVHIGDFSLAQTHSLFGIQLPSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIRE CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GGMGHIPGVILGAVLLAIFPEFLRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVVIMLY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RSEGLWPAPKHEDKIAKLAKRNSKKPVRA HCCCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSIQPIESSTSLVEERNTTKTIIIGVLTAVFVIAAPIIIGSAGGNYWVRVLDFAMLYVM CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLSSQFEWIAALAPNGLHFPFFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHH VPIAMALAATFGILLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNITNGPKGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPVHIGDFSLAQTHSLFGIQLPSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIRE CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGSFQGFVSPESFTFWESIVVLACVVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GGMGHIPGVILGAVLLAIFPEFLRSTMSPLQHAIFGHDVVDTEVIRQALYGLAMVVIMLY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RSEGLWPAPKHEDKIAKLAKRNSKKPVRA HCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]