| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067294
Identifier: 78067294
GI number: 78067294
Start: 2939649
End: 2940320
Strand: Reverse
Name: 78067294
Synonym: Bcep18194_A5825
Alternate gene names: NA
Gene position: 2940320-2939649 (Counterclockwise)
Preceding gene: 78067295
Following gene: 78067290
Centisome position: 79.59
GC content: 65.92
Gene sequence:
>672_bases ATGAGTCTGGACTACGGTTTCGTGAAGGCGAAGGTGACATCGGTGGCGAAGCTGAAGGGCTCGCCGCACGGCAGCGAGAT CCAGTATCACATTCACCTGACGCTGGCGTTGCCCGGAGGCGACTGGGACGTCGCGATCAACGTCGGCACCAACGACGCGG ACGACCTGCTGAACTACAAGCTCGTCTACGATTTCCACCACCCGATCACGCAGACGCTTGCAGCCGCGGCCGAAGGCTAT ACGGACCTGACGGGGCAGGCCGCGCTGCCCGCGCTAGACTACATGCGCAGCGACATCCTGAACGACACGGGCACATGGCG CCCGAGCGCCGTGATGGACGGCACGGAGAATCAGGAGCCGATCCCGTCGCTGCTGCGGCTGGTGAACGCCGCGCAGTCGC AGGGGCTCGACGTCGTCGTGTTCGGCCGCTCGTATACCGAAGGCAACGGCATCCACGACACGCACATGAACCAGGGGTCG ACCGGCTCGAACTACCTGCATCGCGCCGGCGACGACCACAACGACCACAACGACATCTGGCAGGACGGTGCGCTGATCGT GCGCGTGAGCGACACGCAGTGGGCCGCGTATTTCGCCGCGTTCGAGCAGCAGGCCGTGCCGACCGACGCGCTCGGCAATC CGCTGCCGGGCGCGGGGCCGATCACGCGTTGA
Upstream 100 bases:
>100_bases GTTGCTGGTTGCTGGTTGCCGGTCGCCCGCAGCTGGTCGCCCGCAAACCGACACACGGGCCCTGTAGCATCGGCGGCCCA TCGGCACACGGAGAACACGC
Downstream 100 bases:
>100_bases GATCGCGGGCTGCCGGCCTTCGCGTCATGCGGCCGGCAGCGTCTTGCCGAACGAGATGCGTTCCTCGACGCGATAGCCGA GCGCCGCGTAGAAGCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSLDYGFVKAKVTSVAKLKGSPHGSEIQYHIHLTLALPGGDWDVAINVGTNDADDLLNYKLVYDFHHPITQTLAAAAEGY TDLTGQAALPALDYMRSDILNDTGTWRPSAVMDGTENQEPIPSLLRLVNAAQSQGLDVVVFGRSYTEGNGIHDTHMNQGS TGSNYLHRAGDDHNDHNDIWQDGALIVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR
Sequences:
>Translated_223_residues MSLDYGFVKAKVTSVAKLKGSPHGSEIQYHIHLTLALPGGDWDVAINVGTNDADDLLNYKLVYDFHHPITQTLAAAAEGY TDLTGQAALPALDYMRSDILNDTGTWRPSAVMDGTENQEPIPSLLRLVNAAQSQGLDVVVFGRSYTEGNGIHDTHMNQGS TGSNYLHRAGDDHNDHNDIWQDGALIVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR >Mature_222_residues SLDYGFVKAKVTSVAKLKGSPHGSEIQYHIHLTLALPGGDWDVAINVGTNDADDLLNYKLVYDFHHPITQTLAAAAEGYT DLTGQAALPALDYMRSDILNDTGTWRPSAVMDGTENQEPIPSLLRLVNAAQSQGLDVVVFGRSYTEGNGIHDTHMNQGST GSNYLHRAGDDHNDHNDIWQDGALIVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR
Specific function: Unknown
COG id: COG5634
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24099; Mature: 23968
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDYGFVKAKVTSVAKLKGSPHGSEIQYHIHLTLALPGGDWDVAINVGTNDADDLLNYK CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHEEE LVYDFHHPITQTLAAAAEGYTDLTGQAALPALDYMRSDILNDTGTWRPSAVMDGTENQEP EEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCH IPSLLRLVNAAQSQGLDVVVFGRSYTEGNGIHDTHMNQGSTGSNYLHRAGDDHNDHNDIW HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH QDGALIVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR CCCEEEEEECCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure SLDYGFVKAKVTSVAKLKGSPHGSEIQYHIHLTLALPGGDWDVAINVGTNDADDLLNYK CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHEEE LVYDFHHPITQTLAAAAEGYTDLTGQAALPALDYMRSDILNDTGTWRPSAVMDGTENQEP EEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCH IPSLLRLVNAAQSQGLDVVVFGRSYTEGNGIHDTHMNQGSTGSNYLHRAGDDHNDHNDIW HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH QDGALIVRVSDTQWAAYFAAFEQQAVPTDALGNPLPGAGPITR CCCEEEEEECCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA