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The map label for this gene is yobA [H]

Identifier: 78067287

GI number: 78067287

Start: 2934019

End: 2934393

Strand: Reverse

Name: yobA [H]

Synonym: Bcep18194_A5818

Alternate gene names: 78067287

Gene position: 2934393-2934019 (Counterclockwise)

Preceding gene: 78067290

Following gene: 78067286

Centisome position: 79.43

GC content: 70.4

Gene sequence:

>375_bases
ATGTCTTTTGCTTCGTTCCCGTTCGGCCGCAAGGCCGCTGCCGTCGTCGTGGCCGCCACCGTCTCGTCGGCCGCGTTCGC
GCACGCGCACCTTGCGAAGAGCGATCCGGCGGCGGGCGCGGCGGTGGCTGCCGCACCGGCCGCCGTCACGATCGACTTCA
CCGAGCCGCTGGAGCCGGCGTTCAGCTCGATCGTCGTCGTCGACGGCGACGGCAAGACGGTGTCGGACGGCCGTGCGCGC
ATCGACGCGTCGAACCGCAAGCAGATGACGGTGCCGCTCACGGCGGTCGGCACTGGTGCCTATACGGTGAAATGGGTGGC
CGTCGCGACCGACGGGCACCGCACGCAGGGCGCGTACGGCTTCAGCGTGAAGTGA

Upstream 100 bases:

>100_bases
ATCAAGCGATGGCGCGCGACCGGCATGAACGTGCATGCGCTGGTAAGCTGCCGGTACGCCGCGCGGGGCGCGGCGCCCGT
TCATTCTTCACGGAAAGCCC

Downstream 100 bases:

>100_bases
CGCAACGGCGGCGGCAGGCCCGTGCCAGGGTTGCCGTCGCCCTCATCCGACAGGGAGTTTCCCGCATGAACCCGACGACG
CTCGACGCACTCGCCGATTT

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSFASFPFGRKAAAVVVAATVSSAAFAHAHLAKSDPAAGAAVAAAPAAVTIDFTEPLEPAFSSIVVVDGDGKTVSDGRAR
IDASNRKQMTVPLTAVGTGAYTVKWVAVATDGHRTQGAYGFSVK

Sequences:

>Translated_124_residues
MSFASFPFGRKAAAVVVAATVSSAAFAHAHLAKSDPAAGAAVAAAPAAVTIDFTEPLEPAFSSIVVVDGDGKTVSDGRAR
IDASNRKQMTVPLTAVGTGAYTVKWVAVATDGHRTQGAYGFSVK
>Mature_123_residues
SFASFPFGRKAAAVVVAATVSSAAFAHAHLAKSDPAAGAAVAAAPAAVTIDFTEPLEPAFSSIVVVDGDGKTVSDGRARI
DASNRKQMTVPLTAVGTGAYTVKWVAVATDGHRTQGAYGFSVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=116, Percent_Identity=39.6551724137931, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 12509; Mature: 12378

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASFPFGRKAAAVVVAATVSSAAFAHAHLAKSDPAAGAAVAAAPAAVTIDFTEPLEPA
CCCCCCCCCCCCEEEEEEEECCCCHHHHEECCCCCCCCCEEEECCCEEEEEECCCCCCCC
FSSIVVVDGDGKTVSDGRARIDASNRKQMTVPLTAVGTGAYTVKWVAVATDGHRTQGAYG
CCEEEEECCCCCEECCCCEEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCEEE
FSVK
EECC
>Mature Secondary Structure 
SFASFPFGRKAAAVVVAATVSSAAFAHAHLAKSDPAAGAAVAAAPAAVTIDFTEPLEPA
CCCCCCCCCCCEEEEEEEECCCCHHHHEECCCCCCCCCEEEECCCEEEEEECCCCCCCC
FSSIVVVDGDGKTVSDGRARIDASNRKQMTVPLTAVGTGAYTVKWVAVATDGHRTQGAYG
CCEEEEECCCCCEECCCCEEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCEEE
FSVK
EECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]