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The map label for this gene is lptF [H]

Identifier: 78067267

GI number: 78067267

Start: 2912104

End: 2913195

Strand: Direct

Name: lptF [H]

Synonym: Bcep18194_A5798

Alternate gene names: 78067267

Gene position: 2912104-2913195 (Clockwise)

Preceding gene: 78067263

Following gene: 78067268

Centisome position: 78.83

GC content: 63.28

Gene sequence:

>1092_bases
ATGATCTTCGAACGCTCCCTCCAGCGCGAGCTTGCGTATACGGCTGGCGCCGTGTTCATGGTGCTGCTCACGATCATGCT
CACGACGATGATGATCCGCATCGTCGGCTACGCCGCGTCCGGTGAAATCGATCCGCGGGACGTCCTCGTGCTGATCGGCC
TCACCGTGATCGGCTACCTCGCCGTGATGCTCGTCGTCACGCTGTTCGTGTCGATCCTGTTCGTGCTGACCCGGTGGTAC
CGGGACTCCGAAATGGTCGTGTGGCTCGCGTCGGGCGTGAGCCTCACGCGCCTCATCAAGCCGATCGGCGTGTTTGCCAC
GCCGATCATCCTGCTGATCGCCTTCTTCGCATTCGTCGGCTGGCCGTGGTCGAACCAGCAAAGCAAGATGATCAAGGCAC
GCTTCCAGCAGCGCGACGAGATCTCGCTGCTCGCGCCGGGCCAGTTCCGCGAGTCGGCCACGAACCACCGCGTGTTCTTC
ATCGAGAAGATGACGCCCGACCAGAGCAAGGTGCAGAACGTGTTCGTGACCTCGACCGAGAACGGCAAGGTCAACGTGGT
CGTGTCGCAGACAGGCCATACGGAAACGCGCGACGGCAGCCGCTTCGTCGTCCTGGAGGACGGCCGCCGCTACGACGGCA
CGCCCGGCCAGCCGAACTTCAAGATCATGGAGTTCGAGCGCTACGGCGTGAAGATCACGAGCACCCCGGTCACCAACGTG
CCGACCACCAACAGCACGCCGACGCCGGACCTGCTGCGCAACCCGACGAACGACAACCTCGCGGAATTCGCGTGGCGCGC
GGGACTGCCGCTGATCGCGATCAACCTGATGGTGCTCGGCATTCCGCTGTCGTACCAGAACCCGCGCCGCAGCCGCACGA
TCAACCTCGTGATGGCCGTGCTGATCTACCTCACGTACTCGAACCTGCTGAACGTGGTGCAGTCGCAGATCGAACAGGGC
AAGATGTCGTTCGGTGTCGGGCTCGTTGGCCTGCATCTGGTCGTCGCGGTGATCGTCGCGTTCATCTTCTGGTTGCGCGT
GCGCAATCGTCCGCTGTTTACACGCGCGCTGTTCGGCCGCTCGGGAGCATGA

Upstream 100 bases:

>100_bases
CTGGGCTAAGGATGAAAGCCGCAATTATCCGCTATTTTTCCCGTGGCGGCGCGAGCGCTCCACCACGCGTGCGCAGCCTC
CCGCCCTCTTCTCATCAAGA

Downstream 100 bases:

>100_bases
TCGATGCGGCTCTATGAAAAGTACTTCGCGCGGCAGATCTACGTCACGTTCGTCTTCATCCTGTTCGCGTTCTCGGGCCT
GTTCTTCTTCTTCGACCTGA

Product: YjgP/YjgQ like transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGWPWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFF
IEKMTPDQSKVQNVFVTSTENGKVNVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNV
PTTNSTPTPDLLRNPTNDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQSQIEQG
KMSFGVGLVGLHLVVAVIVAFIFWLRVRNRPLFTRALFGRSGA

Sequences:

>Translated_363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGWPWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFF
IEKMTPDQSKVQNVFVTSTENGKVNVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNV
PTTNSTPTPDLLRNPTNDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQSQIEQG
KMSFGVGLVGLHLVVAVIVAFIFWLRVRNRPLFTRALFGRSGA
>Mature_363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVGWPWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFF
IEKMTPDQSKVQNVFVTSTENGKVNVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNV
PTTNSTPTPDLLRNPTNDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQSQIEQG
KMSFGVGLVGLHLVVAVIVAFIFWLRVRNRPLFTRALFGRSGA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=369, Percent_Identity=30.6233062330623, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40729; Mature: 40729

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEEECCCCHHHHCEEEEEECC
NGKVNVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNV
CCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCC
PTTNSTPTPDLLRNPTNDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAV
CCCCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LIYLTYSNLLNVVQSQIEQGKMSFGVGLVGLHLVVAVIVAFIFWLRVRNRPLFTRALFGR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
SGA
CCC
>Mature Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEEECCCCHHHHCEEEEEECC
NGKVNVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNV
CCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCC
PTTNSTPTPDLLRNPTNDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAV
CCCCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LIYLTYSNLLNVVQSQIEQGKMSFGVGLVGLHLVVAVIVAFIFWLRVRNRPLFTRALFGR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
SGA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]