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The map label for this gene is ytfM [C]

Identifier: 78067239

GI number: 78067239

Start: 2886141

End: 2887955

Strand: Reverse

Name: ytfM [C]

Synonym: Bcep18194_A5770

Alternate gene names: 78067239

Gene position: 2887955-2886141 (Counterclockwise)

Preceding gene: 78067244

Following gene: 78067238

Centisome position: 78.18

GC content: 68.04

Gene sequence:

>1815_bases
TTGGCGGGGCAGTCGAACCAGCAAGCACACACGGCACATGACGCGGGCCCGCGCGTGGAACGCAATCGCGCCGGCGCCGC
GGCTCGCGCCGCGCGGGTGACCCTCGCGGGTTGCCTTGCCGCGTGCTTCGCGCTGCCGGCCCACGCGAAGTACAACGTCG
ACATCGATGCGCCGCGCTCGGTTCGCAAGCTGCTCAAGTCGCATCTCGATATCGCGCGCTTCGCGAAGCGCGACGACATC
AGCGACGACCAGTTCGACTTCCTCGTCACCGCCACGCCGCAACAGGTGCGCGACCTGACCGCGACGGCCGGCTATTTCTC
GCCGGTCGTGCGCACCGACGTGCGCACGCGCGACGGCAAGCGCGACGTGCGCATCGCGGTCGATCCGGGGAAGCAGACGA
TCGTGTCGAGCGTCGACCTGACGTTCAAGGGGCCCATCGACACCGAGGATCCGAAGCAGGAAGCCGCGACCCGTTTCGCG
TTTTCGCTGAAGCCGGGCGACCCGTTCACGCAGTCCGACTGGGACGGCGCGAAGGGCGCGGCGCTCAAGCAACTGCAGTC
GCGCCGCTATCTCGGCGGGAAGATCGCGTCGTCGGAAGCGCGCATCGACCCGCGCACGCAGCGCGCGACGCTCGCGGTCA
CGTTCGACAGCGGCCCGACGTTCACGATCGGCAAGGTCGACGTCGACGGTGTGCGGCGCTATCCGGAAAAGATCGTCACG
AACGTCAATCCGCTGTCGGAAGGCGAGATCTACGACGTGCAGCGCATCACCGAACTGCAGCGGCAGTTGCAGAACACGCC
CTATTACGCGAGCGTCGCGATCGACGTCGGCGACGATACGGCGAAGCCCGAGCGCACGCCCGTGCACGTGAAGGTCAGCG
AGTTCCCGTACAACAACATCCGCGGCGGTGTCGGTTTTGCCACCGACACCGGGCCGCACGTGCAGGGTTCCTATACGTAT
CTCGACACGTTCGGCGCCGCGTGGCCGCTGACCGTGTCGGGCCGGCTCGACCAGATCCAGCAATACGGGCAGGTCCAGCT
GTCGATGCCGCCGGGCGCGAAGGGCTGGACCAACAGCGTGCTCGCGTCGTACACGAACACCAACGTGTCGGACACGCGCA
TCTACAGCGCGCGGGTCGGCGTGCAGCGCACGCGCACCGGCCAGTTCATCGACTATTCGTATTCGCTGATGTACTACCAG
GACCGGCTCGACCAGAACGGCGCGGGTCCGACCACGAGCCGCGCGCTCGTGCCGCAATGGGCGTGGACGCGCCGCAACGT
CGACGATCCGCTGTTCCCGCGTTCGGGCAACCTGATCCACGCGGAGGCCGGCTTTGCGATCAAGGGCGTGGCGACCGACC
AGTCGTTCATCCGCGGCTACGCGCGCGGCCAGCAGTACCTGCCGATCGGCAAGCGCGACCTGTTCGTGTTCCGCGCGGAG
CTCGGCGGCGTGTTCACGAGCGGCAGCTCGACCGGCGTGCCGGCGTCGCTGCTGTTCCGCGCGGGCGGCTCGAACTCGGT
GCGCGGCTACGGCTACCAGAGCATCGGCAACAGCGTCGACGGCTCCGTGCTGCCGACCAAGTACCTGATGACGGGCACTG
CCGAATACCAGCACTGGTTCAACCGCGACTGGGGCGCCGCGACGTTCTTCGACATCGGCACCGCCACCGATGCGTGGGGC
GAGCGCGTGTTCTACCCGGGTGTCGGCATCGGCGCGCGCTGGCGCAGCCCCGTCGGCCCGATCAACGTCGACGTCGCGTA
CGGGTTGCGCAACCATAGCGTGCGCCCGTACCTGACGCTCGGCATCGCTTTCTGA

Upstream 100 bases:

>100_bases
TGCGCGCAGCGGTTTACAAACATTAAGCTTTGGTGCCAGCCCCCTGTGGTCAAATACAGGGTTTTCCACAAAACCGTGAT
AACCGAGGGCGAGGTCATAT

Downstream 100 bases:

>100_bases
CCGTACCGCTTCACCGACGACGAACCGCATGACGAAGGACCCGAACGACACGCCGCCGCCTCACGATCCGGACTCGCCCG
ACGGCGCGCCCGACGCGCCG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 603

Protein sequence:

>604_residues
MAGQSNQQAHTAHDAGPRVERNRAGAAARAARVTLAGCLAACFALPAHAKYNVDIDAPRSVRKLLKSHLDIARFAKRDDI
SDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGKRDVRIAVDPGKQTIVSSVDLTFKGPIDTEDPKQEAATRFA
FSLKPGDPFTQSDWDGAKGAALKQLQSRRYLGGKIASSEARIDPRTQRATLAVTFDSGPTFTIGKVDVDGVRRYPEKIVT
NVNPLSEGEIYDVQRITELQRQLQNTPYYASVAIDVGDDTAKPERTPVHVKVSEFPYNNIRGGVGFATDTGPHVQGSYTY
LDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGAKGWTNSVLASYTNTNVSDTRIYSARVGVQRTRTGQFIDYSYSLMYYQ
DRLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAIKGVATDQSFIRGYARGQQYLPIGKRDLFVFRAE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWG
ERVFYPGVGIGARWRSPVGPINVDVAYGLRNHSVRPYLTLGIAF

Sequences:

>Translated_604_residues
MAGQSNQQAHTAHDAGPRVERNRAGAAARAARVTLAGCLAACFALPAHAKYNVDIDAPRSVRKLLKSHLDIARFAKRDDI
SDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGKRDVRIAVDPGKQTIVSSVDLTFKGPIDTEDPKQEAATRFA
FSLKPGDPFTQSDWDGAKGAALKQLQSRRYLGGKIASSEARIDPRTQRATLAVTFDSGPTFTIGKVDVDGVRRYPEKIVT
NVNPLSEGEIYDVQRITELQRQLQNTPYYASVAIDVGDDTAKPERTPVHVKVSEFPYNNIRGGVGFATDTGPHVQGSYTY
LDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGAKGWTNSVLASYTNTNVSDTRIYSARVGVQRTRTGQFIDYSYSLMYYQ
DRLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAIKGVATDQSFIRGYARGQQYLPIGKRDLFVFRAE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWG
ERVFYPGVGIGARWRSPVGPINVDVAYGLRNHSVRPYLTLGIAF
>Mature_603_residues
AGQSNQQAHTAHDAGPRVERNRAGAAARAARVTLAGCLAACFALPAHAKYNVDIDAPRSVRKLLKSHLDIARFAKRDDIS
DDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGKRDVRIAVDPGKQTIVSSVDLTFKGPIDTEDPKQEAATRFAF
SLKPGDPFTQSDWDGAKGAALKQLQSRRYLGGKIASSEARIDPRTQRATLAVTFDSGPTFTIGKVDVDGVRRYPEKIVTN
VNPLSEGEIYDVQRITELQRQLQNTPYYASVAIDVGDDTAKPERTPVHVKVSEFPYNNIRGGVGFATDTGPHVQGSYTYL
DTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGAKGWTNSVLASYTNTNVSDTRIYSARVGVQRTRTGQFIDYSYSLMYYQD
RLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAIKGVATDQSFIRGYARGQQYLPIGKRDLFVFRAEL
GGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWGE
RVFYPGVGIGARWRSPVGPINVDVAYGLRNHSVRPYLTLGIAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=528, Percent_Identity=26.7045454545455, Blast_Score=142, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 66118; Mature: 65986

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQSNQQAHTAHDAGPRVERNRAGAAARAARVTLAGCLAACFALPAHAKYNVDIDAPRS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
VRKLLKSHLDIARFAKRDDISDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RDVRIAVDPGKQTIVSSVDLTFKGPIDTEDPKQEAATRFAFSLKPGDPFTQSDWDGAKGA
CEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCHH
ALKQLQSRRYLGGKIASSEARIDPRTQRATLAVTFDSGPTFTIGKVDVDGVRRYPEKIVT
HHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHC
NVNPLSEGEIYDVQRITELQRQLQNTPYYASVAIDVGDDTAKPERTPVHVKVSEFPYNNI
CCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCC
RGGVGFATDTGPHVQGSYTYLDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGAKGWTNSV
CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCHHHHHHCCCEEEECCCCCCCCCHHH
LASYTNTNVSDTRIYSARVGVQRTRTGQFIDYSYSLMYYQDRLDQNGAGPTTSRALVPQW
HHEECCCCCCCEEEEEEECCCEECCCCCEEEEEEEEEEEEHHCCCCCCCCCCCCEECCCC
AWTRRNVDDPLFPRSGNLIHAEAGFAIKGVATDQSFIRGYARGQQYLPIGKRDLFVFRAE
HHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHCCCEECCCCCCEEEEEEEE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWF
CCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHEEECCHHHHHHH
NRDWGAATFFDIGTATDAWGERVFYPGVGIGARWRSPVGPINVDVAYGLRNHSVRPYLTL
CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
GIAF
EEEC
>Mature Secondary Structure 
AGQSNQQAHTAHDAGPRVERNRAGAAARAARVTLAGCLAACFALPAHAKYNVDIDAPRS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
VRKLLKSHLDIARFAKRDDISDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RDVRIAVDPGKQTIVSSVDLTFKGPIDTEDPKQEAATRFAFSLKPGDPFTQSDWDGAKGA
CEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCHH
ALKQLQSRRYLGGKIASSEARIDPRTQRATLAVTFDSGPTFTIGKVDVDGVRRYPEKIVT
HHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHC
NVNPLSEGEIYDVQRITELQRQLQNTPYYASVAIDVGDDTAKPERTPVHVKVSEFPYNNI
CCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCC
RGGVGFATDTGPHVQGSYTYLDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGAKGWTNSV
CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCHHHHHHCCCEEEECCCCCCCCCHHH
LASYTNTNVSDTRIYSARVGVQRTRTGQFIDYSYSLMYYQDRLDQNGAGPTTSRALVPQW
HHEECCCCCCCEEEEEEECCCEECCCCCEEEEEEEEEEEEHHCCCCCCCCCCCCEECCCC
AWTRRNVDDPLFPRSGNLIHAEAGFAIKGVATDQSFIRGYARGQQYLPIGKRDLFVFRAE
HHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHCCCEECCCCCCEEEEEEEE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWF
CCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHEEECCHHHHHHH
NRDWGAATFFDIGTATDAWGERVFYPGVGIGARWRSPVGPINVDVAYGLRNHSVRPYLTL
CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
GIAF
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]