| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yhhW [C]
Identifier: 78067199
GI number: 78067199
Start: 2835602
End: 2836297
Strand: Reverse
Name: yhhW [C]
Synonym: Bcep18194_A5730
Alternate gene names: 78067199
Gene position: 2836297-2835602 (Counterclockwise)
Preceding gene: 78067204
Following gene: 78067197
Centisome position: 76.78
GC content: 73.13
Gene sequence:
>696_bases ATGTTCCAGATCCGCCGCGCCGCCGATCGCGACCAGCGCAGCCAAGGCTGGCACGAATTCCTTCACAGCTTTCCTTGCGC GTCCGGCCGGAGCGGGCCGCCGGTGTTCGGCGCGTTGCGCGAACTGAACGAGGAATGCATCGCACCGACCCGCGGCTACG GGATGCGGCCGTACCGCGACGCGGAAATCGTCACCTATGTGCTCGACGGCGCGCTCGCGCATCGCGACAGCCTCGGCAAC GGGGCGATTGTCCGTGCGGGCGGCCTGCAGCGCATGAGTGCCGGCACCGGCGTCATGCTGAGCGAAACCAACGCGTCGTG TGACGAGCCGCTGCGCCTGCTGCGGATCTGGCTCGCGCCGGCCGGGGCGGCTGGCCGGCCCGGCTACGTGCAGGCGCGCT TTGCCGACGACGAGAAACGCGGGCGGCTGCGGCTGGTGGCGGCCCCGGACGGTGGCGACGGCGCGCTGCAGATGGGGGCG GACGCACGCATCTTCGCGGGGCTGATCGACGGCGATGAAGCGGCGGCGTTCGACGTGCCGGCCGGGCGCCGCGCGTACGT GCACGTGGTGCGCGGTGACGTCGAGGTGAACGGCCGCGCGCTGACTGCGGGCGACGGCGCGCGGATCAGCGGCGTGGACG CGGTGGCGTTCGGGCGCGGCCGGGCGGCCGAGGTGCTGCTGTTCGACGTCGCCTGA
Upstream 100 bases:
>100_bases GTGCAACGATGCGGTGCGCAGGCGGCGGATTGTGGCGCGATTGGCACACTCATACAGTGACGGGATGCCCGAACCACGCA TCTCACGGAGTGTCCGTCCC
Downstream 100 bases:
>100_bases AACGCAAAAAGGGGACGCGGGCCGGTGCCCGCGTCCCCTTCGATGCCGCTCCCGGGAGCGGCCCGCCGGCTTACTGCGCC GGTGCCGACGCGGCCTTCGC
Product: Pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MFQIRRAADRDQRSQGWHEFLHSFPCASGRSGPPVFGALRELNEECIAPTRGYGMRPYRDAEIVTYVLDGALAHRDSLGN GAIVRAGGLQRMSAGTGVMLSETNASCDEPLRLLRIWLAPAGAAGRPGYVQARFADDEKRGRLRLVAAPDGGDGALQMGA DARIFAGLIDGDEAAAFDVPAGRRAYVHVVRGDVEVNGRALTAGDGARISGVDAVAFGRGRAAEVLLFDVA
Sequences:
>Translated_231_residues MFQIRRAADRDQRSQGWHEFLHSFPCASGRSGPPVFGALRELNEECIAPTRGYGMRPYRDAEIVTYVLDGALAHRDSLGN GAIVRAGGLQRMSAGTGVMLSETNASCDEPLRLLRIWLAPAGAAGRPGYVQARFADDEKRGRLRLVAAPDGGDGALQMGA DARIFAGLIDGDEAAAFDVPAGRRAYVHVVRGDVEVNGRALTAGDGARISGVDAVAFGRGRAAEVLLFDVA >Mature_231_residues MFQIRRAADRDQRSQGWHEFLHSFPCASGRSGPPVFGALRELNEECIAPTRGYGMRPYRDAEIVTYVLDGALAHRDSLGN GAIVRAGGLQRMSAGTGVMLSETNASCDEPLRLLRIWLAPAGAAGRPGYVQARFADDEKRGRLRLVAAPDGGDGALQMGA DARIFAGLIDGDEAAAFDVPAGRRAYVHVVRGDVEVNGRALTAGDGARISGVDAVAFGRGRAAEVLLFDVA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=37.6623376623377, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI1789493, Length=238, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 24507; Mature: 24507
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQIRRAADRDQRSQGWHEFLHSFPCASGRSGPPVFGALRELNEECIAPTRGYGMRPYRD CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC AEIVTYVLDGALAHRDSLGNGAIVRAGGLQRMSAGTGVMLSETNASCDEPLRLLRIWLAP HHHEEEEHHHHHHHHCCCCCCEEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHCC AGAAGRPGYVQARFADDEKRGRLRLVAAPDGGDGALQMGADARIFAGLIDGDEAAAFDVP CCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEECCCCCEEEECC AGRRAYVHVVRGDVEVNGRALTAGDGARISGVDAVAFGRGRAAEVLLFDVA CCCEEEEEEEECCEEECCEEEECCCCCEECCCEEEEECCCCEEEEEEEECC >Mature Secondary Structure MFQIRRAADRDQRSQGWHEFLHSFPCASGRSGPPVFGALRELNEECIAPTRGYGMRPYRD CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC AEIVTYVLDGALAHRDSLGNGAIVRAGGLQRMSAGTGVMLSETNASCDEPLRLLRIWLAP HHHEEEEHHHHHHHHCCCCCCEEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHCC AGAAGRPGYVQARFADDEKRGRLRLVAAPDGGDGALQMGADARIFAGLIDGDEAAAFDVP CCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEECCCCCEEEECC AGRRAYVHVVRGDVEVNGRALTAGDGARISGVDAVAFGRGRAAEVLLFDVA CCCEEEEEEEECCEEECCEEEECCCCCEECCCEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]