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The map label for this gene is uup-A [H]

Identifier: 78067169

GI number: 78067169

Start: 2809737

End: 2811686

Strand: Reverse

Name: uup-A [H]

Synonym: Bcep18194_A5700

Alternate gene names: 78067169

Gene position: 2811686-2809737 (Counterclockwise)

Preceding gene: 78067170

Following gene: 78067168

Centisome position: 76.11

GC content: 66.21

Gene sequence:

>1950_bases
ATGTCGCTCTATTCCATTTCCGGCGCGCAGCTCGCGTTCGGTCACGTCGCGTTGCTCGATCACGCGGATTTCTCGCTGGA
AGCCGGCGAGCGCGTCGGCCTGATCGGCCGCAACGGCGCGGGCAAGTCGTCGCTGCTGAAGATCGTCGCCGGGCTCGCGA
AGCCCGACGACGGGCTGGTCACGCGCCAGCAGGAACTCGTGACCGTCTATGTGCCGCAGGAGCCCGAATTCGAGCCGGGC
GCGACGGTGTTCGATGCCGTGGCATCGGGGCTCGCGCACACGCGCGAACTGCTCGAAGAATATGATTCGATCGCGCACCG
CCTCGCGGATATCCCCGAAGGCGCCGAGCACGATGCACTGCTCGCACGGATGAACGTGCTGCAGTCGTCGCTCGACGCGC
ACGACGCATGGAGCTGGCGCACACGCGTGTCGATGACGCTCGCGCAGATCGGCCTGGCGGACGTCGATGCACCCGTCGAT
GCGTTGTCGGGCGGGATGCAGAAGCGCGTCGCGCTGGCACGCGCGCTGGTGCTGCAGCCCGACGTGCTGCTGCTCGACGA
ACCGACCAACCACCTCGACTTCGACGGCATCCGCTGGCTGGAAGAGCTGCTCGTCGCGCAGCGCGCGGGCCTGCTGTTCA
TCACGCACGATCGCGCGTTCCTCGACCGCGTCGCGACGCGCATCGTCGACCTCGATCGCGGCCGGCTGCTGTCGTACCCG
GGCAATTTCTCCGCATACCAGACGCGCAAGGAGCAGCAGCTCGAAATCGAGCGCGTGGAAAACGAGAAGTTCGACAAGCT
GCTCGCGCAGGAAGAAGTGTGGATCCGCAAGGGCGTCGAAGCGCGCCGTACACGCAGTGTCGGCCGCATCGCGCGGCTCG
TGCAGATGCGCAACGATCGCGCGGAGCGCCGCAACACGCTGGGCAACGTGAAGCTGGATGTCGCGCAGGGCGAGAAGTCC
GGCAAGATCGTCGCAGAGCTGACCGACGTGACGAAGCGCTACGGCGGCCGGGCGGTCGTCGATCGTTTCTCGACGACGGT
GATGCGCGGCGACAAGATCGGCTTCATCGGCCCGAACGGCGCCGGCAAGACGACGCTGCTCAAGCTGATTCTCGGCGAAC
TGAAGCCCGACGAAGGCACGGTGCGCATCGGCACCAACCTGCAGGTCGCGTATTTCGACCAGATGCGTGCGCAGCTCGAC
CAGGAAAAGAGCCTCGCGGATACGATCAGCCCCGGCAGCGAATGGGTCGAGATCGGCGGCGTGCGCAAGCACGTGATGAG
CTATCTCGGCGATTTCCTGTTCGCGCCGGAACGCGCGCGTTCGCCGGTGAAGTCGCTGTCGGGCGGCGAACGCAACCGGT
TGCTGCTCGCGCGCCTGTTCGCGCGTCCGGCCAACGTGCTGGTGCTCGACGAACCGACCAACGACCTCGACATCCAGACG
CTCGAGCTGCTCGAGGAACTGCTGGCCGACTACGACGGCACGGTGCTGCTCGTCAGCCACGATCGCGCGTTCCTCGACAA
CGTCGTGACGTCGGTGATCGCGGCCGAGGGCGACGGCAAGTGGCGCGAATACGTGGGCGGCTTCAGCGACTGGCAGATCC
AGAGCGCGCGCGCGGATCAGCTCGCACAGCAGGAAGCCGCGAAGCGCGCGGTCAAGGAAGCCGCACCCGTCAAGGAAGAA
CCGGCGAAAAGTGCCGCGGGCCGCAACACGCAACGCACGGTGAAGCTGTCGTTCAACGAGCAGCGCGAGCTCGATTCGCT
GCCGGAGAAGATCGCCGCGCTCGAAGAGGAGCAGAAGACGATCAACGCCAGGCTCGAAGACGGTTCGATTTTCGCGAAGG
ATCCGCAGGAAGGCACACGCCTGACCGAGCGGTTCGCGGCGATCGACGACGAATTGCTCGCCGCGCTCGAACGGTGGGAA
ACGCTCGAGGCGAAGCGCAAGCCTGCGTAA

Upstream 100 bases:

>100_bases
TCCCAACCCGTTTGCCTGCCTTATCCATCCGGCCATACCGGTGACGCCGCCCGCGACCGGTACAATGGGCGCTTCCGATT
TCTCTCTTCGCCGTCTCCCC

Downstream 100 bases:

>100_bases
AACGCATGACACGTCGCGCGGCCGGCGGCCGCCGCGCGCGATTCCGCGATTGGCGTGCCACGCGGAACCAGTAAAATACC
GCGCGTCCCGGGCAGCGCAG

Product: ABC transporter, fused ATPase subunits

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MSLYSISGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPG
ATVFDAVASGLAHTRELLEEYDSIAHRLADIPEGAEHDALLARMNVLQSSLDAHDAWSWRTRVSMTLAQIGLADVDAPVD
ALSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLEELLVAQRAGLLFITHDRAFLDRVATRIVDLDRGRLLSYP
GNFSAYQTRKEQQLEIERVENEKFDKLLAQEEVWIRKGVEARRTRSVGRIARLVQMRNDRAERRNTLGNVKLDVAQGEKS
GKIVAELTDVTKRYGGRAVVDRFSTTVMRGDKIGFIGPNGAGKTTLLKLILGELKPDEGTVRIGTNLQVAYFDQMRAQLD
QEKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIQT
LELLEELLADYDGTVLLVSHDRAFLDNVVTSVIAAEGDGKWREYVGGFSDWQIQSARADQLAQQEAAKRAVKEAAPVKEE
PAKSAAGRNTQRTVKLSFNEQRELDSLPEKIAALEEEQKTINARLEDGSIFAKDPQEGTRLTERFAAIDDELLAALERWE
TLEAKRKPA

Sequences:

>Translated_649_residues
MSLYSISGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPG
ATVFDAVASGLAHTRELLEEYDSIAHRLADIPEGAEHDALLARMNVLQSSLDAHDAWSWRTRVSMTLAQIGLADVDAPVD
ALSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLEELLVAQRAGLLFITHDRAFLDRVATRIVDLDRGRLLSYP
GNFSAYQTRKEQQLEIERVENEKFDKLLAQEEVWIRKGVEARRTRSVGRIARLVQMRNDRAERRNTLGNVKLDVAQGEKS
GKIVAELTDVTKRYGGRAVVDRFSTTVMRGDKIGFIGPNGAGKTTLLKLILGELKPDEGTVRIGTNLQVAYFDQMRAQLD
QEKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIQT
LELLEELLADYDGTVLLVSHDRAFLDNVVTSVIAAEGDGKWREYVGGFSDWQIQSARADQLAQQEAAKRAVKEAAPVKEE
PAKSAAGRNTQRTVKLSFNEQRELDSLPEKIAALEEEQKTINARLEDGSIFAKDPQEGTRLTERFAAIDDELLAALERWE
TLEAKRKPA
>Mature_648_residues
SLYSISGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPGA
TVFDAVASGLAHTRELLEEYDSIAHRLADIPEGAEHDALLARMNVLQSSLDAHDAWSWRTRVSMTLAQIGLADVDAPVDA
LSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLEELLVAQRAGLLFITHDRAFLDRVATRIVDLDRGRLLSYPG
NFSAYQTRKEQQLEIERVENEKFDKLLAQEEVWIRKGVEARRTRSVGRIARLVQMRNDRAERRNTLGNVKLDVAQGEKSG
KIVAELTDVTKRYGGRAVVDRFSTTVMRGDKIGFIGPNGAGKTTLLKLILGELKPDEGTVRIGTNLQVAYFDQMRAQLDQ
EKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIQTL
ELLEELLADYDGTVLLVSHDRAFLDNVVTSVIAAEGDGKWREYVGGFSDWQIQSARADQLAQQEAAKRAVKEAAPVKEEP
AKSAAGRNTQRTVKLSFNEQRELDSLPEKIAALEEEQKTINARLEDGSIFAKDPQEGTRLTERFAAIDDELLAALERWET
LEAKRKPA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=543, Percent_Identity=32.9650092081031, Blast_Score=217, Evalue=3e-56,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=31.0280373831776, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=31.214953271028, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI69354671, Length=530, Percent_Identity=30, Blast_Score=179, Evalue=8e-45,
Organism=Homo sapiens, GI10947135, Length=530, Percent_Identity=30, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI150417984, Length=241, Percent_Identity=29.8755186721992, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1787182, Length=645, Percent_Identity=47.4418604651163, Blast_Score=546, Evalue=1e-156,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=36.6602687140115, Blast_Score=349, Evalue=3e-97,
Organism=Escherichia coli, GI1787041, Length=532, Percent_Identity=32.1428571428571, Blast_Score=263, Evalue=4e-71,
Organism=Escherichia coli, GI1789751, Length=616, Percent_Identity=30.8441558441558, Blast_Score=258, Evalue=6e-70,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=33.5106382978723, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1789891, Length=255, Percent_Identity=29.4117647058824, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=32.4074074074074, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788761, Length=245, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1788225, Length=258, Percent_Identity=27.5193798449612, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789864, Length=251, Percent_Identity=27.8884462151394, Blast_Score=76, Evalue=8e-15,
Organism=Escherichia coli, GI1790544, Length=269, Percent_Identity=29.368029739777, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=27.0042194092827, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1788506, Length=238, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081791, Length=208, Percent_Identity=27.4038461538462, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=27.5109170305677, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1788897, Length=229, Percent_Identity=27.9475982532751, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=190, Percent_Identity=27.3684210526316, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786345, Length=213, Percent_Identity=31.4553990610329, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788644, Length=134, Percent_Identity=32.8358208955224, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI48995001, Length=198, Percent_Identity=29.2929292929293, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1790190, Length=251, Percent_Identity=25.0996015936255, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787164, Length=186, Percent_Identity=29.0322580645161, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1787712, Length=200, Percent_Identity=28.5, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=29.7951582867784, Blast_Score=216, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17553372, Length=551, Percent_Identity=31.3974591651543, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17555318, Length=530, Percent_Identity=28.6792452830189, Blast_Score=177, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=29.3785310734463, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6321121, Length=551, Percent_Identity=29.7640653357532, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6325030, Length=393, Percent_Identity=29.0076335877863, Blast_Score=143, Evalue=9e-35,
Organism=Saccharomyces cerevisiae, GI6324314, Length=405, Percent_Identity=27.4074074074074, Blast_Score=131, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=402, Percent_Identity=26.6169154228856, Blast_Score=127, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24666836, Length=543, Percent_Identity=32.0441988950276, Blast_Score=218, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24641342, Length=535, Percent_Identity=29.9065420560748, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24642252, Length=554, Percent_Identity=29.9638989169675, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI18859989, Length=554, Percent_Identity=29.9638989169675, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=31.8918918918919, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=31.8918918918919, Blast_Score=77, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71833; Mature: 71702

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYSISGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAKPDDGLV
CCEEECCCCHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
TRQQELVTVYVPQEPEFEPGATVFDAVASGLAHTRELLEEYDSIAHRLADIPEGAEHDAL
ECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LARMNVLQSSLDAHDAWSWRTRVSMTLAQIGLADVDAPVDALSGGMQKRVALARALVLQP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCC
DVLLLDEPTNHLDFDGIRWLEELLVAQRAGLLFITHDRAFLDRVATRIVDLDRGRLLSYP
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCEECCC
GNFSAYQTRKEQQLEIERVENEKFDKLLAQEEVWIRKGVEARRTRSVGRIARLVQMRNDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AERRNTLGNVKLDVAQGEKSGKIVAELTDVTKRYGGRAVVDRFSTTVMRGDKIGFIGPNG
HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCC
AGKTTLLKLILGELKPDEGTVRIGTNLQVAYFDQMRAQLDQEKSLADTISPGSEWVEIGG
CCHHHHHHHHHHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VRKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIQT
HHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHH
LELLEELLADYDGTVLLVSHDRAFLDNVVTSVIAAEGDGKWREYVGGFSDWQIQSARADQ
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECHHHHHH
LAQQEAAKRAVKEAAPVKEEPAKSAAGRNTQRTVKLSFNEQRELDSLPEKIAALEEEQKT
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
INARLEDGSIFAKDPQEGTRLTERFAAIDDELLAALERWETLEAKRKPA
HHCEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLYSISGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAKPDDGLV
CEEECCCCHHHHHHEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
TRQQELVTVYVPQEPEFEPGATVFDAVASGLAHTRELLEEYDSIAHRLADIPEGAEHDAL
ECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LARMNVLQSSLDAHDAWSWRTRVSMTLAQIGLADVDAPVDALSGGMQKRVALARALVLQP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCC
DVLLLDEPTNHLDFDGIRWLEELLVAQRAGLLFITHDRAFLDRVATRIVDLDRGRLLSYP
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCEECCC
GNFSAYQTRKEQQLEIERVENEKFDKLLAQEEVWIRKGVEARRTRSVGRIARLVQMRNDR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AERRNTLGNVKLDVAQGEKSGKIVAELTDVTKRYGGRAVVDRFSTTVMRGDKIGFIGPNG
HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCC
AGKTTLLKLILGELKPDEGTVRIGTNLQVAYFDQMRAQLDQEKSLADTISPGSEWVEIGG
CCHHHHHHHHHHHCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VRKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIQT
HHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHH
LELLEELLADYDGTVLLVSHDRAFLDNVVTSVIAAEGDGKWREYVGGFSDWQIQSARADQ
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECHHHHHH
LAQQEAAKRAVKEAAPVKEEPAKSAAGRNTQRTVKLSFNEQRELDSLPEKIAALEEEQKT
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
INARLEDGSIFAKDPQEGTRLTERFAAIDDELLAALERWETLEAKRKPA
HHCEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]