| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78067123
Identifier: 78067123
GI number: 78067123
Start: 2752911
End: 2754056
Strand: Reverse
Name: 78067123
Synonym: Bcep18194_A5654
Alternate gene names: NA
Gene position: 2754056-2752911 (Counterclockwise)
Preceding gene: 78067124
Following gene: 78067122
Centisome position: 74.55
GC content: 68.94
Gene sequence:
>1146_bases ATGCCGTGGAATGGCCCGTCGCGACGACAAAGAACTGACAGCCTCCACATGACCATGGCCAATGTGAACCCGACGCAGCG GATCCTCGTGATCCGGATCGATTTTCTGGGCGACATGCTGTGCACGACGGCGTTTCTCCGCGCGCTGAAGGAGCGCTGGC CCGGCGCCGAACTCCATGTGGTCGCGAACCGCTACAACGCGGCCGCGCTGGCCGGAAACCCGGACGTCGACACGATCCAC ACCTACGTCTATAGCCGTCAATGCGAGCGTAACGACCGCCCCGGACGGATGCGCGCATTCTTCGACCGGCTGCGGCTCGT GCGTCGCCTGCGTCGCTTGCGGTTCGACCTCGTGGTCGTGCCGAACGGCGGCATGCATCGCAGCAGCATGCAGTTCGCGC GTCAGATCGGCGCGAAGGATTGCCGCTGGCACGATGCCGAGACCGAATTCGACGATCGCAAGCCCGATCACGTCGCGCAG CGGCCGATGTGTCACGAAGCGCTGTCGGGTTTCCGGCTCGTACCCGAACTCGGCCGCGCCGATCTCGACCGCCTCGCGTT GTCGGTTCATCCCGACCGCGCGCTGCAGGACGCGTGGTATCGGCTGCTCGGCGCACGCACGAAGCCGCGGGTCGGGCTGT TCGTGACGAACAAGGCGGCCGAGCGCCGCTGGCCGGCGGATCGCTGGCGCGACCTCGCCGAGCGGCTTGCGCCGTACGCC GATGTGATCGTGTTCCGCGACCCGGCAGTCGGCCATGCGCCCGAGGACGATTCGTGGCGCGACGTGTGCGCGCGCCATGT CGCGCCGTCGTCGGTCGCCGAGCTGGTGGCCGCGACGAGCCTGCTCGATGCGATCGTCTCGGCCGACAGCGCCCCCGTGC ATCTTGCGTCGGCGCTCGGCGTGCCTGTCGCCGCGCTGTTCGAGGACCGTCCCGAGAAATACCTGCGCTGGCATCCGCTC GGTGTGCCGCACGTGATCCTGCGCGCCGGCGCGACCGTCGACGCGATCGGCGTCGACGAAGTCGAGCGGGCGGTGAATCA CCTGCTGCCGCAGGCCATCCGTCGCGACGAACCGTTGGCCGATGCGGGATACGCGCGGCCGGCTGCCGCCGCTGCGGCGC CGGCGGTCATGACTGTCGCTTCGTAG
Upstream 100 bases:
>100_bases ACCGCCGCTCGTCCGGCAGGTGGCGCCAGTATCGCGCACATATACGGGGGCGGATCCGTGCGGCGAGCGGTGACATGCGA CCAGGCCGCCCCGGAAGCGG
Downstream 100 bases:
>100_bases CGCCACAGGCATTGCAAGCACCGCGTACGGCACCCGCACCGGCGCGCGGTGCGCCGGCCTCGCCGCACCCCGCGAGCGGG GCCGCATCAGGCCAGCCGCA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Sugar Transferase; ADP-Heptose; Heptosyl Transferase
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPWNGPSRRQRTDSLHMTMANVNPTQRILVIRIDFLGDMLCTTAFLRALKERWPGAELHVVANRYNAAALAGNPDVDTIH TYVYSRQCERNDRPGRMRAFFDRLRLVRRLRRLRFDLVVVPNGGMHRSSMQFARQIGAKDCRWHDAETEFDDRKPDHVAQ RPMCHEALSGFRLVPELGRADLDRLALSVHPDRALQDAWYRLLGARTKPRVGLFVTNKAAERRWPADRWRDLAERLAPYA DVIVFRDPAVGHAPEDDSWRDVCARHVAPSSVAELVAATSLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLRWHPL GVPHVILRAGATVDAIGVDEVERAVNHLLPQAIRRDEPLADAGYARPAAAAAAPAVMTVAS
Sequences:
>Translated_381_residues MPWNGPSRRQRTDSLHMTMANVNPTQRILVIRIDFLGDMLCTTAFLRALKERWPGAELHVVANRYNAAALAGNPDVDTIH TYVYSRQCERNDRPGRMRAFFDRLRLVRRLRRLRFDLVVVPNGGMHRSSMQFARQIGAKDCRWHDAETEFDDRKPDHVAQ RPMCHEALSGFRLVPELGRADLDRLALSVHPDRALQDAWYRLLGARTKPRVGLFVTNKAAERRWPADRWRDLAERLAPYA DVIVFRDPAVGHAPEDDSWRDVCARHVAPSSVAELVAATSLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLRWHPL GVPHVILRAGATVDAIGVDEVERAVNHLLPQAIRRDEPLADAGYARPAAAAAAPAVMTVAS >Mature_380_residues PWNGPSRRQRTDSLHMTMANVNPTQRILVIRIDFLGDMLCTTAFLRALKERWPGAELHVVANRYNAAALAGNPDVDTIHT YVYSRQCERNDRPGRMRAFFDRLRLVRRLRRLRFDLVVVPNGGMHRSSMQFARQIGAKDCRWHDAETEFDDRKPDHVAQR PMCHEALSGFRLVPELGRADLDRLALSVHPDRALQDAWYRLLGARTKPRVGLFVTNKAAERRWPADRWRDLAERLAPYAD VIVFRDPAVGHAPEDDSWRDVCARHVAPSSVAELVAATSLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLRWHPLG VPHVILRAGATVDAIGVDEVERAVNHLLPQAIRRDEPLADAGYARPAAAAAAPAVMTVAS
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42637; Mature: 42506
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWNGPSRRQRTDSLHMTMANVNPTQRILVIRIDFLGDMLCTTAFLRALKERWPGAELHV CCCCCCCHHHHCCHHEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEE VANRYNAAALAGNPDVDTIHTYVYSRQCERNDRPGRMRAFFDRLRLVRRLRRLRFDLVVV EECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE PNGGMHRSSMQFARQIGAKDCRWHDAETEFDDRKPDHVAQRPMCHEALSGFRLVPELGRA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCHHHHHCHH DLDRLALSVHPDRALQDAWYRLLGARTKPRVGLFVTNKAAERRWPADRWRDLAERLAPYA HHHHHHEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHCCHH DVIVFRDPAVGHAPEDDSWRDVCARHVAPSSVAELVAATSLLDAIVSADSAPVHLASALG CEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC VPVAALFEDRPEKYLRWHPLGVPHVILRAGATVDAIGVDEVERAVNHLLPQAIRRDEPLA CHHHHHHHCCCHHHHEECCCCCHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCC DAGYARPAAAAAAPAVMTVAS CCCCCCCHHHHHCCCHHEECC >Mature Secondary Structure PWNGPSRRQRTDSLHMTMANVNPTQRILVIRIDFLGDMLCTTAFLRALKERWPGAELHV CCCCCCHHHHCCHHEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEE VANRYNAAALAGNPDVDTIHTYVYSRQCERNDRPGRMRAFFDRLRLVRRLRRLRFDLVVV EECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE PNGGMHRSSMQFARQIGAKDCRWHDAETEFDDRKPDHVAQRPMCHEALSGFRLVPELGRA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCHHHHHCHH DLDRLALSVHPDRALQDAWYRLLGARTKPRVGLFVTNKAAERRWPADRWRDLAERLAPYA HHHHHHEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHCCHH DVIVFRDPAVGHAPEDDSWRDVCARHVAPSSVAELVAATSLLDAIVSADSAPVHLASALG CEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC VPVAALFEDRPEKYLRWHPLGVPHVILRAGATVDAIGVDEVERAVNHLLPQAIRRDEPLA CHHHHHHHCCCHHHHEECCCCCHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCC DAGYARPAAAAAAPAVMTVAS CCCCCCCHHHHHCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA