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The map label for this gene is intZ [H]

Identifier: 78067111

GI number: 78067111

Start: 2739065

End: 2740276

Strand: Reverse

Name: intZ [H]

Synonym: Bcep18194_A5642

Alternate gene names: 78067111

Gene position: 2740276-2739065 (Counterclockwise)

Preceding gene: 78067117

Following gene: 78067110

Centisome position: 74.18

GC content: 59.74

Gene sequence:

>1212_bases
GTGGGGAAGCGGCTAACGAACGTGTTGAACGATATCCAGCTGCGGCAGCTTGTGCGCGCTGGTGTGCCGGCAGCGAAGGC
TGACGGGAACGGACTTACCTTCACGTTGTCTGCAACCGGAACGGCCTCGTGGATTCTGCGGTTCTACCATCGCGGTCGAC
GGCAAGAGCTGACGCTCGGTCGATATCCTGATATCACGTTGTCCGCGGCGCGGGCAATGGCGGCACGGAAGCGGGCTCAG
CTGGCCGATGGAATCAACCCGGCGGAAGAGCAGCGAAAATTGAGGAGCCGGCGCGACTGGTCGATGCGCGAGCTGATAGC
CGATTACCGCGTAAAGGTTCTAAGCACGCTCGCGACCAGCACGCAACGCAGCTACGGCCGAAATTTGAAGCGCGTCGAGA
ACGGCATGGGTGCGATGTCGGTGCAGTCTGTAGGGCCCGCAGACATTGTGGCCGAGATCGAGCGTCACGACCTGGGATGG
GTCGAAATCTTCACGCTCTGGTGTGTACTACGCGGCCTGTTCAAGCATGCGGCCGGCAAGAAGATCATCGTCGCCAATCC
CTGCGCCGGAATCCAGCTCGACGCGATCATCGGGAAGCGCCCGCCGGTGAAACCCCGATTAATGCTGACCGACGACGAGC
TCTACGTCCTGCTGAACGCAAAAATGCGCGACGTGAATCTCTACGCTGTCCGTATCGCGCTTGCGACTGGTGTTCGAATT
TCCGAGCTGTACACCGCACTTCGTCGTGATCTTCACCTTAGTGAAGGTCGTTGGCATGTCCCGAAAAGCAAGACGGGGCC
GGAAATGGATATTCCGCTTGTGCCGATTGTAATTGAGTGGTTCGAGCGGTTGCTCGCGCTGGCCGGGACGTCCGAATACG
TCCTGCCGGCCCGCCTGAGCAATCGCCTGGATCGTCACCACGGGGACACGCACGTATCGAAGGATGCGATTCGGGAAGCG
ATCGACTACTGGATCGAGCACCACGAACCTGCGATTCGCCGCTTCACGCCGCACGATCTTCGAAGCACGATGAAGAGTCA
TATGCGGCGGCTGAAGGTGCCGCGCGACATTTCGGAAATGTGCTTGAACCACAAAATTCCGGGCGTGGAAGGGATCTACG
ATCAGTACACGTATTGGGACGAACGCCGTCACGCGCTCGGCACTTGGGCGGCACATCTTGAGCGATGCGCTCGCGGCTGC
CCGGATGTTTAA

Upstream 100 bases:

>100_bases
TTCCCCCTTCATTTCAAGGCAAAATCGCCTCAACGTGTATCGACGCGTCTCGACGAATCCAGATTAAAATAGGTAGCTGT
AAAGGTAGCTGGAGCGAAAA

Downstream 100 bases:

>100_bases
TTAATAGGGTTCGATCGCTCGGAAGATACGCACAATCCTGCGCGGGCTCCCCTCGATTATTGAGGCGCGGCGAGATTCGC
CGAGACGCCATAAACGATGG

Product: Phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MGKRLTNVLNDIQLRQLVRAGVPAAKADGNGLTFTLSATGTASWILRFYHRGRRQELTLGRYPDITLSAARAMAARKRAQ
LADGINPAEEQRKLRSRRDWSMRELIADYRVKVLSTLATSTQRSYGRNLKRVENGMGAMSVQSVGPADIVAEIERHDLGW
VEIFTLWCVLRGLFKHAAGKKIIVANPCAGIQLDAIIGKRPPVKPRLMLTDDELYVLLNAKMRDVNLYAVRIALATGVRI
SELYTALRRDLHLSEGRWHVPKSKTGPEMDIPLVPIVIEWFERLLALAGTSEYVLPARLSNRLDRHHGDTHVSKDAIREA
IDYWIEHHEPAIRRFTPHDLRSTMKSHMRRLKVPRDISEMCLNHKIPGVEGIYDQYTYWDERRHALGTWAAHLERCARGC
PDV

Sequences:

>Translated_403_residues
MGKRLTNVLNDIQLRQLVRAGVPAAKADGNGLTFTLSATGTASWILRFYHRGRRQELTLGRYPDITLSAARAMAARKRAQ
LADGINPAEEQRKLRSRRDWSMRELIADYRVKVLSTLATSTQRSYGRNLKRVENGMGAMSVQSVGPADIVAEIERHDLGW
VEIFTLWCVLRGLFKHAAGKKIIVANPCAGIQLDAIIGKRPPVKPRLMLTDDELYVLLNAKMRDVNLYAVRIALATGVRI
SELYTALRRDLHLSEGRWHVPKSKTGPEMDIPLVPIVIEWFERLLALAGTSEYVLPARLSNRLDRHHGDTHVSKDAIREA
IDYWIEHHEPAIRRFTPHDLRSTMKSHMRRLKVPRDISEMCLNHKIPGVEGIYDQYTYWDERRHALGTWAAHLERCARGC
PDV
>Mature_402_residues
GKRLTNVLNDIQLRQLVRAGVPAAKADGNGLTFTLSATGTASWILRFYHRGRRQELTLGRYPDITLSAARAMAARKRAQL
ADGINPAEEQRKLRSRRDWSMRELIADYRVKVLSTLATSTQRSYGRNLKRVENGMGAMSVQSVGPADIVAEIERHDLGWV
EIFTLWCVLRGLFKHAAGKKIIVANPCAGIQLDAIIGKRPPVKPRLMLTDDELYVLLNAKMRDVNLYAVRIALATGVRIS
ELYTALRRDLHLSEGRWHVPKSKTGPEMDIPLVPIVIEWFERLLALAGTSEYVLPARLSNRLDRHHGDTHVSKDAIREAI
DYWIEHHEPAIRRFTPHDLRSTMKSHMRRLKVPRDISEMCLNHKIPGVEGIYDQYTYWDERRHALGTWAAHLERCARGCP
DV

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=379, Percent_Identity=22.9551451187335, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788690, Length=376, Percent_Identity=24.7340425531915, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788974, Length=421, Percent_Identity=22.0902612826603, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45851; Mature: 45720

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRLTNVLNDIQLRQLVRAGVPAAKADGNGLTFTLSATGTASWILRFYHRGRRQELTLG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC
RYPDITLSAARAMAARKRAQLADGINPAEEQRKLRSRRDWSMRELIADYRVKVLSTLATS
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TQRSYGRNLKRVENGMGAMSVQSVGPADIVAEIERHDLGWVEIFTLWCVLRGLFKHAAGK
HHHHHCCHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
KIIVANPCAGIQLDAIIGKRPPVKPRLMLTDDELYVLLNAKMRDVNLYAVRIALATGVRI
EEEEECCCCCCEEHHHHCCCCCCCCEEEEECCCEEEEEECCEECCCCEEEEEHHHHCCHH
SELYTALRRDLHLSEGRWHVPKSKTGPEMDIPLVPIVIEWFERLLALAGTSEYVLPARLS
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHH
NRLDRHHGDTHVSKDAIREAIDYWIEHHEPAIRRFTPHDLRSTMKSHMRRLKVPRDISEM
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
CLNHKIPGVEGIYDQYTYWDERRHALGTWAAHLERCARGCPDV
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GKRLTNVLNDIQLRQLVRAGVPAAKADGNGLTFTLSATGTASWILRFYHRGRRQELTLG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC
RYPDITLSAARAMAARKRAQLADGINPAEEQRKLRSRRDWSMRELIADYRVKVLSTLATS
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TQRSYGRNLKRVENGMGAMSVQSVGPADIVAEIERHDLGWVEIFTLWCVLRGLFKHAAGK
HHHHHCCHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
KIIVANPCAGIQLDAIIGKRPPVKPRLMLTDDELYVLLNAKMRDVNLYAVRIALATGVRI
EEEEECCCCCCEEHHHHCCCCCCCCEEEEECCCEEEEEECCEECCCCEEEEEHHHHCCHH
SELYTALRRDLHLSEGRWHVPKSKTGPEMDIPLVPIVIEWFERLLALAGTSEYVLPARLS
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHH
NRLDRHHGDTHVSKDAIREAIDYWIEHHEPAIRRFTPHDLRSTMKSHMRRLKVPRDISEM
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH
CLNHKIPGVEGIYDQYTYWDERRHALGTWAAHLERCARGCPDV
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]