| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067102
Identifier: 78067102
GI number: 78067102
Start: 2730107
End: 2732707
Strand: Reverse
Name: 78067102
Synonym: Bcep18194_A5633
Alternate gene names: NA
Gene position: 2732707-2730107 (Counterclockwise)
Preceding gene: 78067103
Following gene: 78067100
Centisome position: 73.97
GC content: 58.59
Gene sequence:
>2601_bases ATGACCGTCACGTCTTCCGCTCAGGATATCTCATACGCCACAGACGGGGCGACGACAGATTTCCAGATTCCGTTTTATTT TCTTGATAACGCGCATATCGTCGTCGACAAAATCGATGCGAACGGCGGGTTGACGCGTCTCACGTACGGCACCGATTTTA CGGTGGGCGGCGCGGGGGCTGTGAACGGTGGCACACTGACGGCGCTGTCGGTATTTGCGCGCGGCTTCACCCTGCATATC TATCGTGACGTCCCGGCCACGCAGGAAACCGAATACCAACAGAACGACCCGTTTCCTGCGAAAACTACGGAAAAGGCGCT CGATAAGCTGACGATGATTGCGCAGCAGAACGCCGCAGCCACGCAGAATTCCATCCGGTTCCCGATCAGCGAATACGGTC GAGACGGAACCCTGCCATCCGCGCCGCAGCGCGCTATGAACGTCCTCGGCTTCGACGTCGCCGGCAACGTAACAATGCTG CCCGTGCCGGCTTCCGTTGGTGCTGGCGATCTACGGGACGATATTCTCGTTGCCGGCGTCGATTTCATTGCAGGTGTCGA TTCGTCTGTCACGCTCTCGCGCGCGTATGGCACAAAGGCCAATCTTACCGTCAGCATGGACGCCGCTCTACAGGGCGCAG ACACGTTCCGTTTGAACGGGGCGACGCTCACGTTTCTCGATGACAACGGCAACCCCGCCGCGATTCCATTCGGGATTCAG AAAATCTACGTGAAGGGCGGCACGACGCTCTCGATTTACACACCGCCCGATGAATCGGTGACAGACGCGAAGATCGCGCC GGGCTCCAAACTCGACAACCGTATCACCGGGACTATCGATGTCAGGGACTTTGGCGCCGTAGGGGACGGCGTTGCGAATG ACACTGCAGCGATCCAAGCGGCGATCGATTTTGCGCAATCGCGATTCAAGACCGACTACTGGTCGACGTACGTTCCGAGC GTTCGCATCCCGGCTGGAACCTACCTCGTACGCGGCTTGACGATCTCGTACCCCATCCACCTGCACGGTGACGGCCAGAA CGCAACGACGCTGAATCTGATGAGCGACTCAAATGCCAGCGTCGTCGCTGTTACCGATATGGGCGGCAGCTTGGCCGGCG CGGACAACAACAACATCATGCCGATCATTTCGGATATGTCGTTGAACTGCAACAGCAGCGGCCAAACGCCAGGCGGCTAC TTCCGCGGCGTTTCCCTGACTGACTCCGCCATTCCGGTCGGCACGAACTATCACGGCGGCGCTGAACTGCGGAATTTGAA CATCCGGGCCGCAATGGAATACGGTGTCTTTATCGGATCGAATCGAAACAACGGCCGGATGGCCAATGTCAGGGTTCTGT ACTCCGGATCCGACTGCGTGTACAACAGCGCCTACGACTGGCGCATCGTTGATTGCGATTTCGGAAACTCGCAGAACTCG AACGGCTACGTGCAACACGCCGGCGGGGCAACCGAAATGATCAATTGCAACATCTTCGTCAACAAGCTGTCGGGGCTATT TCTCGATACCGGTGTCAATGCGTCGTGCCTATTCGCGAACTGCTACTTCGATACGAATCAGCGGCACGGTACCGTCGGCA TCGGCTCCTACGGCGATGTTGTGTCGCACGCCTTCAGTAACTGCGTCTGGCGCGACAATTCGCAAGAGGCCGACAACACT TACGATCAGATCAATCTCTCGAATATGACGCAGGTCACGATCGAAGGGGGAACCTTCGTCGTGAATATCCCCGCCAAGCA GCCGCGCTATTTGATCAATACGGCGAACGTAACGCGCGTGGTATTCAATGCGACGTATGAGCAGAATGACACGCCGAACG TGCCCTATAGAACCGCGGTTGCGAACGACTACCTGAACCTCGCGATCGGCGGAAACGAGAACTGTTCGCTCGCGACCATG GGCGGTTCGACAGTGGGGGTAGTGGGTCGGAACGGAGTGCGTTTCGACTACTACGATCCGGCTTCGGTAAGCGGCACACG CCGGTGGCGCACGCAGGCCTTGGGGTCGGTCTACTCGCTTTATGCGGCCGATGATTCCGGAAATCTGGCCGCCGGGTCGC TGGCGTTCCAGGTCACTCGCACCGGATCGTCCCCGAGCGCTTTGCAGACCGTATCGGTTCAACCGTACACGGACAATGCT TTTCCGTGCGGCGCTGCCGGGTTTCGCTGGTCGGTCGTTTACGCGGCTACAGGCGTGATCAACACATCGGACGAGAATCA AAAGGAACAGATCGAAGGGATTCCGGACGCGTGGCTCGATGCGTGGGCCGATGTCGACTACTTCGCGTTCAAGTTCAAAG ATGCTACGGCTGAGAAAGGAGCCGATAACGCGCGCTGGCACGTCGGGTTCGTCGCGCAGCGGGTTCGTGATGCCTTCGCG AAGCATGGGATCGACGCAGCCAAAATCGGGTTGCTGTGCTGGGATTCGTGGCCGGCACAGTCTGCGGTTCTGGATGACGA AGGGAATGTCATCAAGCCGGCCATTGACGCCGGGGAGGCATGGGGTATCCGCTACGAGGAAGCGCTGGCGATGGAAGCGG CGTTGATGCGACGGGAGCTGAAGAAGTTGCGAGCGTCGTAG
Upstream 100 bases:
>100_bases GTGCGAAAAGACGGGCAAGCGCCGCGAAGACGCGCCGCGCCGGCCGCTGTTGCTGCGCTCGAACCCTCTGGCGCGGGTGT TTAATAGATAAGGATTACAT
Downstream 100 bases:
>100_bases CGAGGCGACCGGCCGCTTGCGCGGCCTGGCTTGCTGTACGGCGCGATGCTCAGTTGTCGAACCCAATGGACTTCCGATAT CGATTGAGCGCTTTGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 866; Mature: 865
Protein sequence:
>866_residues MTVTSSAQDISYATDGATTDFQIPFYFLDNAHIVVDKIDANGGLTRLTYGTDFTVGGAGAVNGGTLTALSVFARGFTLHI YRDVPATQETEYQQNDPFPAKTTEKALDKLTMIAQQNAAATQNSIRFPISEYGRDGTLPSAPQRAMNVLGFDVAGNVTML PVPASVGAGDLRDDILVAGVDFIAGVDSSVTLSRAYGTKANLTVSMDAALQGADTFRLNGATLTFLDDNGNPAAIPFGIQ KIYVKGGTTLSIYTPPDESVTDAKIAPGSKLDNRITGTIDVRDFGAVGDGVANDTAAIQAAIDFAQSRFKTDYWSTYVPS VRIPAGTYLVRGLTISYPIHLHGDGQNATTLNLMSDSNASVVAVTDMGGSLAGADNNNIMPIISDMSLNCNSSGQTPGGY FRGVSLTDSAIPVGTNYHGGAELRNLNIRAAMEYGVFIGSNRNNGRMANVRVLYSGSDCVYNSAYDWRIVDCDFGNSQNS NGYVQHAGGATEMINCNIFVNKLSGLFLDTGVNASCLFANCYFDTNQRHGTVGIGSYGDVVSHAFSNCVWRDNSQEADNT YDQINLSNMTQVTIEGGTFVVNIPAKQPRYLINTANVTRVVFNATYEQNDTPNVPYRTAVANDYLNLAIGGNENCSLATM GGSTVGVVGRNGVRFDYYDPASVSGTRRWRTQALGSVYSLYAADDSGNLAAGSLAFQVTRTGSSPSALQTVSVQPYTDNA FPCGAAGFRWSVVYAATGVINTSDENQKEQIEGIPDAWLDAWADVDYFAFKFKDATAEKGADNARWHVGFVAQRVRDAFA KHGIDAAKIGLLCWDSWPAQSAVLDDEGNVIKPAIDAGEAWGIRYEEALAMEAALMRRELKKLRAS
Sequences:
>Translated_866_residues MTVTSSAQDISYATDGATTDFQIPFYFLDNAHIVVDKIDANGGLTRLTYGTDFTVGGAGAVNGGTLTALSVFARGFTLHI YRDVPATQETEYQQNDPFPAKTTEKALDKLTMIAQQNAAATQNSIRFPISEYGRDGTLPSAPQRAMNVLGFDVAGNVTML PVPASVGAGDLRDDILVAGVDFIAGVDSSVTLSRAYGTKANLTVSMDAALQGADTFRLNGATLTFLDDNGNPAAIPFGIQ KIYVKGGTTLSIYTPPDESVTDAKIAPGSKLDNRITGTIDVRDFGAVGDGVANDTAAIQAAIDFAQSRFKTDYWSTYVPS VRIPAGTYLVRGLTISYPIHLHGDGQNATTLNLMSDSNASVVAVTDMGGSLAGADNNNIMPIISDMSLNCNSSGQTPGGY FRGVSLTDSAIPVGTNYHGGAELRNLNIRAAMEYGVFIGSNRNNGRMANVRVLYSGSDCVYNSAYDWRIVDCDFGNSQNS NGYVQHAGGATEMINCNIFVNKLSGLFLDTGVNASCLFANCYFDTNQRHGTVGIGSYGDVVSHAFSNCVWRDNSQEADNT YDQINLSNMTQVTIEGGTFVVNIPAKQPRYLINTANVTRVVFNATYEQNDTPNVPYRTAVANDYLNLAIGGNENCSLATM GGSTVGVVGRNGVRFDYYDPASVSGTRRWRTQALGSVYSLYAADDSGNLAAGSLAFQVTRTGSSPSALQTVSVQPYTDNA FPCGAAGFRWSVVYAATGVINTSDENQKEQIEGIPDAWLDAWADVDYFAFKFKDATAEKGADNARWHVGFVAQRVRDAFA KHGIDAAKIGLLCWDSWPAQSAVLDDEGNVIKPAIDAGEAWGIRYEEALAMEAALMRRELKKLRAS >Mature_865_residues TVTSSAQDISYATDGATTDFQIPFYFLDNAHIVVDKIDANGGLTRLTYGTDFTVGGAGAVNGGTLTALSVFARGFTLHIY RDVPATQETEYQQNDPFPAKTTEKALDKLTMIAQQNAAATQNSIRFPISEYGRDGTLPSAPQRAMNVLGFDVAGNVTMLP VPASVGAGDLRDDILVAGVDFIAGVDSSVTLSRAYGTKANLTVSMDAALQGADTFRLNGATLTFLDDNGNPAAIPFGIQK IYVKGGTTLSIYTPPDESVTDAKIAPGSKLDNRITGTIDVRDFGAVGDGVANDTAAIQAAIDFAQSRFKTDYWSTYVPSV RIPAGTYLVRGLTISYPIHLHGDGQNATTLNLMSDSNASVVAVTDMGGSLAGADNNNIMPIISDMSLNCNSSGQTPGGYF RGVSLTDSAIPVGTNYHGGAELRNLNIRAAMEYGVFIGSNRNNGRMANVRVLYSGSDCVYNSAYDWRIVDCDFGNSQNSN GYVQHAGGATEMINCNIFVNKLSGLFLDTGVNASCLFANCYFDTNQRHGTVGIGSYGDVVSHAFSNCVWRDNSQEADNTY DQINLSNMTQVTIEGGTFVVNIPAKQPRYLINTANVTRVVFNATYEQNDTPNVPYRTAVANDYLNLAIGGNENCSLATMG GSTVGVVGRNGVRFDYYDPASVSGTRRWRTQALGSVYSLYAADDSGNLAAGSLAFQVTRTGSSPSALQTVSVQPYTDNAF PCGAAGFRWSVVYAATGVINTSDENQKEQIEGIPDAWLDAWADVDYFAFKFKDATAEKGADNARWHVGFVAQRVRDAFAK HGIDAAKIGLLCWDSWPAQSAVLDDEGNVIKPAIDAGEAWGIRYEEALAMEAALMRRELKKLRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92519; Mature: 92388
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTSSAQDISYATDGATTDFQIPFYFLDNAHIVVDKIDANGGLTRLTYGTDFTVGGAGA CCCCCCCCCCEEECCCCCCEEEEEEEEECCCEEEEEEEECCCCEEEEEECCCEEECCCCC VNGGTLTALSVFARGFTLHIYRDVPATQETEYQQNDPFPAKTTEKALDKLTMIAQQNAAA CCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC TQNSIRFPISEYGRDGTLPSAPQRAMNVLGFDVAGNVTMLPVPASVGAGDLRDDILVAGV CCCCEECCHHHCCCCCCCCCCHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCEEEECC DFIAGVDSSVTLSRAYGTKANLTVSMDAALQGADTFRLNGATLTFLDDNGNPAAIPFGIQ HHHHCCCCCEEEEECCCCCCEEEEEECCEECCCCEEEECCEEEEEEECCCCEEEEEECEE KIYVKGGTTLSIYTPPDESVTDAKIAPGSKLDNRITGTIDVRDFGAVGDGVANDTAAIQA EEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH AIDFAQSRFKTDYWSTYVPSVRIPAGTYLVRGLTISYPIHLHGDGQNATTLNLMSDSNAS HHHHHHHHHCCCCHHHCCCEEECCCCEEEEEEEEEEEEEEEEECCCCCEEEEEEECCCCC VVAVTDMGGSLAGADNNNIMPIISDMSLNCNSSGQTPGGYFRGVSLTDSAIPVGTNYHGG EEEEEECCCEEECCCCCCEEEEEECCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC AELRNLNIRAAMEYGVFIGSNRNNGRMANVRVLYSGSDCVYNSAYDWRIVDCDFGNSQNS CEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCEEECCCCCEEEEEECCCCCCCC NGYVQHAGGATEMINCNIFVNKLSGLFLDTGVNASCLFANCYFDTNQRHGTVGIGSYGDV CCEEEECCCCEEEEEEEEEEECCCCEEEECCCCCEEEEEEEEEECCCCCCEEEECCHHHH VSHAFSNCVWRDNSQEADNTYDQINLSNMTQVTIEGGTFVVNIPAKQPRYLINTANVTRV HHHHHHCCEECCCCCCCCCCHHEEECCCEEEEEEECCEEEEECCCCCCEEEEECCCEEEE VFNATYEQNDTPNVPYRTAVANDYLNLAIGGNENCSLATMGGSTVGVVGRNGVRFDYYDP EEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCEEEEECCCCEEEECCCC ASVSGTRRWRTQALGSVYSLYAADDSGNLAAGSLAFQVTRTGSSPSALQTVSVQPYTDNA CCCCCCHHHHHHHHCCEEEEEEECCCCCEEECEEEEEEEECCCCCCCEEEEEECCCCCCC FPCGAAGFRWSVVYAATGVINTSDENQKEQIEGIPDAWLDAWADVDYFAFKFKDATAEKG CCCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCHHHHHHHCCCCEEEEEEECCHHCCC ADNARWHVGFVAQRVRDAFAKHGIDAAKIGLLCWDSWPAQSAVLDDEGNVIKPAIDAGEA CCCCEEEHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEECCCCCEEECCCCCCCC WGIRYEEALAMEAALMRRELKKLRAS CCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVTSSAQDISYATDGATTDFQIPFYFLDNAHIVVDKIDANGGLTRLTYGTDFTVGGAGA CCCCCCCCCEEECCCCCCEEEEEEEEECCCEEEEEEEECCCCEEEEEECCCEEECCCCC VNGGTLTALSVFARGFTLHIYRDVPATQETEYQQNDPFPAKTTEKALDKLTMIAQQNAAA CCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC TQNSIRFPISEYGRDGTLPSAPQRAMNVLGFDVAGNVTMLPVPASVGAGDLRDDILVAGV CCCCEECCHHHCCCCCCCCCCHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCEEEECC DFIAGVDSSVTLSRAYGTKANLTVSMDAALQGADTFRLNGATLTFLDDNGNPAAIPFGIQ HHHHCCCCCEEEEECCCCCCEEEEEECCEECCCCEEEECCEEEEEEECCCCEEEEEECEE KIYVKGGTTLSIYTPPDESVTDAKIAPGSKLDNRITGTIDVRDFGAVGDGVANDTAAIQA EEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH AIDFAQSRFKTDYWSTYVPSVRIPAGTYLVRGLTISYPIHLHGDGQNATTLNLMSDSNAS HHHHHHHHHCCCCHHHCCCEEECCCCEEEEEEEEEEEEEEEEECCCCCEEEEEEECCCCC VVAVTDMGGSLAGADNNNIMPIISDMSLNCNSSGQTPGGYFRGVSLTDSAIPVGTNYHGG EEEEEECCCEEECCCCCCEEEEEECCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC AELRNLNIRAAMEYGVFIGSNRNNGRMANVRVLYSGSDCVYNSAYDWRIVDCDFGNSQNS CEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCEEECCCCCEEEEEECCCCCCCC NGYVQHAGGATEMINCNIFVNKLSGLFLDTGVNASCLFANCYFDTNQRHGTVGIGSYGDV CCEEEECCCCEEEEEEEEEEECCCCEEEECCCCCEEEEEEEEEECCCCCCEEEECCHHHH VSHAFSNCVWRDNSQEADNTYDQINLSNMTQVTIEGGTFVVNIPAKQPRYLINTANVTRV HHHHHHCCEECCCCCCCCCCHHEEECCCEEEEEEECCEEEEECCCCCCEEEEECCCEEEE VFNATYEQNDTPNVPYRTAVANDYLNLAIGGNENCSLATMGGSTVGVVGRNGVRFDYYDP EEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCEEEEECCCCEEEECCCC ASVSGTRRWRTQALGSVYSLYAADDSGNLAAGSLAFQVTRTGSSPSALQTVSVQPYTDNA CCCCCCHHHHHHHHCCEEEEEEECCCCCEEECEEEEEEEECCCCCCCEEEEEECCCCCCC FPCGAAGFRWSVVYAATGVINTSDENQKEQIEGIPDAWLDAWADVDYFAFKFKDATAEKG CCCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCHHHHHHHCCCCEEEEEEECCHHCCC ADNARWHVGFVAQRVRDAFAKHGIDAAKIGLLCWDSWPAQSAVLDDEGNVIKPAIDAGEA CCCCEEEHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEECCCCCEEECCCCCCCC WGIRYEEALAMEAALMRRELKKLRAS CCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA