| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is kdpB [H]
Identifier: 78067083
GI number: 78067083
Start: 2712949
End: 2715033
Strand: Reverse
Name: kdpB [H]
Synonym: Bcep18194_A5614
Alternate gene names: 78067083
Gene position: 2715033-2712949 (Counterclockwise)
Preceding gene: 78067084
Following gene: 78067082
Centisome position: 73.5
GC content: 67.24
Gene sequence:
>2085_bases ATGACTCAACATTCCGCAACACGGTCCATGTTCGATCCGGCGCTGCTGCGCCCGGCGATCGTGGACTCGTTCAAGAAACT CACGCCGCGCACGCAGTTCCGCAATCCGGTGATGTTCTGCGTGTACGTCGGCAGCATCCTGACCACGATCCTGTGGATCG CGGCGCTCGCCGGCCAGGCCGAGGCGCCCGCGGGCTTCATCCTCGCGATCGCGCTGTGGCTGTGGTTCACCGTCCTGTTC GCGAACTTCGCCGAAGCGCTCGCCGAAGGGCGCTCGAAGGCGCAGGCGGCCTCGCTGCGCAGCGCGAAGAAAGACGTGAT GGCGAAGAAGCTCAACGAGCCGCATCCGAAGTCGCCGATCCGCATCACGACCGCGACCGAGCTGCGCAAGGGCGACGTCG TGCTGGTCGAGGCCGGCGACGTGATCCCGGCCGACGGCGAGGTGGTCGACGGTGTCGCATCCGTCGACGAATCGGCAATC ACCGGCGAATCCGCGCCGGTGATCCGCGAATCGGGCGGCGACTTCTCGTCGGTCACGGGCGGCACGCGCGTGCTGTCGGA CTGGATCGTCGTCAAGGTCACCGCGAACCCGGGCGAGGCGTTCCTCGACCGGATGATCGCGATGGTCGAAGGCGCGAAGC GCAAGAAGACGCCGAACGAGATCGCGCTGACGATCCTGCTCGTCGCGCTGACGATCGTGATGCTGCTCGCGACCGCGACG CTGCTGCCGTTCTCGATGTTCTCGGTGGAAGCGATGAAGGCCGGCCACGTGGTGACGATCACCGCTTTGGTTGCGCTGCT CGTGTGCCTGATCCCGACGACGATCGGCGGTCTCTTGTCCGCAATCGGCGTGGCCGGGATGAGCCGGATGATGCAGGCGA ACGTGATCGCGACGTCGGGCCGCGCAGTGGAAGCGGCCGGCGACGTCGACGTGCTGCTGCTCGACAAGACCGGCACGATC ACGCTCGGTAACCGCCAGGCATCGACGTTCGTGCCCGCGCCGGGCGTGACCGAGGAAGCGCTGGCCGATGCCGCGCAACT GTCGTCGCTCGCCGACGAAACGCCGGAAGGCCGCAGCATCGTCGTGCTCGCGAAGGAGCGCTTCAACATTCGCCAGCGCG ACATGGGGCAACTGCACGCGACGTTCATCGGCTTCTCCGCGCAGACGCGGATGAGCGGCGTCGACCTGCCCGGCCGCGAG ATCCGCAAGGGCGCGGCCGACGCGATCCGCAACTACGTCGAATCGCACGGCAGCCGCTTCCCGGAAGAGGTGCGCCGCGC GGTCGATGAAGTCGCGCGCCGCGGCAGCACGCCGCTCGTCGTGGCCGACCTGCATGAAGGCGCGGCGCGCGTACTCGGCG TGATCGAGCTGAAGGACATCGTGAAGGGCGGCATCAAGGAGCGCTTCGCGGAGCTGCGCAAGATGGGCATCAAGACCGTG ATGGTGACGGGCGACAACCGGCTGACGGCTGCGGCGATCGCGGCGGAAGCGGGCGTCGACGATTTCCTCGCGGAAGCGAC GCCGGAAACCAAGCTCGCGACGATCCGCGAACACCAGGCAGCAGGCCGCCTCGTCGCGATGACCGGCGACGGCACCAACG ACGCACCGGCACTCGCGCAGGCCGACGTCGCCGTGGCGATGAACACCGGCACGCAGGCGGCGAAGGAAGCCGGCAACATG GTCGACCTCGACTCGAACCCGACGAAGCTGATCGAGATCGTCGAGATCGGCAAGCAGATGCTGATGACGCGCGGTTCGCT GACGACGTTCTCGATCGCGAACGACATCGCGAAGTATTTCGCGATCATCCCGGCCGCGTTCGTCACGACGTACCCGCAGC TGCGCGTGCTCGACATCATGCACCTGACGTCGCCGGCGTCCGCGATCCTGTCGGCGGTGATCTTCAACGCGCTGATCATC GTCGCGCTGATTCCGCTGGCACTGAAGGGCGTCACGTACCGGCCGCTCGGCGCCGCTTCGCTCCTGCGCCGCAACCTGCT GGTGTACGGCCTCGGCGGCGTGCTGCTGCCGTTCCCGTTCATCAAGCTGATCGACATGACGCTCGCTGCACTCGGCTGGG CGTGA
Upstream 100 bases:
>100_bases GCTCGGCCCGGGCGTCGAGCACCTGATGATGTGGCTGGGCGCGTGATGCGCGCCCGCATGGCGACACCTTGAAAAGACTC AAGAGATTGAAGAGATCGCA
Downstream 100 bases:
>100_bases GCCGGCCGTATTTGAAGGAAACATCATGAAAACGTTGATTCGTCCGCTCGTCGTGATCTTTGTCGTGCTGACCGCGGTGA CGGGGCTCGCTTACCCGGCC
Product: potassium-transporting ATPase subunit B
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] B chain; Potassium-binding and translocating subunit B; Potassium-translocating ATPase B chain [H]
Number of amino acids: Translated: 694; Mature: 693
Protein sequence:
>694_residues MTQHSATRSMFDPALLRPAIVDSFKKLTPRTQFRNPVMFCVYVGSILTTILWIAALAGQAEAPAGFILAIALWLWFTVLF ANFAEALAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPIRITTATELRKGDVVLVEAGDVIPADGEVVDGVASVDESAI TGESAPVIRESGGDFSSVTGGTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKKTPNEIALTILLVALTIVMLLATAT LLPFSMFSVEAMKAGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTI TLGNRQASTFVPAPGVTEEALADAAQLSSLADETPEGRSIVVLAKERFNIRQRDMGQLHATFIGFSAQTRMSGVDLPGRE IRKGAADAIRNYVESHGSRFPEEVRRAVDEVARRGSTPLVVADLHEGAARVLGVIELKDIVKGGIKERFAELRKMGIKTV MVTGDNRLTAAAIAAEAGVDDFLAEATPETKLATIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNM VDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFVTTYPQLRVLDIMHLTSPASAILSAVIFNALII VALIPLALKGVTYRPLGAASLLRRNLLVYGLGGVLLPFPFIKLIDMTLAALGWA
Sequences:
>Translated_694_residues MTQHSATRSMFDPALLRPAIVDSFKKLTPRTQFRNPVMFCVYVGSILTTILWIAALAGQAEAPAGFILAIALWLWFTVLF ANFAEALAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPIRITTATELRKGDVVLVEAGDVIPADGEVVDGVASVDESAI TGESAPVIRESGGDFSSVTGGTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKKTPNEIALTILLVALTIVMLLATAT LLPFSMFSVEAMKAGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTI TLGNRQASTFVPAPGVTEEALADAAQLSSLADETPEGRSIVVLAKERFNIRQRDMGQLHATFIGFSAQTRMSGVDLPGRE IRKGAADAIRNYVESHGSRFPEEVRRAVDEVARRGSTPLVVADLHEGAARVLGVIELKDIVKGGIKERFAELRKMGIKTV MVTGDNRLTAAAIAAEAGVDDFLAEATPETKLATIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNM VDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFVTTYPQLRVLDIMHLTSPASAILSAVIFNALII VALIPLALKGVTYRPLGAASLLRRNLLVYGLGGVLLPFPFIKLIDMTLAALGWA >Mature_693_residues TQHSATRSMFDPALLRPAIVDSFKKLTPRTQFRNPVMFCVYVGSILTTILWIAALAGQAEAPAGFILAIALWLWFTVLFA NFAEALAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPIRITTATELRKGDVVLVEAGDVIPADGEVVDGVASVDESAIT GESAPVIRESGGDFSSVTGGTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKKTPNEIALTILLVALTIVMLLATATL LPFSMFSVEAMKAGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTIT LGNRQASTFVPAPGVTEEALADAAQLSSLADETPEGRSIVVLAKERFNIRQRDMGQLHATFIGFSAQTRMSGVDLPGREI RKGAADAIRNYVESHGSRFPEEVRRAVDEVARRGSTPLVVADLHEGAARVLGVIELKDIVKGGIKERFAELRKMGIKTVM VTGDNRLTAAAIAAEAGVDDFLAEATPETKLATIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMV DLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFVTTYPQLRVLDIMHLTSPASAILSAVIFNALIIV ALIPLALKGVTYRPLGAASLLRRNLLVYGLGGVLLPFPFIKLIDMTLAALGWA
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2216
COG function: function code P; High-affinity K+ transport system, ATPase chain B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=626, Percent_Identity=24.4408945686901, Blast_Score=145, Evalue=2e-34, Organism=Homo sapiens, GI55743073, Length=471, Percent_Identity=27.3885350318471, Blast_Score=142, Evalue=2e-33, Organism=Homo sapiens, GI48762687, Length=599, Percent_Identity=25.0417362270451, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI48762689, Length=599, Percent_Identity=25.0417362270451, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI48762691, Length=599, Percent_Identity=25.0417362270451, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI48762685, Length=599, Percent_Identity=25.0417362270451, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI118498343, Length=583, Percent_Identity=25.9005145797599, Blast_Score=107, Evalue=5e-23, Organism=Homo sapiens, GI115529486, Length=152, Percent_Identity=37.5, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI28373109, Length=190, Percent_Identity=26.8421052631579, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI28373115, Length=190, Percent_Identity=26.8421052631579, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI28373111, Length=190, Percent_Identity=26.8421052631579, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI28373103, Length=190, Percent_Identity=26.8421052631579, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI28373113, Length=190, Percent_Identity=26.8421052631579, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI28373105, Length=190, Percent_Identity=26.8421052631579, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI28373107, Length=190, Percent_Identity=26.8421052631579, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI51944966, Length=200, Percent_Identity=27, Blast_Score=74, Evalue=6e-13, Organism=Homo sapiens, GI297374799, Length=201, Percent_Identity=27.363184079602, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI83700225, Length=201, Percent_Identity=27.363184079602, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1786914, Length=684, Percent_Identity=73.5380116959064, Blast_Score=968, Evalue=0.0, Organism=Escherichia coli, GI1789879, Length=456, Percent_Identity=28.5087719298246, Blast_Score=137, Evalue=3e-33, Organism=Escherichia coli, GI1786691, Length=432, Percent_Identity=28.7037037037037, Blast_Score=129, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17556548, Length=471, Percent_Identity=27.1762208067941, Blast_Score=122, Evalue=9e-28, Organism=Caenorhabditis elegans, GI71997262, Length=576, Percent_Identity=25.8680555555556, Blast_Score=115, Evalue=8e-26, Organism=Caenorhabditis elegans, GI71997275, Length=575, Percent_Identity=25.9130434782609, Blast_Score=115, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71997269, Length=574, Percent_Identity=25.9581881533101, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI193210130, Length=295, Percent_Identity=24.0677966101695, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17554158, Length=295, Percent_Identity=24.0677966101695, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71988506, Length=295, Percent_Identity=24.0677966101695, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17557770, Length=157, Percent_Identity=31.8471337579618, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI32566766, Length=157, Percent_Identity=31.8471337579618, Blast_Score=74, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17557486, Length=154, Percent_Identity=32.4675324675325, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17531459, Length=124, Percent_Identity=30.6451612903226, Blast_Score=66, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321430, Length=523, Percent_Identity=26.0038240917782, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6325221, Length=523, Percent_Identity=25.8126195028681, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6320475, Length=475, Percent_Identity=25.4736842105263, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321271, Length=607, Percent_Identity=24.5469522240527, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319772, Length=473, Percent_Identity=23.4672304439746, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI221329854, Length=152, Percent_Identity=38.1578947368421, Blast_Score=100, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006391 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 73506; Mature: 73374
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS00018 EF_HAND_1 ; PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHSATRSMFDPALLRPAIVDSFKKLTPRTQFRNPVMFCVYVGSILTTILWIAALAGQA CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC EAPAGFILAIALWLWFTVLFANFAEALAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE RITTATELRKGDVVLVEAGDVIPADGEVVDGVASVDESAITGESAPVIRESGGDFSSVTG EEEEHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCHHCCCCCCCCEECCCCCCCCCCC GTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKKTPNEIALTILLVALTIVMLLATAT CHHEECCEEEEEEECCCHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LLPFSMFSVEAMKAGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC RAVEAAGDVDVLLLDKTGTITLGNRQASTFVPAPGVTEEALADAAQLSSLADETPEGRSI CEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEE VVLAKERFNIRQRDMGQLHATFIGFSAQTRMSGVDLPGREIRKGAADAIRNYVESHGSRF EEEEHHHCCCCHHHHHHHHHHHEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC PEEVRRAVDEVARRGSTPLVVADLHEGAARVLGVIELKDIVKGGIKERFAELRKMGIKTV HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEE MVTGDNRLTAAAIAAEAGVDDFLAEATPETKLATIREHQAAGRLVAMTGDGTNDAPALAQ EEECCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH ADVAVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYF CCEEEEECCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH AIIPAAFVTTYPQLRVLDIMHLTSPASAILSAVIFNALIIVALIPLALKGVTYRPLGAAS HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LLRRNLLVYGLGGVLLPFPFIKLIDMTLAALGWA HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQHSATRSMFDPALLRPAIVDSFKKLTPRTQFRNPVMFCVYVGSILTTILWIAALAGQA CCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC EAPAGFILAIALWLWFTVLFANFAEALAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE RITTATELRKGDVVLVEAGDVIPADGEVVDGVASVDESAITGESAPVIRESGGDFSSVTG EEEEHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCHHCCCCCCCCEECCCCCCCCCCC GTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKKTPNEIALTILLVALTIVMLLATAT CHHEECCEEEEEEECCCHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LLPFSMFSVEAMKAGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC RAVEAAGDVDVLLLDKTGTITLGNRQASTFVPAPGVTEEALADAAQLSSLADETPEGRSI CEEECCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEE VVLAKERFNIRQRDMGQLHATFIGFSAQTRMSGVDLPGREIRKGAADAIRNYVESHGSRF EEEEHHHCCCCHHHHHHHHHHHEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC PEEVRRAVDEVARRGSTPLVVADLHEGAARVLGVIELKDIVKGGIKERFAELRKMGIKTV HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEE MVTGDNRLTAAAIAAEAGVDDFLAEATPETKLATIREHQAAGRLVAMTGDGTNDAPALAQ EEECCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH ADVAVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYF CCEEEEECCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH AIIPAAFVTTYPQLRVLDIMHLTSPASAILSAVIFNALIIVALIPLALKGVTYRPLGAAS HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LLRRNLLVYGLGGVLLPFPFIKLIDMTLAALGWA HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA