| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is livK [C]
Identifier: 78067052
GI number: 78067052
Start: 2680729
End: 2681988
Strand: Reverse
Name: livK [C]
Synonym: Bcep18194_A5583
Alternate gene names: 78067052
Gene position: 2681988-2680729 (Counterclockwise)
Preceding gene: 78067056
Following gene: 78067051
Centisome position: 72.6
GC content: 68.89
Gene sequence:
>1260_bases ATGCAGGGGTGGAAGCGGTGTGCGCTCGCGTTGAGCGCGGGGTGGATGCTGGTGTCGTCCGCGTTTGCGGGCGGCGAGCC GGTGCGGATCGCGCTGATCGAAGGGATGTCGGGCCCGTTCGCGAATGCGGGCGCGGCGGTCGAACGCAACCTGCGCTTCG GCGTCGAGCAGGTCAACGCGGCGGGCGGCGTGAAGCTGCGCGACGGCGCGCATCCGCTCGAACTGGTGGTGCTCGACAGC AAGGGCAGCCCCGAGGAGGCACTCGTGCAGTTGCGCGCGGCCGCGGACCGCCATATCGGGTTCGTCGCGCAGGGCAACAG CTCGGCCGTCGCGGCCGCGCTCGTCGCCGCGCTCGACAAGCTGAACGCGCGCGATCCGGACAACCGGATGCTGTTCCTCA ACTATTCGGCCGACGATCCGGCGCTGACCGGCGCACGCTGCAGTTTCTGGCATTTTCGCTTCGATGCGCACGCGGGCATG CGGATGGCTGCGCTCGCGGACGTGATGGCGCGCGACCGTGCGCTCCGCAAGGTTTATCTGCTGAACCAGGACTACAGTTT CGGCCACGATGTCAGCACGCTCGCCCGGCAGGCGCTGGCCGCGCGGCGCCCGGACGTGACGATCGCCGGCGACGAATTCC ACCCGATCGGGCGGATCAAGGATTTCTCACCGTACATCGCGAAGATCCGCGCGAGCGGTGCCGACGCCGTCGTGACCGGC AACTGGGGCAACGACCTGACGCTGCTCGTGAAGGCGGCGCGCGAGCAGGGGCTGAATGCGAAGTTCTATACCTTCTACGG CAACAGCCTCGGCGCGCCGGCCGCGCTTGGCGATGCCGGTGTCGGGCGGGTCGTGGCCGTGGCGGACTGGCATCCGAACG CGGGCGGCGTGAAATCCGATGCGTTCTACCGTGCGTTCCGGAACCGTTTTCCGGCCGCCCAGGACGACTATCCGGTGCGA CGGATGAGCCTGATGATCGAGATGCTGGCCGCCGCGATGAACCGCGCGGGTTCGGCCGACCCCGTCGCGGTCGCGCGTGC GCTCGAGGGCCTGTCGTTCGACGACGGCTTCCACGCGTCGAAGATGCGCGCGCAGGATCATCAGTTGATCCAGCCCCTTT ACGTGATGGAGATGGACAAGGTCGGCACGCCGGGCGTGCGCTTCGACAACGAGGGTTCCGGCTACGGCTTCCGGACGGTG CTTGCGGTGCCGGCGCAGCGCACGGAGACGCCGTCCGCCTGCTCGATGACGCGCCCGTGA
Upstream 100 bases:
>100_bases AAAAAATCGGTGCGGATCGCCGGGCGCGCCGCGCTTGCGGGTGGCGGGCGCGCCGGCCTATGATCCGCGCTTCTCGGGCA GATTGAAGGGCAGGTGGCCG
Downstream 100 bases:
>100_bases CAGGAGGCGGTAAGAACGGCGCGGAGTTGTGCTACAATGCGCGCCGGTTGTAAGTCACGGCACGGCCATTCTTCCGTGTC CGCCTGTTCAGTTAGAAAGG
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MQGWKRCALALSAGWMLVSSAFAGGEPVRIALIEGMSGPFANAGAAVERNLRFGVEQVNAAGGVKLRDGAHPLELVVLDS KGSPEEALVQLRAAADRHIGFVAQGNSSAVAAALVAALDKLNARDPDNRMLFLNYSADDPALTGARCSFWHFRFDAHAGM RMAALADVMARDRALRKVYLLNQDYSFGHDVSTLARQALAARRPDVTIAGDEFHPIGRIKDFSPYIAKIRASGADAVVTG NWGNDLTLLVKAAREQGLNAKFYTFYGNSLGAPAALGDAGVGRVVAVADWHPNAGGVKSDAFYRAFRNRFPAAQDDYPVR RMSLMIEMLAAAMNRAGSADPVAVARALEGLSFDDGFHASKMRAQDHQLIQPLYVMEMDKVGTPGVRFDNEGSGYGFRTV LAVPAQRTETPSACSMTRP
Sequences:
>Translated_419_residues MQGWKRCALALSAGWMLVSSAFAGGEPVRIALIEGMSGPFANAGAAVERNLRFGVEQVNAAGGVKLRDGAHPLELVVLDS KGSPEEALVQLRAAADRHIGFVAQGNSSAVAAALVAALDKLNARDPDNRMLFLNYSADDPALTGARCSFWHFRFDAHAGM RMAALADVMARDRALRKVYLLNQDYSFGHDVSTLARQALAARRPDVTIAGDEFHPIGRIKDFSPYIAKIRASGADAVVTG NWGNDLTLLVKAAREQGLNAKFYTFYGNSLGAPAALGDAGVGRVVAVADWHPNAGGVKSDAFYRAFRNRFPAAQDDYPVR RMSLMIEMLAAAMNRAGSADPVAVARALEGLSFDDGFHASKMRAQDHQLIQPLYVMEMDKVGTPGVRFDNEGSGYGFRTV LAVPAQRTETPSACSMTRP >Mature_419_residues MQGWKRCALALSAGWMLVSSAFAGGEPVRIALIEGMSGPFANAGAAVERNLRFGVEQVNAAGGVKLRDGAHPLELVVLDS KGSPEEALVQLRAAADRHIGFVAQGNSSAVAAALVAALDKLNARDPDNRMLFLNYSADDPALTGARCSFWHFRFDAHAGM RMAALADVMARDRALRKVYLLNQDYSFGHDVSTLARQALAARRPDVTIAGDEFHPIGRIKDFSPYIAKIRASGADAVVTG NWGNDLTLLVKAAREQGLNAKFYTFYGNSLGAPAALGDAGVGRVVAVADWHPNAGGVKSDAFYRAFRNRFPAAQDDYPVR RMSLMIEMLAAAMNRAGSADPVAVARALEGLSFDDGFHASKMRAQDHQLIQPLYVMEMDKVGTPGVRFDNEGSGYGFRTV LAVPAQRTETPSACSMTRP
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44946; Mature: 44946
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGWKRCALALSAGWMLVSSAFAGGEPVRIALIEGMSGPFANAGAAVERNLRFGVEQVNA CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHC AGGVKLRDGAHPLELVVLDSKGSPEEALVQLRAAADRHIGFVAQGNSSAVAAALVAALDK CCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH LNARDPDNRMLFLNYSADDPALTGARCSFWHFRFDAHAGMRMAALADVMARDRALRKVYL HCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEE LNQDYSFGHDVSTLARQALAARRPDVTIAGDEFHPIGRIKDFSPYIAKIRASGADAVVTG ECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEC NWGNDLTLLVKAAREQGLNAKFYTFYGNSLGAPAALGDAGVGRVVAVADWHPNAGGVKSD CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH AFYRAFRNRFPAAQDDYPVRRMSLMIEMLAAAMNRAGSADPVAVARALEGLSFDDGFHAS HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHH KMRAQDHQLIQPLYVMEMDKVGTPGVRFDNEGSGYGFRTVLAVPAQRTETPSACSMTRP HHHHHHHHHHCHHHEEECCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MQGWKRCALALSAGWMLVSSAFAGGEPVRIALIEGMSGPFANAGAAVERNLRFGVEQVNA CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHC AGGVKLRDGAHPLELVVLDSKGSPEEALVQLRAAADRHIGFVAQGNSSAVAAALVAALDK CCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH LNARDPDNRMLFLNYSADDPALTGARCSFWHFRFDAHAGMRMAALADVMARDRALRKVYL HCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEE LNQDYSFGHDVSTLARQALAARRPDVTIAGDEFHPIGRIKDFSPYIAKIRASGADAVVTG ECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEC NWGNDLTLLVKAAREQGLNAKFYTFYGNSLGAPAALGDAGVGRVVAVADWHPNAGGVKSD CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH AFYRAFRNRFPAAQDDYPVRRMSLMIEMLAAAMNRAGSADPVAVARALEGLSFDDGFHAS HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHH KMRAQDHQLIQPLYVMEMDKVGTPGVRFDNEGSGYGFRTVLAVPAQRTETPSACSMTRP HHHHHHHHHHCHHHEEECCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA