| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066979
Identifier: 78066979
GI number: 78066979
Start: 2599104
End: 2600459
Strand: Reverse
Name: 78066979
Synonym: Bcep18194_A5510
Alternate gene names: NA
Gene position: 2600459-2599104 (Counterclockwise)
Preceding gene: 78066980
Following gene: 78066978
Centisome position: 70.39
GC content: 57.15
Gene sequence:
>1356_bases ATGGGAACTCTGATGAAGCGTTTGGTATTGGTTCCAGGGCTTGTGGCAATCATGGTATTTGCATTCGCAACGCTGATTGC AGGGCCGCGTGCAGTTGCTGCCTCATCGGCGGAAAAGGCGATTCCAGTTGTCGGAGCAGAGGCGTCCAGACCGTTCGTTG CCCAGGTCGTCGGGCTTGGCTGGATGAACCCGCTGCAGCGCAGGGATTACCCCACGGAGTGGCAGATATTGTGGACGCTG GGCTTGGTAAAGCCGAATGTCAACGATGACATGGTTCGGACCAATCCGAAAAAATATTCTACGTTACAGCCGATTTCCAT CGTGGCTGACGGTCGTTGGGGGCGTGAATCTTTTTCCGGATTCTATAAAAAATACGTCAATGAGCTGCTGATACTTTTTC GTACGCGATATTTTACGAATCAGGATTATTTTTATACGGTTAGCTCAGATGATCAGAGGAAGTGGCGGGAGTTGGCTGGA ATGCATGTTGAGCTGGCCATTCCCGCTGGTCGACTCAACCCTGCGTTTGCGGCCTCACATTTGCGAGGCCAGATTGTTAA TATTTTCGAAATTGGGAATCCGTCCGCAAAAAATCTCTGGAGCCGTGATACGCCGCCCGATGTGCACGTGACGTCAGGTC AAGGCAACGCCGGCTTCACGTCGCTGAACGCGGCACTCGACTATCTGGCCGTGCATCCGGACAAAAGCGCATGGGTGATG AACTGGGACGCGCCGAGCTTTCCGCCGCAGGACGAACAGATCAACGAGAACATGGCGGTGCTGTTCCTCGCCGGCCCGGA TCTGAAGACCGAGCGTGAGCCGCTTGCCTGGATTGGCAAGGCTGCACGAAGCAACGTCAAGGATTTCGAGGCGAAACAAG GCGCGAGCCGCGCGGTACAGGCTTGGAAATCGACGATCGATACGGCGGCGAGCAATGCGGGCGTACCCGTGTCATCGTTG AACTACGTCGTGCACGACGCAGGCAAGGGCAGCGACGCCGCATCGACGCGGATTGCCTCACTGTCGCAAACGCTGACGGA AGTGCTGCCGGAATACGACTTCCGTACGCAAACCTTCAATACGGCAGCGCTGCTAGGTGACATGGGTGCCGGCGCGGCAT TGACTGATGTGGTTCTGGCGATCGGCCGAGCGAATCACCTCGGCGGAAATGTGCTCGTAGCCGGAACGACCGACACCGAG CATCCGACGGCAGTGGTGGTGGTCGCACCGTCGAAGCTGACGCCGATCGACGCGGGCAAGAACTGGTTTCGCGCACGCGG TGAAAACAACGCGTACTTGCCGTGGTGGGGCCGCCGTCACGATGCGCGTCAGGCATCGCAAGGCTATTCGGAATAA
Upstream 100 bases:
>100_bases GCGCCGATTTGGAATTGCAGTCGCTGCGTTGCTTCTCGCGTTGGGAGCATCATTTTTGATATTGGTTTCGTCTGATGGGG CGACAGGAGCATCGTTAAGT
Downstream 100 bases:
>100_bases GGAGCCCGCATGCGCGGAATCATTCGGGTCGGCGACGCGACGAGCCACGGCGGCCAGGTCGTGACGGGCAGCGCGGTCAG TGAAGTGATGGGGCGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MGTLMKRLVLVPGLVAIMVFAFATLIAGPRAVAASSAEKAIPVVGAEASRPFVAQVVGLGWMNPLQRRDYPTEWQILWTL GLVKPNVNDDMVRTNPKKYSTLQPISIVADGRWGRESFSGFYKKYVNELLILFRTRYFTNQDYFYTVSSDDQRKWRELAG MHVELAIPAGRLNPAFAASHLRGQIVNIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSAWVM NWDAPSFPPQDEQINENMAVLFLAGPDLKTEREPLAWIGKAARSNVKDFEAKQGASRAVQAWKSTIDTAASNAGVPVSSL NYVVHDAGKGSDAASTRIASLSQTLTEVLPEYDFRTQTFNTAALLGDMGAGAALTDVVLAIGRANHLGGNVLVAGTTDTE HPTAVVVVAPSKLTPIDAGKNWFRARGENNAYLPWWGRRHDARQASQGYSE
Sequences:
>Translated_451_residues MGTLMKRLVLVPGLVAIMVFAFATLIAGPRAVAASSAEKAIPVVGAEASRPFVAQVVGLGWMNPLQRRDYPTEWQILWTL GLVKPNVNDDMVRTNPKKYSTLQPISIVADGRWGRESFSGFYKKYVNELLILFRTRYFTNQDYFYTVSSDDQRKWRELAG MHVELAIPAGRLNPAFAASHLRGQIVNIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSAWVM NWDAPSFPPQDEQINENMAVLFLAGPDLKTEREPLAWIGKAARSNVKDFEAKQGASRAVQAWKSTIDTAASNAGVPVSSL NYVVHDAGKGSDAASTRIASLSQTLTEVLPEYDFRTQTFNTAALLGDMGAGAALTDVVLAIGRANHLGGNVLVAGTTDTE HPTAVVVVAPSKLTPIDAGKNWFRARGENNAYLPWWGRRHDARQASQGYSE >Mature_450_residues GTLMKRLVLVPGLVAIMVFAFATLIAGPRAVAASSAEKAIPVVGAEASRPFVAQVVGLGWMNPLQRRDYPTEWQILWTLG LVKPNVNDDMVRTNPKKYSTLQPISIVADGRWGRESFSGFYKKYVNELLILFRTRYFTNQDYFYTVSSDDQRKWRELAGM HVELAIPAGRLNPAFAASHLRGQIVNIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSAWVMN WDAPSFPPQDEQINENMAVLFLAGPDLKTEREPLAWIGKAARSNVKDFEAKQGASRAVQAWKSTIDTAASNAGVPVSSLN YVVHDAGKGSDAASTRIASLSQTLTEVLPEYDFRTQTFNTAALLGDMGAGAALTDVVLAIGRANHLGGNVLVAGTTDTEH PTAVVVVAPSKLTPIDAGKNWFRARGENNAYLPWWGRRHDARQASQGYSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49182; Mature: 49051
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLMKRLVLVPGLVAIMVFAFATLIAGPRAVAASSAEKAIPVVGAEASRPFVAQVVGLG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHHCC WMNPLQRRDYPTEWQILWTLGLVKPNVNDDMVRTNPKKYSTLQPISIVADGRWGRESFSG CCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH FYKKYVNELLILFRTRYFTNQDYFYTVSSDDQRKWRELAGMHVELAIPAGRLNPAFAASH HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHH LRGQIVNIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSAWVM HCCCEEEEEECCCCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHEEECCCCCEEEE NWDAPSFPPQDEQINENMAVLFLAGPDLKTEREPLAWIGKAARSNVKDFEAKQGASRAVQ ECCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHH AWKSTIDTAASNAGVPVSSLNYVVHDAGKGSDAASTRIASLSQTLTEVLPEYDFRTQTFN HHHHHHHHHHCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC TAALLGDMGAGAALTDVVLAIGRANHLGGNVLVAGTTDTEHPTAVVVVAPSKLTPIDAGK HHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC NWFRARGENNAYLPWWGRRHDARQASQGYSE HHHHCCCCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure GTLMKRLVLVPGLVAIMVFAFATLIAGPRAVAASSAEKAIPVVGAEASRPFVAQVVGLG CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHHCC WMNPLQRRDYPTEWQILWTLGLVKPNVNDDMVRTNPKKYSTLQPISIVADGRWGRESFSG CCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH FYKKYVNELLILFRTRYFTNQDYFYTVSSDDQRKWRELAGMHVELAIPAGRLNPAFAASH HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHH LRGQIVNIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSAWVM HCCCEEEEEECCCCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHEEECCCCCEEEE NWDAPSFPPQDEQINENMAVLFLAGPDLKTEREPLAWIGKAARSNVKDFEAKQGASRAVQ ECCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHH AWKSTIDTAASNAGVPVSSLNYVVHDAGKGSDAASTRIASLSQTLTEVLPEYDFRTQTFN HHHHHHHHHHCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC TAALLGDMGAGAALTDVVLAIGRANHLGGNVLVAGTTDTEHPTAVVVVAPSKLTPIDAGK HHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC NWFRARGENNAYLPWWGRRHDARQASQGYSE HHHHCCCCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA