Click here to switch to the map view.

The map label for this gene is 78066931

Identifier: 78066931

GI number: 78066931

Start: 2541416

End: 2542390

Strand: Reverse

Name: 78066931

Synonym: Bcep18194_A5462

Alternate gene names: NA

Gene position: 2542390-2541416 (Counterclockwise)

Preceding gene: 78066932

Following gene: 78066930

Centisome position: 68.82

GC content: 64.62

Gene sequence:

>975_bases
ATGCTGCACCTGATCGATGCATTCGTATCGGACATCCAGACCTGGCTGTACGTCGACGTCGTGCAGCCGCTCCTCTTCAA
GTTCAACCTGATGGACTATGACGAGGACACCTACGACGCGCTGTACTGGGTGATCGTCGGCGCGCTGCAGATGGTCCTGA
TGTTCGTGCTGCTGCGCCCGCTCGAGGCGCTGCTGCCCGTCGAGCGCTGGACGAATCGCCGTGCCGTGCGGGTCGACGTG
ATCTACACGGCGATCGCGAAGCTCGGCATTTATTCGCTGTTCTTCTTCTTCGCGCTGCAGCCGCTGTTCGACAACTTCCA
GGCGTGGCTGCGCCTGCACGGCGTCGCGAACCTCAACCTCGACTACCTGTGGCCGGGCGTGACCTCGAAGCCGATCGTCA
CGTTCGCGATCTATCTCGTCGTGCTCGATTTCGCCGGCTACTGGTATCACCGCTGGCAGCACAAGTTCGGCGTCTGGTGG
GAACTGCACGCCGTGCATCACAGCCAGCGCCAGATGTCGCTGTGGTGCGACGACCGCAACCACGTGCTCGACGACGTGAT
CCAGTCGTGCTTCTTCGCGGCGATCGCGCTCGTGATCGGCGTGACGCCGTCGCAGTTCGTCGTGCTGACCGCGTTCACCA
ACTTCATGCAGAGCATTCAGCACACGAATGCGCGGCTGCCGTTCGGCTGGCTCGGCGAGCGCCTGTTCGTGAGCCCGATC
TTCCACCGCCGCCACCACGCGGTCGGCTACGGCCACGAAGGCACGAAGTACGGCTGCAACTTCGGCGTGCTGTTCCCGTG
GTGGGACATGATGTTCGGCACCGCGTCGTGGAGCCGCACGGTCGAGCCGACCGGCATCCGCGACCAGGTCGAGGGCGTGT
CCTACGGCGAAGGCTTCTGGGCGCAGCACGGCCTCGCGTTCGTGCGGATCTTCCGGCGCCTGTTCCCCGCCAAGCGCGGC
GCGGCATCGGCCTGA

Upstream 100 bases:

>100_bases
GTGCAGACGATCGCTGTCGGCCGCTCGCCGCACGGCATCTATTTCTACGACCGCGCGCCGTGGCGCGCCGCGAACGGCGC
GTGACGGGCGGGGGAGAACG

Downstream 100 bases:

>100_bases
TCCGGCCATTCCTGCGTTGAGCGGCTCTCCCACGCGGCCCGCATGTGCTTTGGCGCATGCGGGCCGCGTGGTTTATCCTT
TCCCCGTTTTTCTCCGTCGA

Product: sterol desaturase-like

Products: NA

Alternate protein names: Sterol Desaturase; Transmembrane Protein; Sterol Desaturase-Related Protein; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein; TRAP Dicarboxylate Transporter DctM Subunit; Yhhn Family Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Transmembrane Protein; C-5 Sterol Desaturase

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLHLIDAFVSDIQTWLYVDVVQPLLFKFNLMDYDEDTYDALYWVIVGALQMVLMFVLLRPLEALLPVERWTNRRAVRVDV
IYTAIAKLGIYSLFFFFALQPLFDNFQAWLRLHGVANLNLDYLWPGVTSKPIVTFAIYLVVLDFAGYWYHRWQHKFGVWW
ELHAVHHSQRQMSLWCDDRNHVLDDVIQSCFFAAIALVIGVTPSQFVVLTAFTNFMQSIQHTNARLPFGWLGERLFVSPI
FHRRHHAVGYGHEGTKYGCNFGVLFPWWDMMFGTASWSRTVEPTGIRDQVEGVSYGEGFWAQHGLAFVRIFRRLFPAKRG
AASA

Sequences:

>Translated_324_residues
MLHLIDAFVSDIQTWLYVDVVQPLLFKFNLMDYDEDTYDALYWVIVGALQMVLMFVLLRPLEALLPVERWTNRRAVRVDV
IYTAIAKLGIYSLFFFFALQPLFDNFQAWLRLHGVANLNLDYLWPGVTSKPIVTFAIYLVVLDFAGYWYHRWQHKFGVWW
ELHAVHHSQRQMSLWCDDRNHVLDDVIQSCFFAAIALVIGVTPSQFVVLTAFTNFMQSIQHTNARLPFGWLGERLFVSPI
FHRRHHAVGYGHEGTKYGCNFGVLFPWWDMMFGTASWSRTVEPTGIRDQVEGVSYGEGFWAQHGLAFVRIFRRLFPAKRG
AASA
>Mature_324_residues
MLHLIDAFVSDIQTWLYVDVVQPLLFKFNLMDYDEDTYDALYWVIVGALQMVLMFVLLRPLEALLPVERWTNRRAVRVDV
IYTAIAKLGIYSLFFFFALQPLFDNFQAWLRLHGVANLNLDYLWPGVTSKPIVTFAIYLVVLDFAGYWYHRWQHKFGVWW
ELHAVHHSQRQMSLWCDDRNHVLDDVIQSCFFAAIALVIGVTPSQFVVLTAFTNFMQSIQHTNARLPFGWLGERLFVSPI
FHRRHHAVGYGHEGTKYGCNFGVLFPWWDMMFGTASWSRTVEPTGIRDQVEGVSYGEGFWAQHGLAFVRIFRRLFPAKRG
AASA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37711; Mature: 37711

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLIDAFVSDIQTWLYVDVVQPLLFKFNLMDYDEDTYDALYWVIVGALQMVLMFVLLRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEALLPVERWTNRRAVRVDVIYTAIAKLGIYSLFFFFALQPLFDNFQAWLRLHGVANLNL
HHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
DYLWPGVTSKPIVTFAIYLVVLDFAGYWYHRWQHKFGVWWELHAVHHSQRQMSLWCDDRN
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHEEECCCH
HVLDDVIQSCFFAAIALVIGVTPSQFVVLTAFTNFMQSIQHTNARLPFGWLGERLFVSPI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHH
FHRRHHAVGYGHEGTKYGCNFGVLFPWWDMMFGTASWSRTVEPTGIRDQVEGVSYGEGFW
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHH
AQHGLAFVRIFRRLFPAKRGAASA
HHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLHLIDAFVSDIQTWLYVDVVQPLLFKFNLMDYDEDTYDALYWVIVGALQMVLMFVLLRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEALLPVERWTNRRAVRVDVIYTAIAKLGIYSLFFFFALQPLFDNFQAWLRLHGVANLNL
HHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
DYLWPGVTSKPIVTFAIYLVVLDFAGYWYHRWQHKFGVWWELHAVHHSQRQMSLWCDDRN
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHEEECCCH
HVLDDVIQSCFFAAIALVIGVTPSQFVVLTAFTNFMQSIQHTNARLPFGWLGERLFVSPI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHH
FHRRHHAVGYGHEGTKYGCNFGVLFPWWDMMFGTASWSRTVEPTGIRDQVEGVSYGEGFW
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHH
AQHGLAFVRIFRRLFPAKRGAASA
HHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA