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The map label for this gene is fdx [H]

Identifier: 78066896

GI number: 78066896

Start: 2496961

End: 2497302

Strand: Reverse

Name: fdx [H]

Synonym: Bcep18194_A5427

Alternate gene names: 78066896

Gene position: 2497302-2496961 (Counterclockwise)

Preceding gene: 78066897

Following gene: 78066895

Centisome position: 67.6

GC content: 60.82

Gene sequence:

>342_bases
ATGCCTCAACTGGTGGTGCTGCCTCACGTCGAACTGTGCCCGGATGGCGCAGTGATCGACGCGACGCCCGGCAAGAGTAT
CTGCGACAACCTGCTCGAACACGGGATCGAGATCGAGCATGCATGCGAGAAATCGTGCGCGTGCACGACGTGCCACGTGG
TGATCCGCGAAGGCTTCAACGACCTGACGCCGTCCGAGGAGGACGAGGACGATCTGCTGGACAAGGCGTGGGGCCTCGAG
CCGACGTCGCGCTTGTCGTGCCAGGCAATCGTGAAGGAAGATTCGGACCTGGTGGTCGAGATTCCGAAGTACTCGATCAA
CCACGCGAAGGAAAACCACTGA

Upstream 100 bases:

>100_bases
GACGAAATCTGAACTCACGAACTGCGCATGGGCCGGGGACGGCCCGCGCGATAATGAACCGTGCGGCGCCTGGCGCCGCA
CCCTGACTGACGGAACGGAC

Downstream 100 bases:

>100_bases
CAGGAACCGGAGGCAGGCGATGAAATGGACCGATTCGCGTGAAATAGCCATTGCGCTGGCGGACAAGCACCCGGACATCG
ACCCGCAGCGGATCAACTTC

Product: ferredoxin, 2Fe-2S type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPQLVVLPHVELCPDGAVIDATPGKSICDNLLEHGIEIEHACEKSCACTTCHVVIREGFNDLTPSEEDEDDLLDKAWGLE
PTSRLSCQAIVKEDSDLVVEIPKYSINHAKENH

Sequences:

>Translated_113_residues
MPQLVVLPHVELCPDGAVIDATPGKSICDNLLEHGIEIEHACEKSCACTTCHVVIREGFNDLTPSEEDEDDLLDKAWGLE
PTSRLSCQAIVKEDSDLVVEIPKYSINHAKENH
>Mature_112_residues
PQLVVLPHVELCPDGAVIDATPGKSICDNLLEHGIEIEHACEKSCACTTCHVVIREGFNDLTPSEEDEDDLLDKAWGLEP
TSRLSCQAIVKEDSDLVVEIPKYSINHAKENH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=93, Percent_Identity=40.8602150537634, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788874, Length=112, Percent_Identity=68.75, Blast_Score=162, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17544202, Length=93, Percent_Identity=37.6344086021505, Blast_Score=63, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325004, Length=86, Percent_Identity=43.0232558139535, Blast_Score=72, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24661503, Length=94, Percent_Identity=43.6170212765958, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12434; Mature: 12303

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLVVLPHVELCPDGAVIDATPGKSICDNLLEHGIEIEHACEKSCACTTCHVVIREGFN
CCCEEECCCCEECCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCC
DLTPSEEDEDDLLDKAWGLEPTSRLSCQAIVKEDSDLVVEIPKYSINHAKENH
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHEECCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PQLVVLPHVELCPDGAVIDATPGKSICDNLLEHGIEIEHACEKSCACTTCHVVIREGFN
CCEEECCCCEECCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCC
DLTPSEEDEDDLLDKAWGLEPTSRLSCQAIVKEDSDLVVEIPKYSINHAKENH
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHEECCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]