Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78066877

Identifier: 78066877

GI number: 78066877

Start: 2475568

End: 2476425

Strand: Reverse

Name: 78066877

Synonym: Bcep18194_A5408

Alternate gene names: NA

Gene position: 2476425-2475568 (Counterclockwise)

Preceding gene: 78066881

Following gene: 78066876

Centisome position: 67.04

GC content: 71.1

Gene sequence:

>858_bases
ATGAGCATGGAGTCTTCTTCTTTCCGCAATGCGCGTGCCTGCGTGCGCCGCGCCGCGCTTGCCGCGCTGCGCGACGCCGA
ACCCGTGGCCAAGGCTGCCCAGGTGCGCGCGCTCTACGATGCGCTGCTGGCCGGGCAGGCGGTGATCGCCCCGTCGCTCG
AATTGCCCGAGCCGGCCGATCTGCCCGGGCGCCCGGCGCGTCCGCCGCTCGTCGAGCCGCGCCAGCTCGAGCGGCGCAGC
ATGCGTTCGCCCGCAGGGCGCGCCGTGCTGCTGCACGCGCTGGCCCATATCGAGTTCAATGCGATCAACCTGGCGCTCGA
CGCGGTCTGGCGCTTCACGGGCCTGCCGGCCCCGTTCTACGCGGACTGGCTGAAGGTCGCGGCCGAGGAGGCCTATCACT
TCACGCTGCTGTCCGACCGCCTGGCGGCATTCGGGCATGCGTACGGCGATTTTCCCGCGCACAACGGTCTGTGGGACATG
TGCGAACGGACCAAGGGCGACGTGCTGGCGCGCATGGCGCTCGTGCCGCGCACGCTCGAGGCCCGCGGGCTCGATGCATC
GCCGCCGATCCGCGCGCGGCTCGTGCAGGCGGGCGACGATGCGTCGGCCGCGATCCTCGACGTGATCCTGCGCGACGAAA
TCGGCCATGTCGCGATCGGCAACCGCTGGTTCCGGCATCTGTGCGACGGAGCCGGCCACGATCCCGTGCCGACCTACCGG
CGCCTCGCCGAGCAGTACCATGCGCCACGGCTGCGTGGCCCGTTCAATTTCGATGCGCGCCGCGATGCCGGATTCGAGCA
GGCCGAACTCGACGAACTGGCCGCGCAGGACGTGGTGGACGGCAACGCGCCACGCTAG

Upstream 100 bases:

>100_bases
TGGTTTGCCCGGCGCATTCGCATGCGCCGCGGAACAATCGCCTATTGTAAACCGTCGCGTGCGTACGCTCCCGCGATGCG
CACGCAGGGTGTCCCCGTTT

Downstream 100 bases:

>100_bases
CCGGCTCGCGCTCGGCCGCGTTTCGATTGCCGCCAGCCGTTCCTGGGCCCCCGGCGCATGGTGCTCCCTCATGGCCTGTT
GCGTGCGGGTGTTGCTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSMESSSFRNARACVRRAALAALRDAEPVAKAAQVRALYDALLAGQAVIAPSLELPEPADLPGRPARPPLVEPRQLERRS
MRSPAGRAVLLHALAHIEFNAINLALDAVWRFTGLPAPFYADWLKVAAEEAYHFTLLSDRLAAFGHAYGDFPAHNGLWDM
CERTKGDVLARMALVPRTLEARGLDASPPIRARLVQAGDDASAAILDVILRDEIGHVAIGNRWFRHLCDGAGHDPVPTYR
RLAEQYHAPRLRGPFNFDARRDAGFEQAELDELAAQDVVDGNAPR

Sequences:

>Translated_285_residues
MSMESSSFRNARACVRRAALAALRDAEPVAKAAQVRALYDALLAGQAVIAPSLELPEPADLPGRPARPPLVEPRQLERRS
MRSPAGRAVLLHALAHIEFNAINLALDAVWRFTGLPAPFYADWLKVAAEEAYHFTLLSDRLAAFGHAYGDFPAHNGLWDM
CERTKGDVLARMALVPRTLEARGLDASPPIRARLVQAGDDASAAILDVILRDEIGHVAIGNRWFRHLCDGAGHDPVPTYR
RLAEQYHAPRLRGPFNFDARRDAGFEQAELDELAAQDVVDGNAPR
>Mature_284_residues
SMESSSFRNARACVRRAALAALRDAEPVAKAAQVRALYDALLAGQAVIAPSLELPEPADLPGRPARPPLVEPRQLERRSM
RSPAGRAVLLHALAHIEFNAINLALDAVWRFTGLPAPFYADWLKVAAEEAYHFTLLSDRLAAFGHAYGDFPAHNGLWDMC
ERTKGDVLARMALVPRTLEARGLDASPPIRARLVQAGDDASAAILDVILRDEIGHVAIGNRWFRHLCDGAGHDPVPTYRR
LAEQYHAPRLRGPFNFDARRDAGFEQAELDELAAQDVVDGNAPR

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 31273; Mature: 31142

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMESSSFRNARACVRRAALAALRDAEPVAKAAQVRALYDALLAGQAVIAPSLELPEPAD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
LPGRPARPPLVEPRQLERRSMRSPAGRAVLLHALAHIEFNAINLALDAVWRFTGLPAPFY
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ADWLKVAAEEAYHFTLLSDRLAAFGHAYGDFPAHNGLWDMCERTKGDVLARMALVPRTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH
ARGLDASPPIRARLVQAGDDASAAILDVILRDEIGHVAIGNRWFRHLCDGAGHDPVPTYR
HCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHH
RLAEQYHAPRLRGPFNFDARRDAGFEQAELDELAAQDVVDGNAPR
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SMESSSFRNARACVRRAALAALRDAEPVAKAAQVRALYDALLAGQAVIAPSLELPEPAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
LPGRPARPPLVEPRQLERRSMRSPAGRAVLLHALAHIEFNAINLALDAVWRFTGLPAPFY
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ADWLKVAAEEAYHFTLLSDRLAAFGHAYGDFPAHNGLWDMCERTKGDVLARMALVPRTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH
ARGLDASPPIRARLVQAGDDASAAILDVILRDEIGHVAIGNRWFRHLCDGAGHDPVPTYR
HCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHH
RLAEQYHAPRLRGPFNFDARRDAGFEQAELDELAAQDVVDGNAPR
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]