Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is yejA [C]

Identifier: 78066840

GI number: 78066840

Start: 2433756

End: 2435627

Strand: Reverse

Name: yejA [C]

Synonym: Bcep18194_A5371

Alternate gene names: 78066840

Gene position: 2435627-2433756 (Counterclockwise)

Preceding gene: 78066841

Following gene: 78066839

Centisome position: 65.93

GC content: 67.47

Gene sequence:

>1872_bases
ATGACGAAGGGTTCGCCCCGGGCCGCCGGCACGCGTGTCCGCCGTGCCGTACGGGCCGCCGGCCGCACGGCAGCAGTGTT
CGTGCTGCAGGCGGTGCTGGCCGCGACCGCTGCGCATGCGGTCTACGCCATTGCGCAGTACGGCGAGCCGAAGTATCCGC
CGGGCTTCAAGCATTTCGACTACGTCAACCCCGACGCGCCGAAGGGCGGCACGCTGGTGCTCGCGAACCCGAACCGGCTG
ACGTCGTTCGACAAGTTCAACCCGTTCACGATGCGCGGCAATCCCGCGCCGGGCATCGACATGCTGTTCGAGAGCCTCGC
GACCGGCAGTTCGGACGAGCCGGCATCCGCATACGGGCTGCTTGCCGACGACATCGACATCGCGCCGGACCGCCGCTCGG
TCACGTTCCACCTGAATCCGCGCGCGCGCTTCTCGAATGGCGACCGCGTCACCGCCGACGACGTCAAGTTCTCGTTCGAC
ACGCTGAAGAGCAAGCAGGCCGCGCCGCAGTTCGGCGCGTATTTCGCGGAGCTCGCGAAGGCCGTGGTCGTCGACCCGGC
CACCGTGCGCTTCGAGTTCCGCAGCGCGAACCGCGAACTGCCGCTGATCGCCGGCGGCGTGCCGGTGTTTTCCCGCAAGT
GGGGATTGCGCGCGGACGGCTCGCGCATCCCGTTCGACCAGCTCGCGTTCGAGCAGCCGATCGGCAGCGGCCCGTACCTG
ATCGACCATTACGACAACGGCCGGACGATCACTTACCGGCGTAACCCGGCGTACTGGGGCGCCGACCTGCCGGTGCGGGT
GGGCACCAACAACTTCGAGCGGATCGTCTACAAGCTGTATGGCGACGGCGTCGCGCGGCTCGAGGCGTTCAAAGCCGGCG
AATACGACGTGCTCGTCGAGTACATCGCGCGCAACTGGACACGCCGCGACGTCGGCAAGCGTTTCGACAACGGCGAGCTC
GTCAAGCGCGAATTCCGCCAGCACAACGGCGCCGGCATGCAGGGCTTCTTCATGAACCTGCGCCGGCCGCTGTTTCGCGA
CGTGCGCGTGCGTCAGGCGCTCGACCTCGCATTCGACTTCGAATGGCTGAACCGCCAGCTGTTCTACAGCGCCTACACGC
GCATGGACAGCTACTTCGCCGACACCGACCTGCAGGCGACCGGCACGCCCGGCCCCGGCGAGCTGAAGCTGCTGGAGCCG
CTGCGCGCGCAGCTCGACCCGGCCGTGTTCGGCCCGATGGTCACGCAGCCGAACACGAACCCGCCGGGCTCGCTGCGCGC
GAACCTGCTGAAGGCGCGCGCACTGCTCGCGCAGGCCGGCTGGACCTATCGCGACGGCGCGCTGCGCAATGAGAAGGGCG
AGCCGTTTACGTTCGAGATCCTCGACGATTCGGGCGCGGCGATGGAAGGGATCGTGGCTGCGTACCAGCGCAATCTGGCG
AAGCTCGGCATCGACGCACGTTTTCGCACGGCCGATTACGCGCTCCTGCAAAAGCGTCTCGACGCGTTCGACTACGACAT
GACGACGATCCGTTTGCCGGGCGTGCAGGTGCCGGGTGCCGAGCAATACTCGCGTTATGCGAGCAAGTTCGCCGACGAGC
CGGGCTCCGACAACTTCATCGGACTGAAGTCGCCGGCCGTCGACGCATTGCTGCACGCACTCGGCACCGCGCAGACGCGC
GACGACCTGCTCGATGCGACGCACGCGCTCGACCGCGTGCTGATGCACGGCTACTACGCAGTCCCGCAGTGGTACAGCAC
GACGCACCGGGTCGCGTACAAGCGCACGCTTGCCTATCCGCAGACGCTGCCGCTGTACTATTCGGCCGAGGGCTGGGTCG
TGTCGACCTGGTGGGCGAAGCCCGATCACTGA

Upstream 100 bases:

>100_bases
CGTGAAGAAACCGCCCGCGTGGCGGTTTTCTTTTGGCTCGCCGGCTTGAGTGGGTAGAATCGTCCCTCGTTACTACCCTC
ATTCGACCGACAAGGCCTCT

Downstream 100 bases:

>100_bases
GCCACGCCGCCCCTACGTCCAACCCCGCCTACCGAACGCGAGTCGACGCCCTATGTGGAGCTACATCCTCAAACGCCTGC
TGCTGATGATCCCGACGCTC

Product: ABC transporter, periplasmic ligand binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MTKGSPRAAGTRVRRAVRAAGRTAAVFVLQAVLAATAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRL
TSFDKFNPFTMRGNPAPGIDMLFESLATGSSDEPASAYGLLADDIDIAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFD
TLKSKQAAPQFGAYFAELAKAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPYL
IDHYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWTRRDVGKRFDNGEL
VKREFRQHNGAGMQGFFMNLRRPLFRDVRVRQALDLAFDFEWLNRQLFYSAYTRMDSYFADTDLQATGTPGPGELKLLEP
LRAQLDPAVFGPMVTQPNTNPPGSLRANLLKARALLAQAGWTYRDGALRNEKGEPFTFEILDDSGAAMEGIVAAYQRNLA
KLGIDARFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFIGLKSPAVDALLHALGTAQTR
DDLLDATHALDRVLMHGYYAVPQWYSTTHRVAYKRTLAYPQTLPLYYSAEGWVVSTWWAKPDH

Sequences:

>Translated_623_residues
MTKGSPRAAGTRVRRAVRAAGRTAAVFVLQAVLAATAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRL
TSFDKFNPFTMRGNPAPGIDMLFESLATGSSDEPASAYGLLADDIDIAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFD
TLKSKQAAPQFGAYFAELAKAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPYL
IDHYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWTRRDVGKRFDNGEL
VKREFRQHNGAGMQGFFMNLRRPLFRDVRVRQALDLAFDFEWLNRQLFYSAYTRMDSYFADTDLQATGTPGPGELKLLEP
LRAQLDPAVFGPMVTQPNTNPPGSLRANLLKARALLAQAGWTYRDGALRNEKGEPFTFEILDDSGAAMEGIVAAYQRNLA
KLGIDARFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFIGLKSPAVDALLHALGTAQTR
DDLLDATHALDRVLMHGYYAVPQWYSTTHRVAYKRTLAYPQTLPLYYSAEGWVVSTWWAKPDH
>Mature_622_residues
TKGSPRAAGTRVRRAVRAAGRTAAVFVLQAVLAATAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRLT
SFDKFNPFTMRGNPAPGIDMLFESLATGSSDEPASAYGLLADDIDIAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFDT
LKSKQAAPQFGAYFAELAKAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPYLI
DHYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWTRRDVGKRFDNGELV
KREFRQHNGAGMQGFFMNLRRPLFRDVRVRQALDLAFDFEWLNRQLFYSAYTRMDSYFADTDLQATGTPGPGELKLLEPL
RAQLDPAVFGPMVTQPNTNPPGSLRANLLKARALLAQAGWTYRDGALRNEKGEPFTFEILDDSGAAMEGIVAAYQRNLAK
LGIDARFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFIGLKSPAVDALLHALGTAQTRD
DLLDATHALDRVLMHGYYAVPQWYSTTHRVAYKRTLAYPQTLPLYYSAEGWVVSTWWAKPDH

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=589, Percent_Identity=37.0118845500849, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69471; Mature: 69340

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS01310 FXYD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGSPRAAGTRVRRAVRAAGRTAAVFVLQAVLAATAAHAVYAIAQYGEPKYPPGFKHFD
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
YVNPDAPKGGTLVLANPNRLTSFDKFNPFTMRGNPAPGIDMLFESLATGSSDEPASAYGL
CCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCHHHCE
LADDIDIAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFDTLKSKQAAPQFGAYFAELAK
EECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEHHHHHHHHCCCCHHHHHHHHHHH
AVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPYL
HHEECCCEEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEE
IDHYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVE
EEEECCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
YIARNWTRRDVGKRFDNGELVKREFRQHNGAGMQGFFMNLRRPLFRDVRVRQALDLAFDF
HHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWLNRQLFYSAYTRMDSYFADTDLQATGTPGPGELKLLEPLRAQLDPAVFGPMVTQPNTN
HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCC
PPGSLRANLLKARALLAQAGWTYRDGALRNEKGEPFTFEILDDSGAAMEGIVAAYQRNLA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
KLGIDARFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFI
HHCCCCEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEE
GLKSPAVDALLHALGTAQTRDDLLDATHALDRVLMHGYYAVPQWYSTTHRVAYKRTLAYP
ECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCCC
QTLPLYYSAEGWVVSTWWAKPDH
CCCCEEECCCCCEEEEECCCCCC
>Mature Secondary Structure 
TKGSPRAAGTRVRRAVRAAGRTAAVFVLQAVLAATAAHAVYAIAQYGEPKYPPGFKHFD
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
YVNPDAPKGGTLVLANPNRLTSFDKFNPFTMRGNPAPGIDMLFESLATGSSDEPASAYGL
CCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCHHHCE
LADDIDIAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFDTLKSKQAAPQFGAYFAELAK
EECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEHHHHHHHHCCCCHHHHHHHHHHH
AVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPYL
HHEECCCEEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEE
IDHYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVE
EEEECCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
YIARNWTRRDVGKRFDNGELVKREFRQHNGAGMQGFFMNLRRPLFRDVRVRQALDLAFDF
HHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWLNRQLFYSAYTRMDSYFADTDLQATGTPGPGELKLLEPLRAQLDPAVFGPMVTQPNTN
HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCC
PPGSLRANLLKARALLAQAGWTYRDGALRNEKGEPFTFEILDDSGAAMEGIVAAYQRNLA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
KLGIDARFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFI
HHCCCCEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEE
GLKSPAVDALLHALGTAQTRDDLLDATHALDRVLMHGYYAVPQWYSTTHRVAYKRTLAYP
ECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCCC
QTLPLYYSAEGWVVSTWWAKPDH
CCCCEEECCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA