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The map label for this gene is alr

Identifier: 78066817

GI number: 78066817

Start: 2407605

End: 2408675

Strand: Reverse

Name: alr

Synonym: Bcep18194_A5348

Alternate gene names: 78066817

Gene position: 2408675-2407605 (Counterclockwise)

Preceding gene: 78066820

Following gene: 78066816

Centisome position: 65.2

GC content: 68.44

Gene sequence:

>1071_bases
ATGCCGCGCCCGATCTCCGCCACCATCCATACCGCCGCTCTCGCGAACAATCTCTCCGTCGTCCGCCGCTTTGCCGGCCC
GTCCAAGGTCTGGGCGGTCGTCAAGGCCAACGCGTACGGTCACGGTCTCGCCCGCGCGTTTCCTGGCCTGCGCGGCACCG
ACGGCTTCGGCCTGCTCGACCTAGACGAGGCCGTCAAGCTGCGCGAGCTCGGCTGGGCCGGCCCGATCCTGTTGCTCGAA
GGGTTCTTCCGCTCGACTGACATCGACGTGATCGACCGCTACAGCCTGACGACGACCGTCCACAACGACGAGCAGATGCG
GATGCTGGAGACGGCGCGGCTGTCGAAGCCCGTCAACGTGCAGCTCAAGATGAACAGCGGGATGAACCGGCTCGGCTACC
TGCCGGAAAAATACCGCGCCGCATGGGAGCGCGCCCGCGCGTGCCACGGCATCGGCCAGATCACGTTGATGACCCATTTT
TCGGATGCGGACAACGAGCGCGGCGTCGCCGAGCAGCTCGCGACGTTCGAGCGCGGCGCGGAAAACATTGCCGGTGCGCG
CAGCCTCGCGAACTCCGCAGCCGTGCTGTGGCATCCGGACACGCACTTCGATTGGGTGCGCCCGGGGATCGTGCTGTACG
GCGCGTCGCCGTCCGGGTTGTCGTCCGACATCGCCGATACCGGGCTGAAGCCTGCGATGACGCTCGCGTCCGAGCTGATC
GCGGTGCAGACGATCGCGAAGGGCCAGGCCATCGGCTATGGCTCGACGTTCTCCGCGCAGGCGCCGATGCGGATCGGCGT
GGTCGCGTGCGGTTACGCGGACGGCTATCCGCGGGTCGCGCCCGAAGGCACGCCCGTGATCGTCGACGGCATCCGCACGC
GGATCGTCGGTCGCGTATCGATGGACATGATCACCGTCGACCTGTCCCCGTGCCCGCAGGCCGGTGTCGGCGCGCGCGTC
GAGCTGTGGGGCAACGCGCTGCCGATCGACGACGTCGCCCGCCATTGCGGCACGATCGGTTACGAGCTGATGTGCGCGGT
CGCCGGCCGCGTGCCCGTGCGCGCGGAATAA

Upstream 100 bases:

>100_bases
GGACTAGCAAGATTCCCCGATCGTTCCGCAAATTGTCGGCTTCAGTGCTCAAAAGGCGCGGTAAGCTGATGATTCGCAAG
CGTCTTTACGTAAATTTCCC

Downstream 100 bases:

>100_bases
GGGCGTCGCGCGTGGCCAAACAGAAAACCGTATACGTCTGCAGCGAGTGCGGCGGACAGACCCCGAAGTGGCAGGGCCAA
TGCCCGTCGTGCCAGGCCTG

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MPRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDLDEAVKLRELGWAGPILLLE
GFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNVQLKMNSGMNRLGYLPEKYRAAWERARACHGIGQITLMTHF
SDADNERGVAEQLATFERGAENIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLASELI
AVQTIAKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVSMDMITVDLSPCPQAGVGARV
ELWGNALPIDDVARHCGTIGYELMCAVAGRVPVRAE

Sequences:

>Translated_356_residues
MPRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDLDEAVKLRELGWAGPILLLE
GFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNVQLKMNSGMNRLGYLPEKYRAAWERARACHGIGQITLMTHF
SDADNERGVAEQLATFERGAENIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLASELI
AVQTIAKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVSMDMITVDLSPCPQAGVGARV
ELWGNALPIDDVARHCGTIGYELMCAVAGRVPVRAE
>Mature_355_residues
PRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDLDEAVKLRELGWAGPILLLEG
FFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNVQLKMNSGMNRLGYLPEKYRAAWERARACHGIGQITLMTHFS
DADNERGVAEQLATFERGAENIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLASELIA
VQTIAKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVSMDMITVDLSPCPQAGVGARVE
LWGNALPIDDVARHCGTIGYELMCAVAGRVPVRAE

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1787439, Length=353, Percent_Identity=57.2237960339943, Blast_Score=442, Evalue=1e-125,
Organism=Escherichia coli, GI1790487, Length=352, Percent_Identity=45.4545454545455, Blast_Score=298, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 38180; Mature: 38049

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEE
LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECEEEEEEECCCHHHHHHHHHHCCCCCEE
QLKMNSGMNRLGYLPEKYRAAWERARACHGIGQITLMTHFSDADNERGVAEQLATFERGA
EEEECCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
ENIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLASELI
HHHHHHHHHCCCCEEEECCCCCCCEECCCEEEECCCCCCCCCHHHHCCCCHHHHHHHHHH
AVQTIAKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVS
HHHHHHCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHEEE
MDMITVDLSPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCAVAGRVPVRAE
EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PRPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEE
LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECEEEEEEECCCHHHHHHHHHHCCCCCEE
QLKMNSGMNRLGYLPEKYRAAWERARACHGIGQITLMTHFSDADNERGVAEQLATFERGA
EEEECCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
ENIAGARSLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLASELI
HHHHHHHHHCCCCEEEECCCCCCCEECCCEEEECCCCCCCCCHHHHCCCCHHHHHHHHHH
AVQTIAKGQAIGYGSTFSAQAPMRIGVVACGYADGYPRVAPEGTPVIVDGIRTRIVGRVS
HHHHHHCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHEEE
MDMITVDLSPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCAVAGRVPVRAE
EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA