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The map label for this gene is crtB [H]

Identifier: 78066714

GI number: 78066714

Start: 2298340

End: 2299251

Strand: Direct

Name: crtB [H]

Synonym: Bcep18194_A5245

Alternate gene names: 78066714

Gene position: 2298340-2299251 (Clockwise)

Preceding gene: 78066708

Following gene: 78066718

Centisome position: 62.22

GC content: 69.19

Gene sequence:

>912_bases
ATGCTAGAATGCCGCGCTCGACGTTTCGGCACCGCGCCGCCGCGCGTCCCCCGAACCCGCCCCCACACGATTCCGCCCGT
GAACTTCGACGACTACTGTCAGCAAAAGGCCGCCCCTGCGGGCTCCAGCGTCTACTACGCGCTGCGCCAGGCGCCGCTCG
CCACGCAGCCGCGCCTGACCGCGCTGTTCGCGCTGCGCCGCGAACTCGAGGAAACCGTCAAGGAAACCAGCGACCCGACC
GTCGGACACACGAAGCTCGCGTGGTGGCACAAGGAACTCGCGGCGCTGGCCGACGGACAGCCTTCGCACCCGGTCACGAA
GGCGCTCGCCAAGCATCACCCGGCGATCGCCGCCGAAGCCGATGCGTTGCGTACGCTCGTCAACGGTTACGGGATGGATC
TCGAACAGGCGCGCTACCTCGATCTCGCGAACCTGCAGCGCTATATCGCGCAGGTCGGCGGCACTTTCGCGTCGCTGGTC
GCGCGCGCAAGTTCGGCAAACCCGGCGGACCCGCAACCGTGGGCCGCGGACGCCGGCCGCGCGCTGATGCTCGCGCAATT
CGTGCAGGACCTCGGTAACGATGCGCGCCACGGCCGCATCTACCTGCCGATCGACGAACTGCAGCGCTACAACGTGACCG
CGGCCGATCTGCTGAACCGCCGCTACAGTCCGGCCTTCACCGAATTGCTGCAATTCCAGACGGCCCGCGCGCGCGAAGCA
CTCGTGGCCGCCGAAGCGGCGATCCCGGCATCCGAACGCCGCGCCCAGCGCACGCTGCGCGCGCAGCTCGCACTGGCCGC
TTCGCTGCTCGACGAAATCGAACGCGACGGCTACCAGGTGCTGCATCAGCGCATCGCGCTGACGCCGATCCGCAAGCTGT
GGATCGCGTGGCGCACCGCGCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
TCGCGCCGGCTTGTAACCGGCACGCCCGATCAGGCGAGCGCGAGATTCTACCCGATCCGTACGAGCTTGTCTCGCCCCCG
CCGGCACCCATCGTGCAGCG

Downstream 100 bases:

>100_bases
TCCTCGCTCCTCACGCCTTCAACAACGGCAGCGTATCGAAGCGCTGCTGCAGCACGCGGGTCGCGTCGAGCCCCCACCAC
GGCCCGAGCACGGTCGCGTA

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLECRARRFGTAPPRVPRTRPHTIPPVNFDDYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPT
VGHTKLAWWHKELAALADGQPSHPVTKALAKHHPAIAAEADALRTLVNGYGMDLEQARYLDLANLQRYIAQVGGTFASLV
ARASSANPADPQPWAADAGRALMLAQFVQDLGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
LVAAEAAIPASERRAQRTLRAQLALAASLLDEIERDGYQVLHQRIALTPIRKLWIAWRTARRR

Sequences:

>Translated_303_residues
MLECRARRFGTAPPRVPRTRPHTIPPVNFDDYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPT
VGHTKLAWWHKELAALADGQPSHPVTKALAKHHPAIAAEADALRTLVNGYGMDLEQARYLDLANLQRYIAQVGGTFASLV
ARASSANPADPQPWAADAGRALMLAQFVQDLGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
LVAAEAAIPASERRAQRTLRAQLALAASLLDEIERDGYQVLHQRIALTPIRKLWIAWRTARRR
>Mature_303_residues
MLECRARRFGTAPPRVPRTRPHTIPPVNFDDYCQQKAAPAGSSVYYALRQAPLATQPRLTALFALRRELEETVKETSDPT
VGHTKLAWWHKELAALADGQPSHPVTKALAKHHPAIAAEADALRTLVNGYGMDLEQARYLDLANLQRYIAQVGGTFASLV
ARASSANPADPQPWAADAGRALMLAQFVQDLGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
LVAAEAAIPASERRAQRTLRAQLALAASLLDEIERDGYQVLHQRIALTPIRKLWIAWRTARRR

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 33778; Mature: 33778

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLECRARRFGTAPPRVPRTRPHTIPPVNFDDYCQQKAAPAGSSVYYALRQAPLATQPRLT
CCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH
ALFALRRELEETVKETSDPTVGHTKLAWWHKELAALADGQPSHPVTKALAKHHPAIAAEA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
DALRTLVNGYGMDLEQARYLDLANLQRYIAQVGGTFASLVARASSANPADPQPWAADAGR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCHH
ALMLAQFVQDLGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
HHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVAAEAAIPASERRAQRTLRAQLALAASLLDEIERDGYQVLHQRIALTPIRKLWIAWRTA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRR
CCC
>Mature Secondary Structure
MLECRARRFGTAPPRVPRTRPHTIPPVNFDDYCQQKAAPAGSSVYYALRQAPLATQPRLT
CCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH
ALFALRRELEETVKETSDPTVGHTKLAWWHKELAALADGQPSHPVTKALAKHHPAIAAEA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
DALRTLVNGYGMDLEQARYLDLANLQRYIAQVGGTFASLVARASSANPADPQPWAADAGR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCHH
ALMLAQFVQDLGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
HHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVAAEAAIPASERRAQRTLRAQLALAASLLDEIERDGYQVLHQRIALTPIRKLWIAWRTA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA