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The map label for this gene is dadA [H]

Identifier: 78066685

GI number: 78066685

Start: 2266671

End: 2267972

Strand: Direct

Name: dadA [H]

Synonym: Bcep18194_A5216

Alternate gene names: 78066685

Gene position: 2266671-2267972 (Clockwise)

Preceding gene: 78066682

Following gene: 78066686

Centisome position: 61.36

GC content: 72.04

Gene sequence:

>1302_bases
ATGGATGTCATCGTCATCGGCGGCGGAATCAGCGGCGTCGCCACCGCCTACCAGTTGCGCGCGGCCGGCCATCGCGTGTG
CGTGGTCGAACGCCACGCGACCGTCGCGCAAGGTGCAACCTACGGCGACGGCGGCGCACTGCTGCCGAGCCCGCTCGACG
TCTGGTTCGGCCCGACCTTCATGCGCCAGCGCCAGCCGCGCGACACCGGCATCGTCTACAAGCCGGGCTTCAACGGCGGC
GTGCGCCGCTTCGTCAAGCAGCTCGGCACGCTGCGCGAGCCCGACGCGTTCGCCGCCCAGTACGCGCGGCTGCGCCCGCT
GATCGACGCGTCGCGCGACACGCTCGCCGACATCGAGACGCGCCTCGAGCTCGAATTCGAACAGAAGCCCGGCATCCTGC
ACGTGGTGCGCGACCCGCGCGACTGGGACGCGATGCAGCCCGCGCTCGACCTGCTGCGCACGCTCGACCAGCCGTACCGC
CTGCTCTCCGCCGACGAATGCGCGGTGCTCGAGCCGTCCGTGCCGGCCGAGCCCGGCTTCGCCGGCGGCGTGCTGCTCGA
AACCGAACGCACCGGCAATTGCCCGCTGTTCGCGAAACTGGTCAAGCAGACGCTCGACGAGCATGGCGTGCAGTTTCGCT
TCGGCGCGGAAGTCGCCGCGATCCGCGTCGATACCGGCCGCGCCGCGGTCGAGCTCGTCCCGCCCGGCGACCGGCGCGCG
TCGAACGCTCGCGAGGTCGACGTGATTTCCGCCGATGCGATCGTGGTCGCCGCCGGCGCCGGCAGCCTGCCGCTGCTCGA
CCGGCTCGGCTGGCGCCTGCCGCTGCACCCGGTGCGCGTCCATACGCTCACCGCACCGGTCGCCTACGAAGAACACGCAC
CGCACCTGAACGTCATCGATTCGATCAAGCGGATCTCGATCACGCGCACCCACCAGCGGCTGCGCGTCGGCGGCGGCGCC
GTACTGCAAAGCCTGCCCGACACCGCGAAGCCGCTCGCCGAACCGCTGTCCGAGGCCGCACTCGCGCTGCTCGGCCAGGC
CGTCCACGACTGGGTGCCCGGCGCCGCGCGGATCTCGGCCGCGCTGTCGTGGCAAGGCACGCAGTTGCTGTCACCGGACG
GCCTGCCGGTCGTCGGTCCGACCCCGCATCCGCGCGTGTTCGTCAATTTCGGGCACGGCCCGGCCGGCTGGGGGCTCGCA
TGCGGGTCTGCTAAAGTGGTGACCGACTACCTGGGCGGCGACGTGCAGCACTGGCCCGCCGACACGCTCGCCGCGCTGCG
CGCCGGGCGCTTCACGACCTGA

Upstream 100 bases:

>100_bases
CCCGCGATTTTGGCGCTATCATTCCGGGTTCACCGGGCCGGGGCCCTCAGCGAATTCTCACCGGGTGGCGCACACGCGCC
GCCCGTCATCGAAGCAATCC

Downstream 100 bases:

>100_bases
CCGCCGCGGGCCCGTCCGCGGCGGCCTCCTTGCCAGCCGCCACGACCCCGCGATGACCGTTACCCGCCCGCTCCCCGATT
CCGATCCGATCGCGCTGCTG

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMRQRQPRDTGIVYKPGFNGG
VRRFVKQLGTLREPDAFAAQYARLRPLIDASRDTLADIETRLELEFEQKPGILHVVRDPRDWDAMQPALDLLRTLDQPYR
LLSADECAVLEPSVPAEPGFAGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGAEVAAIRVDTGRAAVELVPPGDRRA
SNAREVDVISADAIVVAAGAGSLPLLDRLGWRLPLHPVRVHTLTAPVAYEEHAPHLNVIDSIKRISITRTHQRLRVGGGA
VLQSLPDTAKPLAEPLSEAALALLGQAVHDWVPGAARISAALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLA
CGSAKVVTDYLGGDVQHWPADTLAALRAGRFTT

Sequences:

>Translated_433_residues
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMRQRQPRDTGIVYKPGFNGG
VRRFVKQLGTLREPDAFAAQYARLRPLIDASRDTLADIETRLELEFEQKPGILHVVRDPRDWDAMQPALDLLRTLDQPYR
LLSADECAVLEPSVPAEPGFAGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGAEVAAIRVDTGRAAVELVPPGDRRA
SNAREVDVISADAIVVAAGAGSLPLLDRLGWRLPLHPVRVHTLTAPVAYEEHAPHLNVIDSIKRISITRTHQRLRVGGGA
VLQSLPDTAKPLAEPLSEAALALLGQAVHDWVPGAARISAALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLA
CGSAKVVTDYLGGDVQHWPADTLAALRAGRFTT
>Mature_433_residues
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMRQRQPRDTGIVYKPGFNGG
VRRFVKQLGTLREPDAFAAQYARLRPLIDASRDTLADIETRLELEFEQKPGILHVVRDPRDWDAMQPALDLLRTLDQPYR
LLSADECAVLEPSVPAEPGFAGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGAEVAAIRVDTGRAAVELVPPGDRRA
SNAREVDVISADAIVVAAGAGSLPLLDRLGWRLPLHPVRVHTLTAPVAYEEHAPHLNVIDSIKRISITRTHQRLRVGGGA
VLQSLPDTAKPLAEPLSEAALALLGQAVHDWVPGAARISAALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLA
CGSAKVVTDYLGGDVQHWPADTLAALRAGRFTT

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=445, Percent_Identity=29.2134831460674, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46391; Mature: 46391

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTF
CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCCHHHCCCHH
MRQRQPRDTGIVYKPGFNGGVRRFVKQLGTLREPDAFAAQYARLRPLIDASRDTLADIET
HHCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
RLELEFEQKPGILHVVRDPRDWDAMQPALDLLRTLDQPYRLLSADECAVLEPSVPAEPGF
EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCEEECCCCCCCCCC
AGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGAEVAAIRVDTGRAAVELVPPGDRRA
CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCEEEEEECCCCCCC
SNAREVDVISADAIVVAAGAGSLPLLDRLGWRLPLHPVRVHTLTAPVAYEEHAPHLNVID
CCCCEEEEEECCEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEECCCCHHCCCCCCCHHH
SIKRISITRTHQRLRVGGGAVLQSLPDTAKPLAEPLSEAALALLGQAVHDWVPGAARISA
HHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHE
ALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLACGSAKVVTDYLGGDVQHWPA
EEEECCCEEECCCCCEECCCCCCCEEEEECCCCCCCCCEECCCHHHHHHHHCCCCCCCCH
DTLAALRAGRFTT
HHHHHHHCCCCCC
>Mature Secondary Structure
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTF
CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCCHHHCCCHH
MRQRQPRDTGIVYKPGFNGGVRRFVKQLGTLREPDAFAAQYARLRPLIDASRDTLADIET
HHCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
RLELEFEQKPGILHVVRDPRDWDAMQPALDLLRTLDQPYRLLSADECAVLEPSVPAEPGF
EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCEEECCCCCCCCCC
AGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGAEVAAIRVDTGRAAVELVPPGDRRA
CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCEEEEEECCCCCCC
SNAREVDVISADAIVVAAGAGSLPLLDRLGWRLPLHPVRVHTLTAPVAYEEHAPHLNVID
CCCCEEEEEECCEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEECCCCHHCCCCCCCHHH
SIKRISITRTHQRLRVGGGAVLQSLPDTAKPLAEPLSEAALALLGQAVHDWVPGAARISA
HHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHE
ALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLACGSAKVVTDYLGGDVQHWPA
EEEECCCEEECCCCCEECCCCCCCEEEEECCCCCCCCCEECCCHHHHHHHHCCCCCCCCH
DTLAALRAGRFTT
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA