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The map label for this gene is ydhO [H]

Identifier: 78066636

GI number: 78066636

Start: 2214767

End: 2215861

Strand: Direct

Name: ydhO [H]

Synonym: Bcep18194_A5167

Alternate gene names: 78066636

Gene position: 2214767-2215861 (Clockwise)

Preceding gene: 78066635

Following gene: 78066647

Centisome position: 59.95

GC content: 70.05

Gene sequence:

>1095_bases
ATGCTTCGAATCTGGGTTCCCGTTGCTGTCGTTTCACTGCTTGCGGCCTGCTCCAGCGTGCCGCCGCAGTCGGCATCGCG
CCCCGCCTCGGGCATGAAGATCACGACACCGCGCGCATTCCCCGCCCCCGCCAATTTCCCGAAGTTCGTCGATCACAGCG
TCGGCCAGGAAGAAATCTCGATCCAGGCGATGAGCCTCGTCGGCGTCCCGTATCGCTGGGGCGGCAACACGCCGACCAGC
GGCTTCGACTGCAGCGGGCTCGTGCGCTACGTGATCGGCCGTGCGGCCGACGTGAACCTGCCGCGCACGACGGCCGACAT
GAGCGGCCGCGGCGTGTCGATCGATCCCGACCAGATCGCGCCGGGCGACCTGATCTTCTTCAATACGACCGGGCGGCCGC
ATTCGCACGTCGGCATCTATGTCGGCAAGCTGCGCTTCGTCAACGCACCGTCGACGGGCGGCACCGTGCGGCTCGACTAC
CTGACGAATCCTTACTGGGCCAAGCGTTTCGACGGCATTCGCCGCGTCGTGCCGCCGCGCGGGGCGCCTACGCCGTTCGA
TGCGCCGACCTATGAAGCCAAGCGTGACGAGCCGCGCAGCGCGCCCGTCGTGGCGCCCGCCCCGGTGGTCGTGACTGCCG
CCGCGCCGCGGCAGCCGGCCTATACGTCGTCGCAAGCTGCTGCGACCCAGGCACCTGCACCGGTCATGCCGTCCCCGCAG
GTCGTATCGACCGCAGCGGTTGCCCCCGCAGCCGCGTCGGCCGACCCGTATGAACCACCGCCGCCGCGCATGCAGGCGGC
CCAGCAGCAGGCTACGTCCGTGAATGACGGTACGGGCAGCGCCGCGATGACGGCGAATGCCGCACCGGCCGGCCCGGCTG
AGGCCGGCACACAGATTCCGACGACGGCGCTGACTGCCGCCCAGGCTGCTGCTTTCGATGCGGAGCCGCCGTCCGCCGCC
GCCGCGGCGTCACCGCGCAGTGTCGAGCCCGCCCCCGTTCAGGTACTACGTGCGTCGACCCAATCCGCGCCCGCCAGCCC
GCGCACCGCCACCGCTGACGATCCGATTGCCCGGTTCGCGAACGGAAGTTACTAG

Upstream 100 bases:

>100_bases
AATTCTCAAGAATGGTTGCTTAAGCCCCGCCGGAGCGTCTACCATCGGGTCTGTCTGTTGTCATACGATTCGCGAGCGCG
CCGCGCTTGCCCGCCTTGCC

Downstream 100 bases:

>100_bases
CCCGCTTCGCCCTCGCCTGCGGCCACCCGCGACCGCAGCCGCTCTTCGCCGCACCTTCCCGCACCCCAAAAGAAAATGCG
CCGCAGCCTTTCGGCTTGCG

Product: NLP/P60 family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MLRIWVPVAVVSLLAACSSVPPQSASRPASGMKITTPRAFPAPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTS
GFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSIDPDQIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKRFDGIRRVVPPRGAPTPFDAPTYEAKRDEPRSAPVVAPAPVVVTAAAPRQPAYTSSQAAATQAPAPVMPSPQ
VVSTAAVAPAAASADPYEPPPPRMQAAQQQATSVNDGTGSAAMTANAAPAGPAEAGTQIPTTALTAAQAAAFDAEPPSAA
AAASPRSVEPAPVQVLRASTQSAPASPRTATADDPIARFANGSY

Sequences:

>Translated_364_residues
MLRIWVPVAVVSLLAACSSVPPQSASRPASGMKITTPRAFPAPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTS
GFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSIDPDQIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKRFDGIRRVVPPRGAPTPFDAPTYEAKRDEPRSAPVVAPAPVVVTAAAPRQPAYTSSQAAATQAPAPVMPSPQ
VVSTAAVAPAAASADPYEPPPPRMQAAQQQATSVNDGTGSAAMTANAAPAGPAEAGTQIPTTALTAAQAAAFDAEPPSAA
AAASPRSVEPAPVQVLRASTQSAPASPRTATADDPIARFANGSY
>Mature_364_residues
MLRIWVPVAVVSLLAACSSVPPQSASRPASGMKITTPRAFPAPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTS
GFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSIDPDQIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKRFDGIRRVVPPRGAPTPFDAPTYEAKRDEPRSAPVVAPAPVVVTAAAPRQPAYTSSQAAATQAPAPVMPSPQ
VVSTAAVAPAAASADPYEPPPPRMQAAQQQATSVNDGTGSAAMTANAAPAGPAEAGTQIPTTALTAAQAAAFDAEPPSAA
AAASPRSVEPAPVQVLRASTQSAPASPRTATADDPIARFANGSY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=122, Percent_Identity=40.9836065573771, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1786421, Length=148, Percent_Identity=35.8108108108108, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1788501, Length=175, Percent_Identity=33.7142857142857, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1788001, Length=119, Percent_Identity=41.1764705882353, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 37422; Mature: 37422

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIWVPVAVVSLLAACSSVPPQSASRPASGMKITTPRAFPAPANFPKFVDHSVGQEEIS
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHE
IQAMSLVGVPYRWGGNTPTSGFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSIDPDQIA
EEEEEEECCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKRFDGIRRVVPPR
CCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
GAPTPFDAPTYEAKRDEPRSAPVVAPAPVVVTAAAPRQPAYTSSQAAATQAPAPVMPSPQ
CCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCH
VVSTAAVAPAAASADPYEPPPPRMQAAQQQATSVNDGTGSAAMTANAAPAGPAEAGTQIP
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHCCCCCC
TTALTAAQAAAFDAEPPSAAAAASPRSVEPAPVQVLRASTQSAPASPRTATADDPIARFA
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
NGSY
CCCC
>Mature Secondary Structure
MLRIWVPVAVVSLLAACSSVPPQSASRPASGMKITTPRAFPAPANFPKFVDHSVGQEEIS
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHE
IQAMSLVGVPYRWGGNTPTSGFDCSGLVRYVIGRAADVNLPRTTADMSGRGVSIDPDQIA
EEEEEEECCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKRFDGIRRVVPPR
CCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
GAPTPFDAPTYEAKRDEPRSAPVVAPAPVVVTAAAPRQPAYTSSQAAATQAPAPVMPSPQ
CCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCH
VVSTAAVAPAAASADPYEPPPPRMQAAQQQATSVNDGTGSAAMTANAAPAGPAEAGTQIP
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHCCCCCC
TTALTAAQAAAFDAEPPSAAAAASPRSVEPAPVQVLRASTQSAPASPRTATADDPIARFA
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
NGSY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]