| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is arnT [H]
Identifier: 78066627
GI number: 78066627
Start: 2204539
End: 2206215
Strand: Direct
Name: arnT [H]
Synonym: Bcep18194_A5158
Alternate gene names: 78066627
Gene position: 2204539-2206215 (Clockwise)
Preceding gene: 78066626
Following gene: 78066628
Centisome position: 59.68
GC content: 66.85
Gene sequence:
>1677_bases ATGAACGATACGCCGTCGAGGCTACCGCTCAATCGCATCACGCTCGTCCTCCTCGTCGTCGCACTCGCGATCGTCTGGTT CGCGCCGCTCGGGCTGCGCCACCTGATCCCGAGCGACGAAGGCCGCTACGCGGAAATGGCGCGCGAGATGTTCGTCACCG GCGACTGGATCACGCCGCGCTACAACGGCTACAAGTATTTCGAGAAGCCGCCGCTGCAAACCTGGCTGAACGCGCTCACG TTCGCGTGGTTCGGCATCGGCGAATGGCAGGCGCGCCTCTACACGGCCGTCGCGAGCTTCGCCGGCATCCTGCTGGTCGG CTACACCGGCGCGCGCCTGTTTAACCCGCTGTCGGGCTTCCTCGCCGCCGTCGTGCTCGCGTCGTCGCCGTACTGGAACC TGATGGGCCACTTCAACGCGCTCGACATGGGGCTCGCGTTCTGGATGTCGCTGTCGCTGTGCTCGCTGCTGCTCGCGCAG CGGCCCGGGCTGCGCCCGGCCGCGGCACGCGGCTGGATGTGGGCGTGCTGGGGCGCGATGGCGTTCGCGGTGCTATCGAA GGGCCTCGTCGGCCTGATCCTGCCCGGCGCCGTGCTCGTGCTCTATACGCTGATCGCACGCGACTGGGCGCTCTGGAAGC GCCTGTACCTGGTGAGCGGCCTCGTGATCTTCTTCGCGATCGTCACGCCGTGGTTCGTGCTCGTCCAGCAGCGCAATCCC GAATTCTTCAACTTCTTCTTCATCGTCCAGCAGTTCCGCCGGTACCTGACCCCGGAACAGAACCGCCCGGGCCCGGTTTA CTACTTCGTGCCCGTGCTGCTGGTCGGCTTCCTGCCGTGGCTGTCGGTCGCGTGGCAGAGCCTCCGCCATGCGCTGCGGA TGCCGCGCCAGCCGAATGGCTTCGCGCCGATGCTCGTGCTGCTGATCTGGAGCGCATTCATCTTCCTGTTCTTCAGCGCG TCGCATTCGAAGCTGATCTCGTACGTGCTGCCGATCGCGCCGGCGCTCGCGCTGGTCATCGGCGCGTACCTGCCGCTGAT CAGCGCCGACCGGTTCCGCCGCCACCTGCTCGGCTACCTCGTATTCATCGTCGTCGCGGCGTTCGGGATCATCTTCCTCG CGTACCAGGGCGATGCCCGCACGCCGAACGCGCAGTACCGCGCGTTCCAGATGTGGCTGTACGGGGGCCTCGCAGTCGCA GCCGTACTGACGCTCGCGGCCGCCTGGCTGAACCGCCGCACGGGCGTCGCTGCCGCGCTCGCCGCGTTCGGCGCCGCCTG GCTCGCGTTCGGCACGATCGGCGGCACCGGTCATGACGAATTCGGCCGCTACAGCTCGGGCGCGCTGCTCGCACCGGCCG TGCGCGCCGAACTGGCGAAGCTGCCGCCCGACACGCCGTTCTACTCGGTCGAAATGCTCGATCACACGTTCCCGTTCTAT ATGGGCCACACGACGATCATGGTCCAGCGCCAGGACGAGCTCGCGTTCGGGATCTCGATGGAGCCGAACAAGTGGATTCC GACCGTCGACGAGTGGATCACGCGCTGGAAACAGGAAACCCATGCGCTCGCGATCATGTCGCCCGGCCAGTACGACACCC TGGTCAAGCAAGGCGTGCCGATGCGCGTGGTCGCGCGCGACAACCGCCGCGTGATCGTCGAGAAACCGCAATCGTAA
Upstream 100 bases:
>100_bases CGGCGCAGCGGGTCGATCCCCCGGATCGGCCCGGCCAGGCCGCCCGCCCCCGGCGCAACCCGCCGGCGGCCCGTCACAAT AACCAACAGGCTGAAAATCC
Downstream 100 bases:
>100_bases GGACGCCTGCCGCATGAATCCCGTTTCGTTCGTCTGCATCATCACCGGCGTGATGCTCAACGCCTGTGCGCAACTTCTGC TGAAAGCCGGCGTCAACGCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MNDTPSRLPLNRITLVLLVVALAIVWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNALT FAWFGIGEWQARLYTAVASFAGILLVGYTGARLFNPLSGFLAAVVLASSPYWNLMGHFNALDMGLAFWMSLSLCSLLLAQ RPGLRPAAARGWMWACWGAMAFAVLSKGLVGLILPGAVLVLYTLIARDWALWKRLYLVSGLVIFFAIVTPWFVLVQQRNP EFFNFFFIVQQFRRYLTPEQNRPGPVYYFVPVLLVGFLPWLSVAWQSLRHALRMPRQPNGFAPMLVLLIWSAFIFLFFSA SHSKLISYVLPIAPALALVIGAYLPLISADRFRRHLLGYLVFIVVAAFGIIFLAYQGDARTPNAQYRAFQMWLYGGLAVA AVLTLAAAWLNRRTGVAAALAAFGAAWLAFGTIGGTGHDEFGRYSSGALLAPAVRAELAKLPPDTPFYSVEMLDHTFPFY MGHTTIMVQRQDELAFGISMEPNKWIPTVDEWITRWKQETHALAIMSPGQYDTLVKQGVPMRVVARDNRRVIVEKPQS
Sequences:
>Translated_558_residues MNDTPSRLPLNRITLVLLVVALAIVWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNALT FAWFGIGEWQARLYTAVASFAGILLVGYTGARLFNPLSGFLAAVVLASSPYWNLMGHFNALDMGLAFWMSLSLCSLLLAQ RPGLRPAAARGWMWACWGAMAFAVLSKGLVGLILPGAVLVLYTLIARDWALWKRLYLVSGLVIFFAIVTPWFVLVQQRNP EFFNFFFIVQQFRRYLTPEQNRPGPVYYFVPVLLVGFLPWLSVAWQSLRHALRMPRQPNGFAPMLVLLIWSAFIFLFFSA SHSKLISYVLPIAPALALVIGAYLPLISADRFRRHLLGYLVFIVVAAFGIIFLAYQGDARTPNAQYRAFQMWLYGGLAVA AVLTLAAAWLNRRTGVAAALAAFGAAWLAFGTIGGTGHDEFGRYSSGALLAPAVRAELAKLPPDTPFYSVEMLDHTFPFY MGHTTIMVQRQDELAFGISMEPNKWIPTVDEWITRWKQETHALAIMSPGQYDTLVKQGVPMRVVARDNRRVIVEKPQS >Mature_558_residues MNDTPSRLPLNRITLVLLVVALAIVWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPLQTWLNALT FAWFGIGEWQARLYTAVASFAGILLVGYTGARLFNPLSGFLAAVVLASSPYWNLMGHFNALDMGLAFWMSLSLCSLLLAQ RPGLRPAAARGWMWACWGAMAFAVLSKGLVGLILPGAVLVLYTLIARDWALWKRLYLVSGLVIFFAIVTPWFVLVQQRNP EFFNFFFIVQQFRRYLTPEQNRPGPVYYFVPVLLVGFLPWLSVAWQSLRHALRMPRQPNGFAPMLVLLIWSAFIFLFFSA SHSKLISYVLPIAPALALVIGAYLPLISADRFRRHLLGYLVFIVVAAFGIIFLAYQGDARTPNAQYRAFQMWLYGGLAVA AVLTLAAAWLNRRTGVAAALAAFGAAWLAFGTIGGTGHDEFGRYSSGALLAPAVRAELAKLPPDTPFYSVEMLDHTFPFY MGHTTIMVQRQDELAFGISMEPNKWIPTVDEWITRWKQETHALAIMSPGQYDTLVKQGVPMRVVARDNRRVIVEKPQS
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=343, Percent_Identity=30.0291545189504, Blast_Score=140, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 62692; Mature: 62692
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTPSRLPLNRITLVLLVVALAIVWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC YNGYKYFEKPPLQTWLNALTFAWFGIGEWQARLYTAVASFAGILLVGYTGARLFNPLSGF CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAAVVLASSPYWNLMGHFNALDMGLAFWMSLSLCSLLLAQRPGLRPAAARGWMWACWGAM HHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHH AFAVLSKGLVGLILPGAVLVLYTLIARDWALWKRLYLVSGLVIFFAIVTPWFVLVQQRNP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFFNFFFIVQQFRRYLTPEQNRPGPVYYFVPVLLVGFLPWLSVAWQSLRHALRMPRQPNG CHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FAPMLVLLIWSAFIFLFFSASHSKLISYVLPIAPALALVIGAYLPLISADRFRRHLLGYL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFIVVAAFGIIFLAYQGDARTPNAQYRAFQMWLYGGLAVAAVLTLAAAWLNRRTGVAAAL HHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFGAAWLAFGTIGGTGHDEFGRYSSGALLAPAVRAELAKLPPDTPFYSVEMLDHTFPFY HHHHHHHHHHHCCCCCCCHHCCCCCCCCEEHHHHHHHHHHCCCCCCCEEHHHHHCCCCHH MGHTTIMVQRQDELAFGISMEPNKWIPTVDEWITRWKQETHALAIMSPGQYDTLVKQGVP CCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCC MRVVARDNRRVIVEKPQS EEEEECCCCEEEEECCCC >Mature Secondary Structure MNDTPSRLPLNRITLVLLVVALAIVWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC YNGYKYFEKPPLQTWLNALTFAWFGIGEWQARLYTAVASFAGILLVGYTGARLFNPLSGF CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAAVVLASSPYWNLMGHFNALDMGLAFWMSLSLCSLLLAQRPGLRPAAARGWMWACWGAM HHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHH AFAVLSKGLVGLILPGAVLVLYTLIARDWALWKRLYLVSGLVIFFAIVTPWFVLVQQRNP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFFNFFFIVQQFRRYLTPEQNRPGPVYYFVPVLLVGFLPWLSVAWQSLRHALRMPRQPNG CHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FAPMLVLLIWSAFIFLFFSASHSKLISYVLPIAPALALVIGAYLPLISADRFRRHLLGYL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFIVVAAFGIIFLAYQGDARTPNAQYRAFQMWLYGGLAVAAVLTLAAAWLNRRTGVAAAL HHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFGAAWLAFGTIGGTGHDEFGRYSSGALLAPAVRAELAKLPPDTPFYSVEMLDHTFPFY HHHHHHHHHHHCCCCCCCHHCCCCCCCCEEHHHHHHHHHHCCCCCCCEEHHHHHCCCCHH MGHTTIMVQRQDELAFGISMEPNKWIPTVDEWITRWKQETHALAIMSPGQYDTLVKQGVP CCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCC MRVVARDNRRVIVEKPQS EEEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA