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The map label for this gene is yhfC [H]

Identifier: 78066494

GI number: 78066494

Start: 2058430

End: 2059218

Strand: Reverse

Name: yhfC [H]

Synonym: Bcep18194_A5025

Alternate gene names: 78066494

Gene position: 2059218-2058430 (Counterclockwise)

Preceding gene: 78066495

Following gene: 78066493

Centisome position: 55.74

GC content: 69.84

Gene sequence:

>789_bases
ATGACTGTCGCCCCCATCACGCTGGCGGTGCTGATCGCCGCCACGCTGATCATCGCGCTCCTGCCGCTCGTCCTCTTCCG
TCTCCTGCGCAAGCCGCTGGCGCTGAACCGCCGCGACACGATCGTCGGCGTGGCCGTCTTCACGCTGTTTGCGATGATCC
TCGAACGCGCGTTCCACGGGCTCGTGCTGAGCCAGACGCCGCCGGATGGCTGGCTCACGCAGCCGCTCGCGTTCGTCGCG
TACAGCGCGCTCGCAACCGCCGTATTCGAGGAAGTCGGCCGCTATCTCGGGATGCGTTTCCTGAACCGCCGCTATGGCCC
GTCGGCCGGCGACGGCCGCGGAATCGGCTACGGGATCGGTCACGGTGGCGCCGAAGCATGGTTCGTCGGCGTCCTCGTGT
GGGGCCAGTGGTCGTATCTCGCGTGGCTCGCGAGCCGCGGCCAGCTGGAGACCCAGCTCGCCGACCTGCCGGGCGATACC
GTCGTGCGGCTGCACGTGATGCTCGCGACGCTGTCGGCACAGTCGATCCTGCTGTTGCTGCTCGAACGCTGCGCGGCATT
CGTGCTGCAGCTCGCGCTGTCGGTGCTGGTCTGGCGCGGCGTGCGTGCCGGCCGCGCGGGCGTGTTGCCGCTCGCGATCG
TGCTGCATGCGCTCGCGGCCGCACCGGCGCTGCTGTACCAGGTGCGCGTGCTGCCGGCCGGCTGGGTCGAGGCCGTGTAT
TTCGTGCTGGCCGCGATCCTGGTCGTCGTGCTGGTGAAGGCATGCCGGCCGTCGCAATCGGCAGCCTGA

Upstream 100 bases:

>100_bases
GCTGTTGCCGGGCGAGCTGGTTGCGCGCGCGTCGACCGCAAGCTGAGTATCATTCGGGGCACGCAGCGCGTCAGGTGCGC
TGCCCCGAACAAGGAAATAC

Downstream 100 bases:

>100_bases
CGGGAGAGACGGGATGGATGACTATCTGATCGAATGCCAGAGCGCGGAATTCGACGCGCTCGCACGCGTGATCTGCGACC
TCTTTCCGGAGCAGACGCGT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTVAPITLAVLIAATLIIALLPLVLFRLLRKPLALNRRDTIVGVAVFTLFAMILERAFHGLVLSQTPPDGWLTQPLAFVA
YSALATAVFEEVGRYLGMRFLNRRYGPSAGDGRGIGYGIGHGGAEAWFVGVLVWGQWSYLAWLASRGQLETQLADLPGDT
VVRLHVMLATLSAQSILLLLLERCAAFVLQLALSVLVWRGVRAGRAGVLPLAIVLHALAAAPALLYQVRVLPAGWVEAVY
FVLAAILVVVLVKACRPSQSAA

Sequences:

>Translated_262_residues
MTVAPITLAVLIAATLIIALLPLVLFRLLRKPLALNRRDTIVGVAVFTLFAMILERAFHGLVLSQTPPDGWLTQPLAFVA
YSALATAVFEEVGRYLGMRFLNRRYGPSAGDGRGIGYGIGHGGAEAWFVGVLVWGQWSYLAWLASRGQLETQLADLPGDT
VVRLHVMLATLSAQSILLLLLERCAAFVLQLALSVLVWRGVRAGRAGVLPLAIVLHALAAAPALLYQVRVLPAGWVEAVY
FVLAAILVVVLVKACRPSQSAA
>Mature_261_residues
TVAPITLAVLIAATLIIALLPLVLFRLLRKPLALNRRDTIVGVAVFTLFAMILERAFHGLVLSQTPPDGWLTQPLAFVAY
SALATAVFEEVGRYLGMRFLNRRYGPSAGDGRGIGYGIGHGGAEAWFVGVLVWGQWSYLAWLASRGQLETQLADLPGDTV
VRLHVMLATLSAQSILLLLLERCAAFVLQLALSVLVWRGVRAGRAGVLPLAIVLHALAAAPALLYQVRVLPAGWVEAVYF
VLAAILVVVLVKACRPSQSAA

Specific function: Unknown

COG id: COG4377

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011397 [H]

Pfam domain/function: PF10086 DUF2324 [H]

EC number: NA

Molecular weight: Translated: 28140; Mature: 28009

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TVAPITLAVLIAATLIIALLPLVLFRLLRKPLALNRRDTIVGVAVFTLFAMILERAFHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
LVLSQTPPDGWLTQPLAFVAYSALATAVFEEVGRYLGMRFLNRRYGPSAGDGRGIGYGIG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HGGAEAWFVGVLVWGQWSYLAWLASRGQLETQLADLPGDTVVRLHVMLATLSAQSILLLL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LERCAAFVLQLALSVLVWRGVRAGRAGVLPLAIVLHALAAAPALLYQVRVLPAGWVEAVY
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FVLAAILVVVLVKACRPSQSAA
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]