| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066486
Identifier: 78066486
GI number: 78066486
Start: 2052765
End: 2053547
Strand: Direct
Name: 78066486
Synonym: Bcep18194_A5017
Alternate gene names: NA
Gene position: 2052765-2053547 (Clockwise)
Preceding gene: 78066484
Following gene: 78066487
Centisome position: 55.57
GC content: 69.09
Gene sequence:
>783_bases ATGCAATCCCTGCCCGCCCATCGCCCGCCGCACTGGCTGAACAAGGTGCCCGACGTCGCGCTGTCGTTCTGGATCATCAA GATCATGTCGACCACGGTCGGCGAAACCGGCGCGGACTTTCTCGCGGTCAACGCGGGGCTCGGCCAGACCGTCACGCGCG TCGCGATGGCGTCGCTGCTCGCGATCGCGCTGTGGCTGCAGTTGCGCACGCGCCGCTACGTGCCGTGGATCTACTGGCTC ACGGTGGTGCTGGTCAGCATCGTCGGCACGCAGATCACCGACCTGCTCACCGACGGCCTGAACGTCAGCCTCTATGCGAG CACCGCCGCGTTTGCCGTCGGGCTCGCCGCGATCTTCTTCGTGTGGCATCGCGTCGAAGGCACGCTGTCGATCGACACGA TCGTCACGCCACGGCGCGAGCTGTTCTACTGGGCCGCGATTCTCTGCACGTTCGCGCTGGGCACCGCCGCGGGCGATCTC GCCACCGAGGCGCTCGGTCTGGGCTTCACGCTCGGCGCGCTGTGCTTCGGCGGTCTGATCGCGGCCGTGTTCGCGGCGTG GCGGCTCGGTGCCAACGCGGTGCTGGCGTTCTGGATCGCTTACATCCTGACGCGCCCGTTCGGCGCGTCGCTCGGCGACC TGCTCACGCAGGCCCGCACCTATGGCGGGCTCGGCTTCGGCGCCGCCTGGACGAGCCTGCTGTTCCTCACCGTGATCGTG CTGCTCGTCGCCGTCGCGCAGTTCGGCAGCGGCCCGCGCACGCGTGCCGGTACCGCCGAATGA
Upstream 100 bases:
>100_bases CGAAACGACGTTTTTTTCCCGCTGCCGGCCTCGCTATGGCTGGCCTAAGTCTCGGGTTTCAGACTGCATGCCGACCACCC GATTGCCAAGGAGGCATCGC
Downstream 100 bases:
>100_bases CGCCCGTTCCTTTCCGTTCTTCCCATTCATCGAATCGAGGACTCGCCATGCGCATCCCCCATCCCGTTTCCCGTCTCGCC GTTGCGGCGGCCACGATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MQSLPAHRPPHWLNKVPDVALSFWIIKIMSTTVGETGADFLAVNAGLGQTVTRVAMASLLAIALWLQLRTRRYVPWIYWL TVVLVSIVGTQITDLLTDGLNVSLYASTAAFAVGLAAIFFVWHRVEGTLSIDTIVTPRRELFYWAAILCTFALGTAAGDL ATEALGLGFTLGALCFGGLIAAVFAAWRLGANAVLAFWIAYILTRPFGASLGDLLTQARTYGGLGFGAAWTSLLFLTVIV LLVAVAQFGSGPRTRAGTAE
Sequences:
>Translated_260_residues MQSLPAHRPPHWLNKVPDVALSFWIIKIMSTTVGETGADFLAVNAGLGQTVTRVAMASLLAIALWLQLRTRRYVPWIYWL TVVLVSIVGTQITDLLTDGLNVSLYASTAAFAVGLAAIFFVWHRVEGTLSIDTIVTPRRELFYWAAILCTFALGTAAGDL ATEALGLGFTLGALCFGGLIAAVFAAWRLGANAVLAFWIAYILTRPFGASLGDLLTQARTYGGLGFGAAWTSLLFLTVIV LLVAVAQFGSGPRTRAGTAE >Mature_260_residues MQSLPAHRPPHWLNKVPDVALSFWIIKIMSTTVGETGADFLAVNAGLGQTVTRVAMASLLAIALWLQLRTRRYVPWIYWL TVVLVSIVGTQITDLLTDGLNVSLYASTAAFAVGLAAIFFVWHRVEGTLSIDTIVTPRRELFYWAAILCTFALGTAAGDL ATEALGLGFTLGALCFGGLIAAVFAAWRLGANAVLAFWIAYILTRPFGASLGDLLTQARTYGGLGFGAAWTSLLFLTVIV LLVAVAQFGSGPRTRAGTAE
Specific function: Unknown
COG id: COG4705
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27794; Mature: 27794
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLPAHRPPHWLNKVPDVALSFWIIKIMSTTVGETGADFLAVNAGLGQTVTRVAMASLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHH AIALWLQLRTRRYVPWIYWLTVVLVSIVGTQITDLLTDGLNVSLYASTAAFAVGLAAIFF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH VWHRVEGTLSIDTIVTPRRELFYWAAILCTFALGTAAGDLATEALGLGFTLGALCFGGLI HHHHHCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVFAAWRLGANAVLAFWIAYILTRPFGASLGDLLTQARTYGGLGFGAAWTSLLFLTVIV HHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LLVAVAQFGSGPRTRAGTAE HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQSLPAHRPPHWLNKVPDVALSFWIIKIMSTTVGETGADFLAVNAGLGQTVTRVAMASLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHH AIALWLQLRTRRYVPWIYWLTVVLVSIVGTQITDLLTDGLNVSLYASTAAFAVGLAAIFF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH VWHRVEGTLSIDTIVTPRRELFYWAAILCTFALGTAAGDLATEALGLGFTLGALCFGGLI HHHHHCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVFAAWRLGANAVLAFWIAYILTRPFGASLGDLLTQARTYGGLGFGAAWTSLLFLTVIV HHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LLVAVAQFGSGPRTRAGTAE HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA