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The map label for this gene is xerC [H]

Identifier: 78066452

GI number: 78066452

Start: 2009443

End: 2011209

Strand: Reverse

Name: xerC [H]

Synonym: Bcep18194_A4983

Alternate gene names: 78066452

Gene position: 2011209-2009443 (Counterclockwise)

Preceding gene: 78066453

Following gene: 78066449

Centisome position: 54.44

GC content: 70.18

Gene sequence:

>1767_bases
ATGGGTACTGCATCGACCTCCTCCGCAGGGTCGGACGACGGAAATCTCCCAGCGACCGCCCTGCCCAATCTCGCCTCGTT
GGCCGCCCTGCGCGCCTGGCACGCCGGGCTCACGGCCCGCGCGGCGGTCGAGCGCTATCTGCCGCACCGCAGGGCCGACG
GCCAGTCGTCACGCGGGCTCCTGGGGCAGATCCGCCGCCAACTCGTCGCGTGCGCGATCGCCCGCCAGCGCGACGACTTG
ATCCCGTTGTTCACCCACCCAGCCGCCGACCGTACCCGTCATGCGGCGCAGGTCATCACCGCGCTCGACGTCCTGCGGAC
TGCCCCCATCCCGGTGCCACAGCCGACCGACCCGGTGGCCCGCTGGCTGCCGCCGCGCATCGTACGCGCACTCGGCGTCG
CCGGCATCGACTCGTTCGGCGACCTGCTGGTGCGGAGGGTCCACCGCCCGGGCTGGTGGCGTTCGATTCCGGGGCTGGGG
GGCCAGGGTGCACACCGCGTCGAAGCCTTCCTCTCCCAACACCCGGACCTGAGCCGGCGCGCCGCCACGCTGGTTCCTTA
CGAGGCAGCGACCGCTCAGTTGGCCCCGCGATGGTCCCTGGATGCGCTGCCCGCCGACCTCGACGGTTCGCGGGGCCGCT
TCCGGGCCCCGCACGACACCTGCGGCCTCGCCGCCGCCAACGACCACCAGGCGGTCGAGGCATGGCTGGCACTCCACGAG
GGCACCCATACGGTGCGAGCCTACCGGCGCGAGGCCGAACGGCTGTTGTTGTGGGCCATTGTCGAGCGCCGCCAGCCCCT
CTCGTCGCTCACCACCGACGACGCGATCGCCTATCGGGCTTTCCTGCGCCACCCGACGCCCGCCGCCCGCTGGATCGGTC
CACCGCGCCCGCGCACGACGCCCGCGTGGCGTCCGTTCACGGGACACCTGACGGCGCGGTCAACCGCGTATGCGCTGGCC
GTCCTGCGCGCCCTCTTCGGGTGGCTCGTTGACCAGCATTACGTCGTGCTCAATCCGTTTGCAGGCGTGACAGTGCGTGG
CGGCGCAGCCCGTGCACCGTTTGATACCGGGCGGGCGTTGAATGGTCGAGAGTGGAAGATCGTGCGGGCTGCAGCCGACC
AGCTCGAGCGGACCGGCTGGACCGCACCGGCCGCAGAGCGGCTGCGCTTTGTACTGGATTTTGGCTATGCGACGGGCCTG
CGGGCACAGGAGCTAGTGGCGGCGACGCTGGGCGACATCACGGCGGACGCCCGCGGCGCGTTATGGCTGCAGGTAACAGG
AAAAGGGGCGAAATCGGGGCGCGTGGCCCTGCCGCCCCTCGCGCGAGACGCGCTGCGGCGCGCACTGAAGGCGCGGGGTC
TGCCGGTCATGCGCACTCGCTGGCATCCGGCGACACCGTTGGTCACCGCACTCAATTCAGAGCGTCGCGGGAAACGCCAC
GCCGGCATCAGTGCAGCGCGGTTGCGGCAGGTGTTAGGTGAGTGTTTTCGGGACACGGCCGAGCGCGTGAGCACCCGCAA
TCCCCCGCTTGCCGAGAAGCTACTGCATGCCAGTCCCCACTGGCTACGTCATACACATGCCACCCATGCACTAGACGCCG
GCGTGGAGCTGGTTATCGTGCGAGACAACCTGCGTCACGCCTCGGTGGCGACCACGTCGACCTATCTCCATGGGGAAGAG
GCTAAGCGCGCGCGTCAGGTGGGTGCAGCCTTCCAGCGCCAGCCCCGCCGATCACAACATCGAGACACGTCCCGTGGAAC
CCGATAA

Upstream 100 bases:

>100_bases
TGCTGTCGTGAAATGTCACCTCACGACCGGATGTGCAAATAGGTAATTTGCGATAAATAGTCTTATCGCGAGTACTTTCC
CAGCGACCTAAACTGGTTGC

Downstream 100 bases:

>100_bases
CTGGGCAAAACGTCTGAGACAAAAGAGACGGCACGATTGGATGAAATACAGGCCAACATGCAACGGCTTCGATCGGGTCG
TTCAACCAATATAGGCGTAT

Product: Phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MGTASTSSAGSDDGNLPATALPNLASLAALRAWHAGLTARAAVERYLPHRRADGQSSRGLLGQIRRQLVACAIARQRDDL
IPLFTHPAADRTRHAAQVITALDVLRTAPIPVPQPTDPVARWLPPRIVRALGVAGIDSFGDLLVRRVHRPGWWRSIPGLG
GQGAHRVEAFLSQHPDLSRRAATLVPYEAATAQLAPRWSLDALPADLDGSRGRFRAPHDTCGLAAANDHQAVEAWLALHE
GTHTVRAYRREAERLLLWAIVERRQPLSSLTTDDAIAYRAFLRHPTPAARWIGPPRPRTTPAWRPFTGHLTARSTAYALA
VLRALFGWLVDQHYVVLNPFAGVTVRGGAARAPFDTGRALNGREWKIVRAAADQLERTGWTAPAAERLRFVLDFGYATGL
RAQELVAATLGDITADARGALWLQVTGKGAKSGRVALPPLARDALRRALKARGLPVMRTRWHPATPLVTALNSERRGKRH
AGISAARLRQVLGECFRDTAERVSTRNPPLAEKLLHASPHWLRHTHATHALDAGVELVIVRDNLRHASVATTSTYLHGEE
AKRARQVGAAFQRQPRRSQHRDTSRGTR

Sequences:

>Translated_588_residues
MGTASTSSAGSDDGNLPATALPNLASLAALRAWHAGLTARAAVERYLPHRRADGQSSRGLLGQIRRQLVACAIARQRDDL
IPLFTHPAADRTRHAAQVITALDVLRTAPIPVPQPTDPVARWLPPRIVRALGVAGIDSFGDLLVRRVHRPGWWRSIPGLG
GQGAHRVEAFLSQHPDLSRRAATLVPYEAATAQLAPRWSLDALPADLDGSRGRFRAPHDTCGLAAANDHQAVEAWLALHE
GTHTVRAYRREAERLLLWAIVERRQPLSSLTTDDAIAYRAFLRHPTPAARWIGPPRPRTTPAWRPFTGHLTARSTAYALA
VLRALFGWLVDQHYVVLNPFAGVTVRGGAARAPFDTGRALNGREWKIVRAAADQLERTGWTAPAAERLRFVLDFGYATGL
RAQELVAATLGDITADARGALWLQVTGKGAKSGRVALPPLARDALRRALKARGLPVMRTRWHPATPLVTALNSERRGKRH
AGISAARLRQVLGECFRDTAERVSTRNPPLAEKLLHASPHWLRHTHATHALDAGVELVIVRDNLRHASVATTSTYLHGEE
AKRARQVGAAFQRQPRRSQHRDTSRGTR
>Mature_587_residues
GTASTSSAGSDDGNLPATALPNLASLAALRAWHAGLTARAAVERYLPHRRADGQSSRGLLGQIRRQLVACAIARQRDDLI
PLFTHPAADRTRHAAQVITALDVLRTAPIPVPQPTDPVARWLPPRIVRALGVAGIDSFGDLLVRRVHRPGWWRSIPGLGG
QGAHRVEAFLSQHPDLSRRAATLVPYEAATAQLAPRWSLDALPADLDGSRGRFRAPHDTCGLAAANDHQAVEAWLALHEG
THTVRAYRREAERLLLWAIVERRQPLSSLTTDDAIAYRAFLRHPTPAARWIGPPRPRTTPAWRPFTGHLTARSTAYALAV
LRALFGWLVDQHYVVLNPFAGVTVRGGAARAPFDTGRALNGREWKIVRAAADQLERTGWTAPAAERLRFVLDFGYATGLR
AQELVAATLGDITADARGALWLQVTGKGAKSGRVALPPLARDALRRALKARGLPVMRTRWHPATPLVTALNSERRGKRHA
GISAARLRQVLGECFRDTAERVSTRNPPLAEKLLHASPHWLRHTHATHALDAGVELVIVRDNLRHASVATTSTYLHGEEA
KRARQVGAAFQRQPRRSQHRDTSRGTR

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 64391; Mature: 64260

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTASTSSAGSDDGNLPATALPNLASLAALRAWHAGLTARAAVERYLPHRRADGQSSRGL
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCH
LGQIRRQLVACAIARQRDDLIPLFTHPAADRTRHAAQVITALDVLRTAPIPVPQPTDPVA
HHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
RWLPPRIVRALGVAGIDSFGDLLVRRVHRPGWWRSIPGLGGQGAHRVEAFLSQHPDLSRR
HHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
AATLVPYEAATAQLAPRWSLDALPADLDGSRGRFRAPHDTCGLAAANDHQAVEAWLALHE
HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GTHTVRAYRREAERLLLWAIVERRQPLSSLTTDDAIAYRAFLRHPTPAARWIGPPRPRTT
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCC
PAWRPFTGHLTARSTAYALAVLRALFGWLVDQHYVVLNPFAGVTVRGGAARAPFDTGRAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCCC
NGREWKIVRAAADQLERTGWTAPAAERLRFVLDFGYATGLRAQELVAATLGDITADARGA
CCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCE
LWLQVTGKGAKSGRVALPPLARDALRRALKARGLPVMRTRWHPATPLVTALNSERRGKRH
EEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCHHCCHHH
AGISAARLRQVLGECFRDTAERVSTRNPPLAEKLLHASPHWLRHTHATHALDAGVELVIV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
RDNLRHASVATTSTYLHGEEAKRARQVGAAFQRQPRRSQHRDTSRGTR
ECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure 
GTASTSSAGSDDGNLPATALPNLASLAALRAWHAGLTARAAVERYLPHRRADGQSSRGL
CCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCH
LGQIRRQLVACAIARQRDDLIPLFTHPAADRTRHAAQVITALDVLRTAPIPVPQPTDPVA
HHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
RWLPPRIVRALGVAGIDSFGDLLVRRVHRPGWWRSIPGLGGQGAHRVEAFLSQHPDLSRR
HHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
AATLVPYEAATAQLAPRWSLDALPADLDGSRGRFRAPHDTCGLAAANDHQAVEAWLALHE
HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GTHTVRAYRREAERLLLWAIVERRQPLSSLTTDDAIAYRAFLRHPTPAARWIGPPRPRTT
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCC
PAWRPFTGHLTARSTAYALAVLRALFGWLVDQHYVVLNPFAGVTVRGGAARAPFDTGRAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCCCC
NGREWKIVRAAADQLERTGWTAPAAERLRFVLDFGYATGLRAQELVAATLGDITADARGA
CCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCE
LWLQVTGKGAKSGRVALPPLARDALRRALKARGLPVMRTRWHPATPLVTALNSERRGKRH
EEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCHHCCHHH
AGISAARLRQVLGECFRDTAERVSTRNPPLAEKLLHASPHWLRHTHATHALDAGVELVIV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
RDNLRHASVATTSTYLHGEEAKRARQVGAAFQRQPRRSQHRDTSRGTR
ECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA