Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78066445

Identifier: 78066445

GI number: 78066445

Start: 2004236

End: 2005831

Strand: Direct

Name: 78066445

Synonym: Bcep18194_A4976

Alternate gene names: NA

Gene position: 2004236-2005831 (Clockwise)

Preceding gene: 78066444

Following gene: 78066448

Centisome position: 54.25

GC content: 62.66

Gene sequence:

>1596_bases
ATGCCGAATCTCGACGATCTGCCCGACGATGTCGCTGCATTGAAGGCCATGCTGGCTGAGGCTCGCGCGTCGGCAATCGA
AAGAGAACTCGAAATCGAGCAACTGCGCCGCGAGATTGCCGAGAGCGATCTTGAGATTGCACGGCTGAAACTCCTGATCG
ACAAGCTCAAGCGAATGCAGTTCGGCCGCAAGTCGGAGCAGCTCGCCCGAGAGATCGAGAGGCTTGAATTGCGGCTCGAG
GATCTGAGCGCCGGGAGCAGCGTCGCCGACGTGCAGCATGCGAAGGTCCGGCGAGAAAAGCCAGCGACAGGTGGCGAGTC
GTCGGCCCGGGAGCCGCTGCCGCCACATCTGCCGCGTGAAGACCGCGTGCTCAAACCGGATTCGATCTGCCCCAAGTGCG
ATGGCACCATGCAGAGCCTCGGCGAGGACGTCTCCGAACAGCTCGCCCGCGTCGCGGCGATGTTCAAGGTGATTCGCACG
ATCCGGCACAAGATGGTCTGTCCCAGCTGTGGCCACATCGAGCAGCCGTCGATGCCGGGGTTGCCGATCGAGCGTAGCAT
CGCCCATCCGAGTCTGCTTGCCGACATCCTGGTATCGAAGTACGCAGATCATGCGCCGCTGTACCGCCAGTCGGAGATCG
CCGCGCGCGACGGTGTGACGCTTGATCGCGCCAGCATGGGCCGCTGGGTCGGGCAATGCGAGGCGCTCTGCCGCCCGCTG
ACCGACGCACTGCGCCGGTACACGATGGCGGGCACGAAGCTGCACGCGGACGACACGCCGATCCCCGTGCTTGCGCCGGG
CAACAAGAAAACGAAGACCGGACGACTCTGGGTGTACGTGCGCGACGACAGCCGTTCGGGCTCGACGGAGCCGGCCGCGG
TGTGGTTCGCGTACTCGCCCGATCGCAAAGGCATCCATCCCCAGACCCATCTCGCTGGATTCGAAGGCATCCTGCAAGCC
GATGCATATGGCGGCTTCGACGAGCTGTACGTGAACGGCAAAATCTGCGAGGCTGCGTGTTGGGACCACGCGCGGAGAAA
ATACTACGAGGTCCACGCTAGCACGCCGACGGACGAAACCAAGAGCTTGCTCGAAATGATCGGCGAGCTCTACAGCATCG
AAGCCGACATCCGTGGCAAGCCGCCCGATGAACGAAAGCGCGTGCGGCATGAGAAAAGCAAGCCACTGCTGGAGGCCTTC
GAAGCGAGGATTCGGGGCAAGCTCGCAACGCTGTCGCGCAAGTCGGAGCTGGCCGGCGCGATCCAGTACTCGTTGAATCA
CTGGAATGCTCTGACGTTGTTCTGCGAGGCCGGGCAAGCCGAGATCAGCAACGCGCTGGCCGAGAACGCTCTGCGCTGCG
TGAGCCTTGGGAGGAAAAACTTCCTGTTTGCCGGCTCCGACAGCGGAGGCGAGCGGGCCGCCGCAATGTACAGTCTGCTT
GGGACATGCAAGCTCAGCGGTATCAACCCGCGCGCCTATCTGGAATACGTCCTGACCTACATTGCTGATCACGTCGCCAA
TCGCGTTGACGAACTGTTGCCCTGGAACGTGGCTGACAAACTGAGGCTAGCCACTCCGCCCAAGGCGAACATCTGA

Upstream 100 bases:

>100_bases
GCTTCTCGAAGGCATCGATTGGCGACAGCCCCGCCGTACGGCACCTCTGTCGATGCTGTAGGTATTGTAAACCGCTCGGG
AGGCTCGTAAACTCCGGCAC

Downstream 100 bases:

>100_bases
TGCATAAGTCAAGACCTGAGCTCCCCGTCAGCGTCAGATCAGGTCTGAAATTACTTCGCCGTCACTTCATCAAGGGTCGT
GATCGACCCTTCAGAGACAT

Product: transposase IS66

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MPNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQFGRKSEQLAREIERLELRLE
DLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPREDRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRT
IRHKMVCPSCGHIEQPSMPGLPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL
TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSPDRKGIHPQTHLAGFEGILQA
DAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDETKSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAF
EARIRGKLATLSRKSELAGAIQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL
GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI

Sequences:

>Translated_531_residues
MPNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQFGRKSEQLAREIERLELRLE
DLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPREDRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRT
IRHKMVCPSCGHIEQPSMPGLPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL
TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSPDRKGIHPQTHLAGFEGILQA
DAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDETKSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAF
EARIRGKLATLSRKSELAGAIQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL
GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI
>Mature_530_residues
PNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQFGRKSEQLAREIERLELRLED
LSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPREDRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRTI
RHKMVCPSCGHIEQPSMPGLPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPLT
DALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSPDRKGIHPQTHLAGFEGILQAD
AYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDETKSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAFE
ARIRGKLATLSRKSELAGAIQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLLG
TCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 58989; Mature: 58858

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGRKSEQLAREIERLELRLEDLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPRE
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRTIRHKMVCPSCGHIEQPSMPG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL
CCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHH
TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSP
HHHHHHHHHCCCEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECC
DRKGIHPQTHLAGFEGILQADAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDET
CCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHHEEEEECCCCCHHH
KSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAFEARIRGKLATLSRKSELAGA
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH
GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure 
PNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGRKSEQLAREIERLELRLEDLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPRE
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRTIRHKMVCPSCGHIEQPSMPG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL
CCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHH
TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSP
HHHHHHHHHCCCEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECC
DRKGIHPQTHLAGFEGILQADAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDET
CCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHHEEEEECCCCCHHH
KSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAFEARIRGKLATLSRKSELAGA
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH
GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]