| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066445
Identifier: 78066445
GI number: 78066445
Start: 2004236
End: 2005831
Strand: Direct
Name: 78066445
Synonym: Bcep18194_A4976
Alternate gene names: NA
Gene position: 2004236-2005831 (Clockwise)
Preceding gene: 78066444
Following gene: 78066448
Centisome position: 54.25
GC content: 62.66
Gene sequence:
>1596_bases ATGCCGAATCTCGACGATCTGCCCGACGATGTCGCTGCATTGAAGGCCATGCTGGCTGAGGCTCGCGCGTCGGCAATCGA AAGAGAACTCGAAATCGAGCAACTGCGCCGCGAGATTGCCGAGAGCGATCTTGAGATTGCACGGCTGAAACTCCTGATCG ACAAGCTCAAGCGAATGCAGTTCGGCCGCAAGTCGGAGCAGCTCGCCCGAGAGATCGAGAGGCTTGAATTGCGGCTCGAG GATCTGAGCGCCGGGAGCAGCGTCGCCGACGTGCAGCATGCGAAGGTCCGGCGAGAAAAGCCAGCGACAGGTGGCGAGTC GTCGGCCCGGGAGCCGCTGCCGCCACATCTGCCGCGTGAAGACCGCGTGCTCAAACCGGATTCGATCTGCCCCAAGTGCG ATGGCACCATGCAGAGCCTCGGCGAGGACGTCTCCGAACAGCTCGCCCGCGTCGCGGCGATGTTCAAGGTGATTCGCACG ATCCGGCACAAGATGGTCTGTCCCAGCTGTGGCCACATCGAGCAGCCGTCGATGCCGGGGTTGCCGATCGAGCGTAGCAT CGCCCATCCGAGTCTGCTTGCCGACATCCTGGTATCGAAGTACGCAGATCATGCGCCGCTGTACCGCCAGTCGGAGATCG CCGCGCGCGACGGTGTGACGCTTGATCGCGCCAGCATGGGCCGCTGGGTCGGGCAATGCGAGGCGCTCTGCCGCCCGCTG ACCGACGCACTGCGCCGGTACACGATGGCGGGCACGAAGCTGCACGCGGACGACACGCCGATCCCCGTGCTTGCGCCGGG CAACAAGAAAACGAAGACCGGACGACTCTGGGTGTACGTGCGCGACGACAGCCGTTCGGGCTCGACGGAGCCGGCCGCGG TGTGGTTCGCGTACTCGCCCGATCGCAAAGGCATCCATCCCCAGACCCATCTCGCTGGATTCGAAGGCATCCTGCAAGCC GATGCATATGGCGGCTTCGACGAGCTGTACGTGAACGGCAAAATCTGCGAGGCTGCGTGTTGGGACCACGCGCGGAGAAA ATACTACGAGGTCCACGCTAGCACGCCGACGGACGAAACCAAGAGCTTGCTCGAAATGATCGGCGAGCTCTACAGCATCG AAGCCGACATCCGTGGCAAGCCGCCCGATGAACGAAAGCGCGTGCGGCATGAGAAAAGCAAGCCACTGCTGGAGGCCTTC GAAGCGAGGATTCGGGGCAAGCTCGCAACGCTGTCGCGCAAGTCGGAGCTGGCCGGCGCGATCCAGTACTCGTTGAATCA CTGGAATGCTCTGACGTTGTTCTGCGAGGCCGGGCAAGCCGAGATCAGCAACGCGCTGGCCGAGAACGCTCTGCGCTGCG TGAGCCTTGGGAGGAAAAACTTCCTGTTTGCCGGCTCCGACAGCGGAGGCGAGCGGGCCGCCGCAATGTACAGTCTGCTT GGGACATGCAAGCTCAGCGGTATCAACCCGCGCGCCTATCTGGAATACGTCCTGACCTACATTGCTGATCACGTCGCCAA TCGCGTTGACGAACTGTTGCCCTGGAACGTGGCTGACAAACTGAGGCTAGCCACTCCGCCCAAGGCGAACATCTGA
Upstream 100 bases:
>100_bases GCTTCTCGAAGGCATCGATTGGCGACAGCCCCGCCGTACGGCACCTCTGTCGATGCTGTAGGTATTGTAAACCGCTCGGG AGGCTCGTAAACTCCGGCAC
Downstream 100 bases:
>100_bases TGCATAAGTCAAGACCTGAGCTCCCCGTCAGCGTCAGATCAGGTCTGAAATTACTTCGCCGTCACTTCATCAAGGGTCGT GATCGACCCTTCAGAGACAT
Product: transposase IS66
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MPNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQFGRKSEQLAREIERLELRLE DLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPREDRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRT IRHKMVCPSCGHIEQPSMPGLPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSPDRKGIHPQTHLAGFEGILQA DAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDETKSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAF EARIRGKLATLSRKSELAGAIQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI
Sequences:
>Translated_531_residues MPNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQFGRKSEQLAREIERLELRLE DLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPREDRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRT IRHKMVCPSCGHIEQPSMPGLPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSPDRKGIHPQTHLAGFEGILQA DAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDETKSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAF EARIRGKLATLSRKSELAGAIQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI >Mature_530_residues PNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQFGRKSEQLAREIERLELRLED LSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPREDRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRTI RHKMVCPSCGHIEQPSMPGLPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPLT DALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSPDRKGIHPQTHLAGFEGILQAD AYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDETKSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAFE ARIRGKLATLSRKSELAGAIQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLLG TCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 58989; Mature: 58858
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGRKSEQLAREIERLELRLEDLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPRE CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRTIRHKMVCPSCGHIEQPSMPG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL CCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHH TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSP HHHHHHHHHCCCEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECC DRKGIHPQTHLAGFEGILQADAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDET CCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHHEEEEECCCCCHHH KSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAFEARIRGKLATLSRKSELAGA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC >Mature Secondary Structure PNLDDLPDDVAALKAMLAEARASAIERELEIEQLRREIAESDLEIARLKLLIDKLKRMQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGRKSEQLAREIERLELRLEDLSAGSSVADVQHAKVRREKPATGGESSAREPLPPHLPRE CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DRVLKPDSICPKCDGTMQSLGEDVSEQLARVAAMFKVIRTIRHKMVCPSCGHIEQPSMPG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LPIERSIAHPSLLADILVSKYADHAPLYRQSEIAARDGVTLDRASMGRWVGQCEALCRPL CCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHH TDALRRYTMAGTKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDSRSGSTEPAAVWFAYSP HHHHHHHHHCCCEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECC DRKGIHPQTHLAGFEGILQADAYGGFDELYVNGKICEAACWDHARRKYYEVHASTPTDET CCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHHEEEEECCCCCHHH KSLLEMIGELYSIEADIRGKPPDERKRVRHEKSKPLLEAFEARIRGKLATLSRKSELAGA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQYSLNHWNALTLFCEAGQAEISNALAENALRCVSLGRKNFLFAGSDSGGERAAAMYSLL HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH GTCKLSGINPRAYLEYVLTYIADHVANRVDELLPWNVADKLRLATPPKANI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]