| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is acrR [C]
Identifier: 78066367
GI number: 78066367
Start: 1915352
End: 1916047
Strand: Direct
Name: acrR [C]
Synonym: Bcep18194_A4897
Alternate gene names: 78066367
Gene position: 1915352-1916047 (Clockwise)
Preceding gene: 78066366
Following gene: 78066368
Centisome position: 51.85
GC content: 63.65
Gene sequence:
>696_bases GTGGCAAAGGTCAATGCCGACGCGCAAAAAGAACAGATCCTGAACGCGGCGGCGAAGCTCTTCATCGAGAAGGGGTTCGG CGGCGCGTCGATGCAGGAGATCGCGGAATCGCTCGGCGTCACGCGTACCGCGGTCTACTACTACTTCAAGAACAAGGATG AGATCCTGACCGCGCTGGTCGAGGAAGTCACGCTGCGCGCGCGGCGTGAGTCGAGTCGCGTGGCGGCGGAAGCGGACGCC GATCCGAAAGCGCGGCTGCGTGCGCTGGTGCACCAGCATGCAATGCTGATCCTGAAGCATCACAACGAATTCCGCGTGAT CGACCGTACCGAACGGCAACTGCCCGAACGCGCGTACCGCGCGAACGAAGAGGCCAAGCGCGCGGTGCTGGACAACTTCA CGGCAGCCATCGAGGCCGGTGTGCAGACTGGCGTGTTCCGTGTGGTCGATGCGAAGGTGGCGGCGTTCACGATGATCGGC ATGTGCAGCTGGCCGGCATTCTGGTACAAGCCGGACGGCGCGAAGAGCGCGGAGGAAATCGCGGACGAGATCGCCGAACT CGCGGTGCACTCGGTCATGCGGCCCGCCAAACGTCAGCTCAAGCGGGCCGGCGACGTGTCGGAAGCGCTGGCGCTGCTGC GCGAGGATCTCGATCATCTGGAACTGATTGTCGAAAAGGCGCCGAAAGCAGGCTAG
Upstream 100 bases:
>100_bases GGATCACAGTCGGCGTGTTCGCGAGAGTTTCAGCGCTACAATCGCGGACACGACAACGGATGGCGCCGCTCCATGCGCCA TCCCCGACAGGAGTGCACTT
Downstream 100 bases:
>100_bases GAAAATTTTTTGCACTGAATTTGACATCAACGTCAAAAAACATATACTTGTGTCAAATCAAGGAGACGGCTCGATGAACG ATCTGACTGAAGGGTTCGCC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR-Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory; Transcription Regulator Protein; Transcription Regulator Transcription Regulator Protein; TetR Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Repressor; Tetr Family Transcriptional Regulator; TetR-Family Trasncriptional Regulator
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAKVNADAQKEQILNAAAKLFIEKGFGGASMQEIAESLGVTRTAVYYYFKNKDEILTALVEEVTLRARRESSRVAAEADA DPKARLRALVHQHAMLILKHHNEFRVIDRTERQLPERAYRANEEAKRAVLDNFTAAIEAGVQTGVFRVVDAKVAAFTMIG MCSWPAFWYKPDGAKSAEEIADEIAELAVHSVMRPAKRQLKRAGDVSEALALLREDLDHLELIVEKAPKAG
Sequences:
>Translated_231_residues MAKVNADAQKEQILNAAAKLFIEKGFGGASMQEIAESLGVTRTAVYYYFKNKDEILTALVEEVTLRARRESSRVAAEADA DPKARLRALVHQHAMLILKHHNEFRVIDRTERQLPERAYRANEEAKRAVLDNFTAAIEAGVQTGVFRVVDAKVAAFTMIG MCSWPAFWYKPDGAKSAEEIADEIAELAVHSVMRPAKRQLKRAGDVSEALALLREDLDHLELIVEKAPKAG >Mature_230_residues AKVNADAQKEQILNAAAKLFIEKGFGGASMQEIAESLGVTRTAVYYYFKNKDEILTALVEEVTLRARRESSRVAAEADAD PKARLRALVHQHAMLILKHHNEFRVIDRTERQLPERAYRANEEAKRAVLDNFTAAIEAGVQTGVFRVVDAKVAAFTMIGM CSWPAFWYKPDGAKSAEEIADEIAELAVHSVMRPAKRQLKRAGDVSEALALLREDLDHLELIVEKAPKAG
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25686; Mature: 25555
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVNADAQKEQILNAAAKLFIEKGFGGASMQEIAESLGVTRTAVYYYFKNKDEILTALV CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHEEEECCHHHHHHHHH EEVTLRARRESSRVAAEADADPKARLRALVHQHAMLILKHHNEFRVIDRTERQLPERAYR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHH ANEEAKRAVLDNFTAAIEAGVQTGVFRVVDAKVAAFTMIGMCSWPAFWYKPDGAKSAEEI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHH ADEIAELAVHSVMRPAKRQLKRAGDVSEALALLREDLDHLELIVEKAPKAG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKVNADAQKEQILNAAAKLFIEKGFGGASMQEIAESLGVTRTAVYYYFKNKDEILTALV CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHEEEECCHHHHHHHHH EEVTLRARRESSRVAAEADADPKARLRALVHQHAMLILKHHNEFRVIDRTERQLPERAYR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHH ANEEAKRAVLDNFTAAIEAGVQTGVFRVVDAKVAAFTMIGMCSWPAFWYKPDGAKSAEEI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHH ADEIAELAVHSVMRPAKRQLKRAGDVSEALALLREDLDHLELIVEKAPKAG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA