| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066342
Identifier: 78066342
GI number: 78066342
Start: 1891296
End: 1891667
Strand: Direct
Name: 78066342
Synonym: Bcep18194_A4872
Alternate gene names: NA
Gene position: 1891296-1891667 (Clockwise)
Preceding gene: 78066339
Following gene: 78066343
Centisome position: 51.2
GC content: 63.44
Gene sequence:
>372_bases ATGTCTGCAACCTGGTTCAAAGGGTCCTGCCATTGCGGGGCCGTCAAATTCGAAGTCCGAACTGCCGTGACGCCGGCGGT GCGCTGCAACTGCAGCCTGTGCCGCCGGCGCGGCGCATTGATGAGCCCGATGTTCGCCGCCAGCGAACTGAAGATCGTCG AAGGCGAGGGCGCGCTGACGTGCTACCAATTCAACACGCGCACGGCCCGTCACTATTTTTGCAGCCATTGCGGCATCTAT CCGTTCCATCAGACGCGCAAAGACCCGGCCTGCTGGCGCGTCAATCTCGGCTGCCTCGATGGCGTCGATCCGTATGCGCT CGATGCAACGGTCGCCGACGGCGCGAGCCTCTCGGTCGTGGAGGACGCATGA
Upstream 100 bases:
>100_bases TTGCAATGTTCTGTATCTGCACGAACCGCGGATACAACGCGATACAACGCACGTTCGGGCGTCCGCTATAAAGCAGGCAT GACCTCTTCTGGAGTGCACC
Downstream 100 bases:
>100_bases AACGCTGGCTGATGATCCTGCTGTTTGCCGCAGGCGGGCTCGCGACCGAAATAGCGCATCCAGTGCAATGCTCGCTGCTG TCGGTCAGCCGCGTGCAGAC
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Gfa-Like Protein; Plasmid PRiA4b ORF-3 Family Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Protein Gfa; Glutathione-Dependent Formaldehyde-Activating Family
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSATWFKGSCHCGAVKFEVRTAVTPAVRCNCSLCRRRGALMSPMFAASELKIVEGEGALTCYQFNTRTARHYFCSHCGIY PFHQTRKDPACWRVNLGCLDGVDPYALDATVADGASLSVVEDA
Sequences:
>Translated_123_residues MSATWFKGSCHCGAVKFEVRTAVTPAVRCNCSLCRRRGALMSPMFAASELKIVEGEGALTCYQFNTRTARHYFCSHCGIY PFHQTRKDPACWRVNLGCLDGVDPYALDATVADGASLSVVEDA >Mature_122_residues SATWFKGSCHCGAVKFEVRTAVTPAVRCNCSLCRRRGALMSPMFAASELKIVEGEGALTCYQFNTRTARHYFCSHCGIYP FHQTRKDPACWRVNLGCLDGVDPYALDATVADGASLSVVEDA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=94, Percent_Identity=39.3617021276596, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25149380, Length=117, Percent_Identity=35.8974358974359, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25149382, Length=90, Percent_Identity=41.1111111111111, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13446; Mature: 13315
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATWFKGSCHCGAVKFEVRTAVTPAVRCNCSLCRRRGALMSPMFAASELKIVEGEGALT CCCCCCCCCCCCCEEEEEEECCCCCCEECCHHHHHHCCCCCCCCCCCCEEEEEECCCCEE CYQFNTRTARHYFCSHCGIYPFHQTRKDPACWRVNLGCLDGVDPYALDATVADGASLSVV EEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEE EDA ECC >Mature Secondary Structure SATWFKGSCHCGAVKFEVRTAVTPAVRCNCSLCRRRGALMSPMFAASELKIVEGEGALT CCCCCCCCCCCCEEEEEEECCCCCCEECCHHHHHHCCCCCCCCCCCCEEEEEECCCCEE CYQFNTRTARHYFCSHCGIYPFHQTRKDPACWRVNLGCLDGVDPYALDATVADGASLSVV EEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEE EDA ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA