Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is ybgO [C]

Identifier: 78066244

GI number: 78066244

Start: 1774544

End: 1775569

Strand: Direct

Name: ybgO [C]

Synonym: Bcep18194_A4774

Alternate gene names: 78066244

Gene position: 1774544-1775569 (Clockwise)

Preceding gene: 78066243

Following gene: 78066245

Centisome position: 48.04

GC content: 63.74

Gene sequence:

>1026_bases
ATGAGCGGGGGCGCAAGACAACGCGTGTCGCCGCTCGCGTCGTGGCTGCGCTGGGTCGTGCTCGCGATGCTGATCGCGGC
GGTGCAGCCGGCATGGGCGCTGCGCTGCCTGAGCGACGGTGGCGCGGATTCGCTTACCGAGCCGATCGGCGGTGTCGCAT
CGTATCCGACGGACGCGCAGGACGGGTACGTGATCTGGGTATCGCCGCCGCGCACGACGACGGGGTACTGCTACAAGGAC
TACGGCGGGAGCGCACTGGACTTTTCCGAGAAGGTTTACTTCTACGCGAATCCCAGATCGCAGGATCCCGCCGCATGGGG
GCTGGAGATCGGCATTCGCTATGGTGGCCAGGACTATTTCGGCCTGGGTAGCGGGCCGAGCGCGCGCGTGGAAACCACCA
CCACCGTGGGTCCGTGCTCGCGCAGTGACTTTCAATGGGGGCGCTGCGAGAAGGTGCCGCTCAGCATCACGTATCAGGTG
GTGATACGCAAGAAGGGCCAATGGATGCAGCCGCCGAACGACATCTATGCGGTCTTCCAGTTCGACGGCAGAGGCGGCCT
CAACGCGGCCCGATCGAGTTTTCAGTACCGGCTGAGCGGGTTGTCGCGCCTGAAGCCGACACCGTGCCTGGTCGACGTGC
TGGTGACGCCCGAGCCCGGCATCGTCAATTTCGGCCAGGTGCAGGCGTCCGGCAATGGCTTCCTGCCGGCCGTGCCGCGC
CGACGGTTCTCGTTGTCGCTGACGAAGAAATGCAGCATCCCGATTCGCGTCGACGGTTATTTCGAGGCGACCAAGGGCAC
CGTGCAGAACGGTTTGCTGGTACCGGCGACGAACAGCAACTTCGGGATCGGCCTCGAGGATAGCCAGGGGAAGGCGATCG
AGTTCAACAAGCAGTTCACGCTCACGCAGTTTGCGGCCAACGTCGCGAATCAGACCGTGTTGCTCGATGCAGTGCTCAAG
TCGTTCGGACCACCGAAGATCGGGCCGTTCGATGCGTCCGCCACGATCCGGATTTTCCTGTATTGA

Upstream 100 bases:

>100_bases
CGATGCCGTCGACGCTGTTCGTCACGCATGTGGACGACTACGGCGGCCAGGTGGCGGTCGAGTATGCGTGCGAGGCCGGT
GCCTGCAAGAGCGTGAAGAA

Downstream 100 bases:

>100_bases
GCGTTGCGCGGTATGAGCGACGTGCATCGCAAAGAGACGTCGCCTGCACCGGAATTTCATTGACGAACCGACGGAGGAGA
AGGGGATGCATCTGAGACGC

Product: fimbrial protein

Products: NA

Alternate protein names: Fimbrial Adhesin

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSGGARQRVSPLASWLRWVVLAMLIAAVQPAWALRCLSDGGADSLTEPIGGVASYPTDAQDGYVIWVSPPRTTTGYCYKD
YGGSALDFSEKVYFYANPRSQDPAAWGLEIGIRYGGQDYFGLGSGPSARVETTTTVGPCSRSDFQWGRCEKVPLSITYQV
VIRKKGQWMQPPNDIYAVFQFDGRGGLNAARSSFQYRLSGLSRLKPTPCLVDVLVTPEPGIVNFGQVQASGNGFLPAVPR
RRFSLSLTKKCSIPIRVDGYFEATKGTVQNGLLVPATNSNFGIGLEDSQGKAIEFNKQFTLTQFAANVANQTVLLDAVLK
SFGPPKIGPFDASATIRIFLY

Sequences:

>Translated_341_residues
MSGGARQRVSPLASWLRWVVLAMLIAAVQPAWALRCLSDGGADSLTEPIGGVASYPTDAQDGYVIWVSPPRTTTGYCYKD
YGGSALDFSEKVYFYANPRSQDPAAWGLEIGIRYGGQDYFGLGSGPSARVETTTTVGPCSRSDFQWGRCEKVPLSITYQV
VIRKKGQWMQPPNDIYAVFQFDGRGGLNAARSSFQYRLSGLSRLKPTPCLVDVLVTPEPGIVNFGQVQASGNGFLPAVPR
RRFSLSLTKKCSIPIRVDGYFEATKGTVQNGLLVPATNSNFGIGLEDSQGKAIEFNKQFTLTQFAANVANQTVLLDAVLK
SFGPPKIGPFDASATIRIFLY
>Mature_340_residues
SGGARQRVSPLASWLRWVVLAMLIAAVQPAWALRCLSDGGADSLTEPIGGVASYPTDAQDGYVIWVSPPRTTTGYCYKDY
GGSALDFSEKVYFYANPRSQDPAAWGLEIGIRYGGQDYFGLGSGPSARVETTTTVGPCSRSDFQWGRCEKVPLSITYQVV
IRKKGQWMQPPNDIYAVFQFDGRGGLNAARSSFQYRLSGLSRLKPTPCLVDVLVTPEPGIVNFGQVQASGNGFLPAVPRR
RFSLSLTKKCSIPIRVDGYFEATKGTVQNGLLVPATNSNFGIGLEDSQGKAIEFNKQFTLTQFAANVANQTVLLDAVLKS
FGPPKIGPFDASATIRIFLY

Specific function: May Be Involved In A Fimbrial System Chaperoned By Ybgp And Exported By Ybgq. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36998; Mature: 36867

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGARQRVSPLASWLRWVVLAMLIAAVQPAWALRCLSDGGADSLTEPIGGVASYPTDAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHCCCCCCCCCCCCC
DGYVIWVSPPRTTTGYCYKDYGGSALDFSEKVYFYANPRSQDPAAWGLEIGIRYGGQDYF
CCEEEEECCCCCCCCEEEECCCCCEECCCCEEEEEECCCCCCCCEEEEEEEEEECCCEEE
GLGSGPSARVETTTTVGPCSRSDFQWGRCEKVPLSITYQVVIRKKGQWMQPPNDIYAVFQ
ECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE
FDGRGGLNAARSSFQYRLSGLSRLKPTPCLVDVLVTPEPGIVNFGQVQASGNGFLPAVPR
ECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCEEEECCCCCCCCCCC
RRFSLSLTKKCSIPIRVDGYFEATKGTVQNGLLVPATNSNFGIGLEDSQGKAIEFNKQFT
CEEEEEEEEECCCEEEECCEEECCCCHHHCCEEEEECCCCCCEEEECCCCCEEEECCCEE
LTQFAANVANQTVLLDAVLKSFGPPKIGPFDASATIRIFLY
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
SGGARQRVSPLASWLRWVVLAMLIAAVQPAWALRCLSDGGADSLTEPIGGVASYPTDAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHCCCCCCCCCCCCC
DGYVIWVSPPRTTTGYCYKDYGGSALDFSEKVYFYANPRSQDPAAWGLEIGIRYGGQDYF
CCEEEEECCCCCCCCEEEECCCCCEECCCCEEEEEECCCCCCCCEEEEEEEEEECCCEEE
GLGSGPSARVETTTTVGPCSRSDFQWGRCEKVPLSITYQVVIRKKGQWMQPPNDIYAVFQ
ECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE
FDGRGGLNAARSSFQYRLSGLSRLKPTPCLVDVLVTPEPGIVNFGQVQASGNGFLPAVPR
ECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCEEEECCCCCCCCCCC
RRFSLSLTKKCSIPIRVDGYFEATKGTVQNGLLVPATNSNFGIGLEDSQGKAIEFNKQFT
CEEEEEEEEECCCEEEECCEEECCCCHHHCCEEEEECCCCCCEEEECCCCCEEEECCCEE
LTQFAANVANQTVLLDAVLKSFGPPKIGPFDASATIRIFLY
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA