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The map label for this gene is yecS [H]

Identifier: 78066234

GI number: 78066234

Start: 1760753

End: 1761478

Strand: Direct

Name: yecS [H]

Synonym: Bcep18194_A4764

Alternate gene names: 78066234

Gene position: 1760753-1761478 (Clockwise)

Preceding gene: 78066233

Following gene: 78066237

Centisome position: 47.66

GC content: 68.46

Gene sequence:

>726_bases
ATGGATTTCTCGCTGCTGCTCGCCAATCTGCCTTACCTGCTCGTCGGCGCGTTCCCGGAAGGGCCGCTCGGCGGCGCCGC
GCTGTCGCTGTTGCTCGCGATCGCATCGGCCATTGCCTCGGCCGTGCTCGGCATCGCGCTCGGCGTTGCGATGGCGCTCG
CGCGCGGCCCCGTGCGCGTGCTGCTGCTCGCGTTCATCGGTTTCTTCCGTGCGATTCCGGTGCTGATGCTGATTTTCTGG
ACGTACTTCCTGATGCCCATGCTGCTGCACATGGACGTGCCGGGGCTCGCGACGGTCGTATGCGCGCTCGCGCTGATCGG
TGGCGCGTATCTCGCGCACGCGGTGCATGCGGGCATCGTCGCGGCCGGCGACGGGCAATGGCAGGCCGGGCTGTCGCTCG
GGCTCACGCGCTGGCAGACGGTGCGCTACGTGCTGCTGCCGCAGGCGATCCGGATCATGACGCCGTCGTTCGTCAACCAG
TGGGTCGCGCTCGTGAAGGACACGTCGCTTGCCTATATCGTCGGCGTGCCGGAGCTGTCGTTCGTCGCAACGCAGGTGAA
CAACCGGCTGATGGTGTATCCGGCGCCGATCTTCCTGTTCGTCGCGCTGATCTATCTGGTGCTGTGCACGTCGCTCGACG
GCGCGGCACGCTGGCTGCTGTCGCGGCGCCCGCGCGCGGAACGCGCCGCGCATGCGGCGGCCGAGTACACGGAACCCGCG
CGGTGA

Upstream 100 bases:

>100_bases
GCGTGGCAACCGTGCTGTACGTCGCAGCGGTGGCCGCGATCGAAGCGGGCGCGTATGCCGCCACGCAATGGCGCGACCGG
CTGGGAGCGGGGCGCTGACG

Downstream 100 bases:

>100_bases
CGGCATGCTGTTGCCGTTCTGAATTGCCGACAAGGCAGTGTCGATGAATGGGTGCAGCGGACAGCGCGCCAGGCAGGTCA
GGCCCGGCAGGCAAGGAGAG

Product: ABC polar amino acid transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MDFSLLLANLPYLLVGAFPEGPLGGAALSLLLAIASAIASAVLGIALGVAMALARGPVRVLLLAFIGFFRAIPVLMLIFW
TYFLMPMLLHMDVPGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQ
WVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLFVALIYLVLCTSLDGAARWLLSRRPRAERAAHAAAEYTEPA
R

Sequences:

>Translated_241_residues
MDFSLLLANLPYLLVGAFPEGPLGGAALSLLLAIASAIASAVLGIALGVAMALARGPVRVLLLAFIGFFRAIPVLMLIFW
TYFLMPMLLHMDVPGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQ
WVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLFVALIYLVLCTSLDGAARWLLSRRPRAERAAHAAAEYTEPA
R
>Mature_241_residues
MDFSLLLANLPYLLVGAFPEGPLGGAALSLLLAIASAIASAVLGIALGVAMALARGPVRVLLLAFIGFFRAIPVLMLIFW
TYFLMPMLLHMDVPGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQ
WVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLFVALIYLVLCTSLDGAARWLLSRRPRAERAAHAAAEYTEPA
R

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=230, Percent_Identity=33.9130434782609, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=29.7297297297297, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1787030, Length=197, Percent_Identity=30.9644670050761, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI87082239, Length=216, Percent_Identity=31.9444444444444, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI48994930, Length=87, Percent_Identity=39.0804597701149, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=24.6445497630332, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=29.9539170506912, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=26.1467889908257, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787087, Length=212, Percent_Identity=25.9433962264151, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786874, Length=170, Percent_Identity=27.0588235294118, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25797; Mature: 25797

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSLLLANLPYLLVGAFPEGPLGGAALSLLLAIASAIASAVLGIALGVAMALARGPVRV
CCHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LLLAFIGFFRAIPVLMLIFWTYFLMPMLLHMDVPGLATVVCALALIGGAYLAHAVHAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEE
AAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELS
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCHH
FVATQVNNRLMVYPAPIFLFVALIYLVLCTSLDGAARWLLSRRPRAERAAHAAAEYTEPA
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
R
C
>Mature Secondary Structure
MDFSLLLANLPYLLVGAFPEGPLGGAALSLLLAIASAIASAVLGIALGVAMALARGPVRV
CCHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LLLAFIGFFRAIPVLMLIFWTYFLMPMLLHMDVPGLATVVCALALIGGAYLAHAVHAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEE
AAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELS
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCHH
FVATQVNNRLMVYPAPIFLFVALIYLVLCTSLDGAARWLLSRRPRAERAAHAAAEYTEPA
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]