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The map label for this gene is yphH [C]

Identifier: 78066154

GI number: 78066154

Start: 1677225

End: 1678472

Strand: Reverse

Name: yphH [C]

Synonym: Bcep18194_A4684

Alternate gene names: 78066154

Gene position: 1678472-1677225 (Counterclockwise)

Preceding gene: 78066155

Following gene: 78066153

Centisome position: 45.44

GC content: 69.87

Gene sequence:

>1248_bases
ATGAGAAGCCCGCACTTCGGCCAGGGAAGCAATTCGGCCAACGTGCGCCGTTACAACGAGCGCCTGCTGCTGAAGACGCT
GCGCCGCGCAGGCAGCGCGTCGAAGGCAGACCTCGCCCGCCTGGCGAACATGACGGGAACGGCGGTCGGCAGCATCATCG
CGTCGCTCTCCGACGCGAAGCTGATCGAATTCGCGGGCCGCACCGAAGGCCAGCGCGGCCAGCCGGCTTCGCTGATCCGC
CTCGACCCTCGCGGCGCGTTCGGCATTGGCGTCCATCTCGACCGGATGCGCATCGAAACGGCACTCGTCAACTTCGCGGG
TGACGTACTCGGCCGCCGCTCGCACGACACACTGCTGCCGCCGCCCGCCGACGTGCTCGAGATCGTCCGCCACGACATCG
ACGCAATGCAGGCCCTGCTTCCCGACCACGAGCGCGCGCGCCTGACCGGCATCGGCGTCGCACAGCCATACAACCTCGGC
GCATGGATGCGCGAACTCGGGCTTGCACCCGACACATTCCGTGCGTGGGAAGACGTCGATTTCGCGGCCGACCTCGGTCG
CACGCTGTCGCTTCCCGTATTCGGCGAAAACGACGGCAACGCGGCCGCGATCGCCGAGCTGTTCTACGGATACGGCCGGC
AGTGCGACGATTTCGTCTACCTGTTCATCGGGCCGGCGATCGGCGGCGGCATCGCGATCGATGGCGACTGCCTGCGCGGC
GTCACCGGCAATGCGGGCGACATCGCCGTGATTCCCGTGCCGCCGAGCCGGCTGGCTTCCGCGCCGCCGCCGCGCGGCCC
GTGGGACATCCTGCTCGCGCGCGCGTCGCTGCACGCGCTGGTGCGTCACCTGCGCCATCACGGCGAGACGGTCGACAACC
GGGCCGATCTCGAAGCGTGCATCGCCCGCGGGCTGCCGGCCGTCGACGAATGGATCGACGATTGCGTCGACGCACTGGCG
CCGGCATTGCGTGCAGTGCTGTGCGTGGTCGACGCGCCGGTGGTCGTGATCGACGCCGATACCGACGCGGGACTGCTCGA
CGCGGTCACGACGCGCCTGCGCGCGGCGCTCGTGGCCACCGCCCCGGAAGCGCGCGGCACGCCCGTGCTCGTCCGTGGCA
CGTTCGGCGCCGATGCCGGTGCGATCGGTGCGGCCACGCTGCCGATGTTCTTCAACTTCTCCCCGCGGGCCGGCATCCTC
AAGGGCGCCCGCACCGACTCGCAGGAGGTCAACCATGTCGCGATCTGA

Upstream 100 bases:

>100_bases
GGGATTTCCCTAGGCTGACATGCCGTCGCTCACGCGGTTAAATAAATCAACGTGATTTATTTAATGCGCCATCGAACGGC
GCGACATGGAAGGAGACGCC

Downstream 100 bases:

>100_bases
GTCGCCCCGCCCGTTGCTCGAGATGCGCGGAATCAGCAAGACGTTCCCGGCCGTGCGTGCGCTCGACAACGTCAGCCTGA
CCGTCTATCCCGGCGAGATC

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIASLSDAKLIEFAGRTEGQRGQPASLIR
LDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLPPPADVLEIVRHDIDAMQALLPDHERARLTGIGVAQPYNLG
AWMRELGLAPDTFRAWEDVDFAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVDNRADLEACIARGLPAVDEWIDDCVDALA
PALRAVLCVVDAPVVVIDADTDAGLLDAVTTRLRAALVATAPEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGIL
KGARTDSQEVNHVAI

Sequences:

>Translated_415_residues
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIASLSDAKLIEFAGRTEGQRGQPASLIR
LDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLPPPADVLEIVRHDIDAMQALLPDHERARLTGIGVAQPYNLG
AWMRELGLAPDTFRAWEDVDFAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVDNRADLEACIARGLPAVDEWIDDCVDALA
PALRAVLCVVDAPVVVIDADTDAGLLDAVTTRLRAALVATAPEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGIL
KGARTDSQEVNHVAI
>Mature_415_residues
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIASLSDAKLIEFAGRTEGQRGQPASLIR
LDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLPPPADVLEIVRHDIDAMQALLPDHERARLTGIGVAQPYNLG
AWMRELGLAPDTFRAWEDVDFAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVDNRADLEACIARGLPAVDEWIDDCVDALA
PALRAVLCVVDAPVVVIDADTDAGLLDAVTTRLRAALVATAPEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGIL
KGARTDSQEVNHVAI

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787878, Length=248, Percent_Identity=22.9838709677419, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 43992; Mature: 43992

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIASLSDAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
LIEFAGRTEGQRGQPASLIRLDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLP
HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PPADVLEIVRHDIDAMQALLPDHERARLTGIGVAQPYNLGAWMRELGLAPDTFRAWEDVD
CHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHCCH
FAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
HHHHCCCEEECEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCHHHCC
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVDNRADLEAC
CCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IARGLPAVDEWIDDCVDALAPALRAVLCVVDAPVVVIDADTDAGLLDAVTTRLRAALVAT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
APEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGILKGARTDSQEVNHVAI
CCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCCCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIASLSDAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
LIEFAGRTEGQRGQPASLIRLDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLP
HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PPADVLEIVRHDIDAMQALLPDHERARLTGIGVAQPYNLGAWMRELGLAPDTFRAWEDVD
CHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHCCH
FAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
HHHHCCCEEECEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCHHHCC
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVDNRADLEAC
CCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IARGLPAVDEWIDDCVDALAPALRAVLCVVDAPVVVIDADTDAGLLDAVTTRLRAALVAT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
APEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGILKGARTDSQEVNHVAI
CCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCCCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]