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The map label for this gene is 78066127

Identifier: 78066127

GI number: 78066127

Start: 1647081

End: 1648757

Strand: Reverse

Name: 78066127

Synonym: Bcep18194_A4657

Alternate gene names: NA

Gene position: 1648757-1647081 (Counterclockwise)

Preceding gene: 78066141

Following gene: 78066126

Centisome position: 44.63

GC content: 72.33

Gene sequence:

>1677_bases
ATGGACATTAAGGTTATCCCTCATGGCGTGTTCCGGACGACTCTGATCGCGGCCACCGTTGCAGCCATGCTTTCCCTCTC
CGCGTGCGGTGGTTCCGGTTCCATCAGCCAGGGTCTCGGCGGCGGCTCGAGTTCGGGCGGCGGCGACACGATCTCCACGT
CGGGCACGAGCGGTACCTCGGGCACCAGCGGTACCTCCGGCACGAGCGGCACGTCGGGCACCAGCGGCACTTCGGGTACC
AGCGGTACGTCCGGCACCAGCGGAACCTCGGGTACGAGCGGCACCAGCGGTACGTCGGGCACGAGCGGTACTTCCGGCAC
CTCGGGTGTGTCGTCGAACCCGGTGGGAAATGTCCTCGCAAACAGCAGCAACATCATCACGGGTGTCGGCAGCACCGTCT
CGGGTCTGGGCTCCGTCATCGGCAGCCAGTCGCTGCCGGGCGTCAACCCGGCCACCACGAAAGCCGCAGGCGGCGTCGTG
CAAAGCGTCGGCGGCGCGGTGACGGCACTTGGCAACGGCCTCGGCAACGGTCTCGGCCAGCTCGGCGCGACGAAGGATCC
GCTCGGCACCACGCTCGCCAGCACGGGTAACGTGGTCAATCAACTCGGCGGCGCGGTCACGCAGACCGGCACCCTGGTCA
CGAGCCTCGGCAGCGGCCCGCTGTCGCCGCTCGCACCGGTCACGGGCGCCGTCGGCGGCCTCGTGTCGACCCTTGGCGGT
GCCGTCTCGAACGGCGGCAACACCCTCACCAACGCACTGTCGACCGGCCCGATCCAGCAAGTCACGCAGACGGTCAGCTC
GGCCATCACGCCGATCACGACGATGGTCGGCCAGACGACCCAGACGATCGGCACGGCGACCGGCCTCGGCGCGCCCGTCA
ACACGCTGCTCGGCACGGTCGGCAACGGCCTGAACCAGGCCGGCGCCCTGCTCGCGTCAACGGGCGGCAACCCCGTCACG
ACCGGCCTTGGCAACACGGTCTCGTCCACGGGCAACACCGTGAAGGCCGTCGGTGGCCTGCTCACGGGCGGCAGCGGCGG
CGTGACCAACCCGCTCGCCCCGCTCACGGGTCTCCTCACGACGGTCACGGGTACGCTCGGCGGCGCAACGGGTGGCGCCA
GCAGCCCGCTCGCTCCGGTTACCGGCCTCGTCTCGACGGTCACCGGTGCGCTTGGCGGTGCAGCGGGTGGCGGCAGCGGC
CCGCTCGCGCCGGTCACCGGCCTCGTCTCGACGGTCACGGGCGCACTCGGCGGTGCAGCAGGCGGCAGCGGCGGCCCGCT
CGCCCCGGTCACCGGCCTTGTCTCGACGGTCACGGGCGCACTCGGCGGTGCAGCAGGCGGCAGCGGCGGCCCGCTTGCCC
CGGTCACCGGCCTCGTCTCGACGGTCACGGGCGCGCTCGGCGGCGCAACGGGCGGCACGAGCAGCGGCCCGCTCGCGCCG
GTCACGGGTCTCCTCGGCGCGGTCACGGGCGCACTCGGCGGCGTGACGGGCGGCGCAGGCGGCAGCAGCCCGCTCGCCCC
GGTGACGAACGTCGTGTCCACGGTGACCAACGCGGTCGGCGCGCCGGCATTGACCGGCGGCACGGGTGCCGTCACGAACG
GTGGCTCGTCGTCGAATCCGCTCGCACCTGTCACGTCGCTGATCGGCGGCCTGCTCGGCGGCACGCACGGCAAGTAA

Upstream 100 bases:

>100_bases
GTCGAACCGTCGAGCATCGAAATGGCACGACAGTTGCAGAGTAGTCCTCGCACCACTCAACACAACGCAGTTCACAACAC
ATTTTTAATGCGAGGACAAA

Downstream 100 bases:

>100_bases
ACCAACATCCATCAATCGACAAGACAGCGAGGAGTCAATCATGTCCCAGCAACGTTCTCTCACGACCGCCGCCGTGCGCC
AATGGCGCGTGCCCCTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: Hemagglutinin-Related Transmembrane Protein; Triple Helix Repeat-Containing Collagen; Hemagglutinin Transmembrane Protein; Collagen Triple Helix Repeat

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGSSSGGGDTISTSGTSGTSGTSGTSGTSGTSGTSGTSGT
SGTSGTSGTSGTSGTSGTSGTSGTSGTSGVSSNPVGNVLANSSNIITGVGSTVSGLGSVIGSQSLPGVNPATTKAAGGVV
QSVGGAVTALGNGLGNGLGQLGATKDPLGTTLASTGNVVNQLGGAVTQTGTLVTSLGSGPLSPLAPVTGAVGGLVSTLGG
AVSNGGNTLTNALSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLASTGGNPVT
TGLGNTVSSTGNTVKAVGGLLTGGSGGVTNPLAPLTGLLTTVTGTLGGATGGASSPLAPVTGLVSTVTGALGGAAGGGSG
PLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGATGGTSSGPLAP
VTGLLGAVTGALGGVTGGAGGSSPLAPVTNVVSTVTNAVGAPALTGGTGAVTNGGSSSNPLAPVTSLIGGLLGGTHGK

Sequences:

>Translated_558_residues
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGSSSGGGDTISTSGTSGTSGTSGTSGTSGTSGTSGTSGT
SGTSGTSGTSGTSGTSGTSGTSGTSGTSGVSSNPVGNVLANSSNIITGVGSTVSGLGSVIGSQSLPGVNPATTKAAGGVV
QSVGGAVTALGNGLGNGLGQLGATKDPLGTTLASTGNVVNQLGGAVTQTGTLVTSLGSGPLSPLAPVTGAVGGLVSTLGG
AVSNGGNTLTNALSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLASTGGNPVT
TGLGNTVSSTGNTVKAVGGLLTGGSGGVTNPLAPLTGLLTTVTGTLGGATGGASSPLAPVTGLVSTVTGALGGAAGGGSG
PLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGATGGTSSGPLAP
VTGLLGAVTGALGGVTGGAGGSSPLAPVTNVVSTVTNAVGAPALTGGTGAVTNGGSSSNPLAPVTSLIGGLLGGTHGK
>Mature_558_residues
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGSSSGGGDTISTSGTSGTSGTSGTSGTSGTSGTSGTSGT
SGTSGTSGTSGTSGTSGTSGTSGTSGTSGVSSNPVGNVLANSSNIITGVGSTVSGLGSVIGSQSLPGVNPATTKAAGGVV
QSVGGAVTALGNGLGNGLGQLGATKDPLGTTLASTGNVVNQLGGAVTQTGTLVTSLGSGPLSPLAPVTGAVGGLVSTLGG
AVSNGGNTLTNALSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLASTGGNPVT
TGLGNTVSSTGNTVKAVGGLLTGGSGGVTNPLAPLTGLLTTVTGTLGGATGGASSPLAPVTGLVSTVTGALGGAAGGGSG
PLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGATGGTSSGPLAP
VTGLLGAVTGALGGVTGGAGGSSPLAPVTNVVSTVTNAVGAPALTGGTGAVTNGGSSSNPLAPVTSLIGGLLGGTHGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49494; Mature: 49494

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGSSSGGGDTISTSGTSGTS
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCC
GTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGVSSNPVGNVLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
NSSNIITGVGSTVSGLGSVIGSQSLPGVNPATTKAAGGVVQSVGGAVTALGNGLGNGLGQ
CCCCEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGATKDPLGTTLASTGNVVNQLGGAVTQTGTLVTSLGSGPLSPLAPVTGAVGGLVSTLGG
CCCCCCCCHHHHHHCCHHHHHHCCHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AVSNGGNTLTNALSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTV
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH
GNGLNQAGALLASTGGNPVTTGLGNTVSSTGNTVKAVGGLLTGGSGGVTNPLAPLTGLLT
CCCHHHHHHEEECCCCCCEECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
TVTGTLGGATGGASSPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GGSGGPLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGATGGTSSGPLAP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VTGLLGAVTGALGGVTGGAGGSSPLAPVTNVVSTVTNAVGAPALTGGTGAVTNGGSSSNP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
LAPVTSLIGGLLGGTHGK
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIKVIPHGVFRTTLIAATVAAMLSLSACGGSGSISQGLGGGSSSGGGDTISTSGTSGTS
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCC
GTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGVSSNPVGNVLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
NSSNIITGVGSTVSGLGSVIGSQSLPGVNPATTKAAGGVVQSVGGAVTALGNGLGNGLGQ
CCCCEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGATKDPLGTTLASTGNVVNQLGGAVTQTGTLVTSLGSGPLSPLAPVTGAVGGLVSTLGG
CCCCCCCCHHHHHHCCHHHHHHCCHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AVSNGGNTLTNALSTGPIQQVTQTVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTV
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH
GNGLNQAGALLASTGGNPVTTGLGNTVSSTGNTVKAVGGLLTGGSGGVTNPLAPLTGLLT
CCCHHHHHHEEECCCCCCEECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
TVTGTLGGATGGASSPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GGSGGPLAPVTGLVSTVTGALGGAAGGSGGPLAPVTGLVSTVTGALGGATGGTSSGPLAP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VTGLLGAVTGALGGVTGGAGGSSPLAPVTNVVSTVTNAVGAPALTGGTGAVTNGGSSSNP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
LAPVTSLIGGLLGGTHGK
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA