| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066097
Identifier: 78066097
GI number: 78066097
Start: 1610211
End: 1611422
Strand: Direct
Name: 78066097
Synonym: Bcep18194_A4626
Alternate gene names: NA
Gene position: 1610211-1611422 (Clockwise)
Preceding gene: 78066096
Following gene: 78066098
Centisome position: 43.59
GC content: 63.37
Gene sequence:
>1212_bases ATGACTGATCTTCGTCTTACCATGCGGTTCGCTGCAGTGCTCGCCACCGGCGCGCTCGTTGCCGGTTGCGGTACGTCGTC GCCCACGAAAGTGGACTACAAGAGCGATTCGAAATCGAAAGAAGCGTCGCTCGCAGTGCCGCCCAACATGCTCGACGAGA CGGCCGATCAGCGTTCGCTGCCGCCCCAGGGCGGCGCGACTTCCCTGTCCGCGCTTCAGCAGGTCCAGCAGGCCGCGCCT GCGCTGGACACTGTCGCGCCGGCCGTGGCCGGCATGCATATCCAGCGCGACGGCACCGAGAGCTGGCTCGTGATCGACGG CAAGCAGCCGGCCGACGTCTGGCCGCAGGTTCGCCGCTTCTGGCAGGAGCAGGGCTTCCTGCTGGTCGTCGACCAGCGCG ACAAGGGCGTGATGGAAACCGACTGGAACGAAACCCATCCGCAGATCAACGACGGCCTGATCCGTAGCGTGATCTCGAAG GCGATGGGCAACTCGTACGTGACGGCCGAGCGCAACAAGTACCGTACGCGTCTCGATTCGGCGCCGAATGGCGGCACCTA CGTGTTCATCAGCCAGAAGGGGATGCGCGAAGCGATCACGGGTTCGAACAACGATTCGAGCAAGTGGGAGCCGAAGCCGA ATGATCCGGCGCTCGAGACCGAGTACCTGAAGCGATTGATGGCGGTGCTCGCACAGAACGAGCAGCGCGCGAAGAACGGC GAGCCGCCCATCGCGAACATCAAGGACAACACGGTACCGAAGGACAAGGACAAGAAGGCCGACGACGCATCGTCGAAGGC TGCTGCAGCCATTGCCGCGCAAAACGTCTCCCGCACGTCGGCGCAAGCCAACGATGCGGCCGATGCTGCCGTCCCGTCGG AAGTCACGCTTGGCGAGCCGTATGACCGGTCGTGGCTGCACGTCGGTCTCGCGCTTGATCGTGCGAACTTCACGGTCGAC GATCGTGATCGCTCGAAGGGCCTGTATTTCGTGCGCTATGTCGATCCGAAGGATCTGACTTCGGCCGAGCAGGGCTTCTG GAGCCAGCTGTTCCACGGCAAGAAGGAAAAGCAGGCGAAGCAATACCGTGTCAACGTGAAGGCACTCACGGCCGACCAGA CGCGCGTCGCGGTCATCGACGATTCGGGCGCGATCGACACGTCGTCGCCGGCTCGTCAGATCATGGGGCTGCTCGTGAAT CAGCTCCGCTGA
Upstream 100 bases:
>100_bases CTTGCCGGTCGCTTTTTTGCACATCGCGACGCGGCCCCGGTAAAATGCAAGGTTGATCCACGGAAAGCGCCGTGATTTAG CGGAAGAGGATTCCCCGAAC
Downstream 100 bases:
>100_bases TTCCGGCGTTTCTCCGCACCAATGAAAAGCCCGCCATTTGGCGGGCTTTTTTCATGGCCGCTCGCCGGCGCGCACATGTG CTGGAGGTTCGGTCCCTCCC
Product: uncharacterized lipoprotein-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSLPPQGGATSLSALQQVQQAAP ALDTVAPAVAGMHIQRDGTESWLVIDGKQPADVWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISK AMGNSYVTAERNKYRTRLDSAPNGGTYVFISQKGMREAITGSNNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG EPPIANIKDNTVPKDKDKKADDASSKAAAAIAAQNVSRTSAQANDAADAAVPSEVTLGEPYDRSWLHVGLALDRANFTVD DRDRSKGLYFVRYVDPKDLTSAEQGFWSQLFHGKKEKQAKQYRVNVKALTADQTRVAVIDDSGAIDTSSPARQIMGLLVN QLR
Sequences:
>Translated_403_residues MTDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSLPPQGGATSLSALQQVQQAAP ALDTVAPAVAGMHIQRDGTESWLVIDGKQPADVWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISK AMGNSYVTAERNKYRTRLDSAPNGGTYVFISQKGMREAITGSNNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG EPPIANIKDNTVPKDKDKKADDASSKAAAAIAAQNVSRTSAQANDAADAAVPSEVTLGEPYDRSWLHVGLALDRANFTVD DRDRSKGLYFVRYVDPKDLTSAEQGFWSQLFHGKKEKQAKQYRVNVKALTADQTRVAVIDDSGAIDTSSPARQIMGLLVN QLR >Mature_402_residues TDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSLPPQGGATSLSALQQVQQAAPA LDTVAPAVAGMHIQRDGTESWLVIDGKQPADVWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISKA MGNSYVTAERNKYRTRLDSAPNGGTYVFISQKGMREAITGSNNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNGE PPIANIKDNTVPKDKDKKADDASSKAAAAIAAQNVSRTSAQANDAADAAVPSEVTLGEPYDRSWLHVGLALDRANFTVDD RDRSKGLYFVRYVDPKDLTSAEQGFWSQLFHGKKEKQAKQYRVNVKALTADQTRVAVIDDSGAIDTSSPARQIMGLLVNQ LR
Specific function: Unknown
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44017; Mature: 43885
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSL CCCHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCEECCCCHHHHHHHHHCCC PPQGGATSLSALQQVQQAAPALDTVAPAVAGMHIQRDGTESWLVIDGKQPADVWPQVRRF CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCEEEEECCCCHHHHHHHHHH WQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISKAMGNSYVTAERNKYRTRLDS HHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCC APNGGTYVFISQKGMREAITGSNNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG CCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCC EPPIANIKDNTVPKDKDKKADDASSKAAAAIAAQNVSRTSAQANDAADAAVPSEVTLGEP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC YDRSWLHVGLALDRANFTVDDRDRSKGLYFVRYVDPKDLTSAEQGFWSQLFHGKKEKQAK CCCCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCHHCCHHHHHHHHHHHCCHHHHHHH QYRVNVKALTADQTRVAVIDDSGAIDTSSPARQIMGLLVNQLR HHEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSL CCHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCEECCCCHHHHHHHHHCCC PPQGGATSLSALQQVQQAAPALDTVAPAVAGMHIQRDGTESWLVIDGKQPADVWPQVRRF CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCEEEEECCCCHHHHHHHHHH WQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISKAMGNSYVTAERNKYRTRLDS HHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCC APNGGTYVFISQKGMREAITGSNNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG CCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCC EPPIANIKDNTVPKDKDKKADDASSKAAAAIAAQNVSRTSAQANDAADAAVPSEVTLGEP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC YDRSWLHVGLALDRANFTVDDRDRSKGLYFVRYVDPKDLTSAEQGFWSQLFHGKKEKQAK CCCCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCHHCCHHHHHHHHHHHCCHHHHHHH QYRVNVKALTADQTRVAVIDDSGAIDTSSPARQIMGLLVNQLR HHEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]