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The map label for this gene is glcD [H]

Identifier: 78066069

GI number: 78066069

Start: 1579382

End: 1580803

Strand: Reverse

Name: glcD [H]

Synonym: Bcep18194_A4598

Alternate gene names: 78066069

Gene position: 1580803-1579382 (Counterclockwise)

Preceding gene: 78066070

Following gene: 78066068

Centisome position: 42.79

GC content: 68.57

Gene sequence:

>1422_bases
ATGATGTCCTCCGAAGCTTTCGTTTCCGCGTGCCGCGACGCGATCGGCGCCGACCATGTGCTGACCGACCCGCACGATAC
CGAGCCGTTCCTGACCGACTGGCGACGCCGCTACAAGGGTGCCGCGTGCGCGGTGCTGAAGCCCGCAAACACGGCCGAAG
TCGCCGCGCTCGTCAAGCTGGCCAACGCACACGGCATCGCGCTCGTGCCGCAAGGCGGCAACACGGGCCTGGCCGGCGGC
GCCACGCCCGACGCGAGCGGCAGCCAGGCCGTGCTGAGCGTCGCGCGCCTGAACCGCGTGCGCGCGCTCGATCCGCACAA
CAACACGATCACCGTCGAAGCCGGCGTGATCCTCGCCGACGTGCAGGCGCGCGCCCGCGAAGGCGGCCGGCTGTTCGCGC
TGAGCCTCGCGGCGGAAGGCAGCTGCACTATCGGCGGCAACCTGTCGACCAATGCGGGCGGCACCGCGGTGCTGCGCTAC
GGCAACGCGCGCGAGCTGTGTCTCGGGCTTGAAGTCGTGACGCCGCAGGGTGAAATCTGGGACGGCCTGCGCGGACTGCG
CAAGGACAACACGGGCTACGACCTGCGCGACCTGTTCATCGGCGCGGAAGGCACGCTCGGGATCATCACGGCGGCCGTGA
TGAAGCTGCATCCGCTGCCGGCCGCGCAGGTCACTGCCCTCGCCGCGCTCGAATCCCCGCACGCGGCGCTCGATTTCCTC
GCGCTCGCGCAGCGCGCGGCCGGGCCGCTGCTGACCGGCTTCGAGCTGATGTCGGACTTCTGCATGCAGCTCGTCGGCAA
GCACTACCCGCAACTGCGCTACCCGTTCGCGCAGACGCATGCGCAGACGGTGCTGCTCGAACTGTCCGACAACGAAAGCG
AAGCGCATGCGCGCGCGCTGTTCGAGAAACTGATGGAAGAAGCGTTCGAGGCCGGGCTCGTGGTCGACGCGGTGGTCGCG
GAGAATCTCGCGCAGTCGCGCGCGTTCTGGGACCTGCGTGAACACATCCCGCTCGCGCAGGCCGACGAGGGGCTCAACAT
CAAGCACGACATCGCGGTGCCGATTTCGTCGATCGCGCGCTTCATCGACGAGACCGACGCGGCGATCCAGCAGGCTGCGC
CGGGCGCGCGGATGGTCACGTTCGGCCACCTCGGCGACGGCAATCTCCACTACAACGTGCAGATGCCCAAAGGCGGCGAT
CCGAAGGCGTTCCTGGCCGCGTTCCAGGCGCCGATCAACCGGATCGTCTACGACAACGTGCACCGCCACCACGGCACGAT
CAGCGCGGAGCACGGCATCGGCCAGTTGAAGATCGACGACGCGCAGCGTTACAAGTCGCCGGTCGAAACGACGCTGATGC
GCACGCTGAAGACCGCGCTCGACCCGCGCGGCCTGATGAATCCCGGCAAGGTCCTGCGCTGA

Upstream 100 bases:

>100_bases
TGCCGTCGTCTTCTTCGTGGCGGCGCTGGCGTACGTCGCGCCGTTCAAGCGCGCGGCGAAAAAGTCGCGCGCCGCGTCCT
GACCCTTACGCGACAAGGTG

Downstream 100 bases:

>100_bases
AGCCACCCATTCCGGAGCCACGCCCGTGAAAGTCCGTGTCCTGTCCGACCTGCATCTCGAAAGCAACCTGCCCGACGCGA
TCCCGCATGCGGACGCGGAT

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYKGAACAVLKPANTAEVAALVKLANAHGIALVPQGGNTGLAGG
ATPDASGSQAVLSVARLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNARELCLGLEVVTPQGEIWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARALFEKLMEEAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQMPKGGD
PKAFLAAFQAPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR

Sequences:

>Translated_473_residues
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYKGAACAVLKPANTAEVAALVKLANAHGIALVPQGGNTGLAGG
ATPDASGSQAVLSVARLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNARELCLGLEVVTPQGEIWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARALFEKLMEEAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQMPKGGD
PKAFLAAFQAPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR
>Mature_473_residues
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYKGAACAVLKPANTAEVAALVKLANAHGIALVPQGGNTGLAGG
ATPDASGSQAVLSVARLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNARELCLGLEVVTPQGEIWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARALFEKLMEEAFEAGLVVDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQMPKGGD
PKAFLAAFQAPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=453, Percent_Identity=37.3068432671082, Blast_Score=279, Evalue=4e-75,
Organism=Homo sapiens, GI37595756, Length=475, Percent_Identity=31.7894736842105, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI37595754, Length=498, Percent_Identity=30.5220883534137, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI4501993, Length=208, Percent_Identity=32.2115384615385, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1789351, Length=476, Percent_Identity=28.3613445378151, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787977, Length=501, Percent_Identity=24.3512974051896, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI48994907, Length=223, Percent_Identity=27.3542600896861, Blast_Score=75, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17534361, Length=469, Percent_Identity=34.1151385927505, Blast_Score=265, Evalue=3e-71,
Organism=Caenorhabditis elegans, GI71992373, Length=435, Percent_Identity=29.1954022988506, Blast_Score=145, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=435, Percent_Identity=28.0459770114943, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI71992392, Length=354, Percent_Identity=29.9435028248588, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=198, Percent_Identity=25.2525252525253, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=458, Percent_Identity=35.3711790393013, Blast_Score=304, Evalue=2e-83,
Organism=Saccharomyces cerevisiae, GI6320764, Length=470, Percent_Identity=31.4893617021277, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6320027, Length=440, Percent_Identity=27.5, Blast_Score=140, Evalue=3e-34,
Organism=Drosophila melanogaster, GI18921117, Length=459, Percent_Identity=37.037037037037, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24639277, Length=459, Percent_Identity=37.037037037037, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24639275, Length=459, Percent_Identity=37.037037037037, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24653753, Length=219, Percent_Identity=30.1369863013699, Blast_Score=102, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50462; Mature: 50462

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYKGAACAVLKPANTAEVAALVKL
CCCHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ANAHGIALVPQGGNTGLAGGATPDASGSQAVLSVARLNRVRALDPHNNTITVEAGVILAD
HCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEE
VQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNARELCLGLEVVTPQGEIW
CHHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHH
DGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
HHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHHHH
FEKLMEEAFEAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIAR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHH
FIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQMPKGGDPKAFLAAFQAPINRIVYDNV
HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCH
HRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR
HHHCCCEEECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSSEAFVSACRDAIGADHVLTDPHDTEPFLTDWRRRYKGAACAVLKPANTAEVAALVKL
CCCHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
ANAHGIALVPQGGNTGLAGGATPDASGSQAVLSVARLNRVRALDPHNNTITVEAGVILAD
HCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEE
VQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNARELCLGLEVVTPQGEIW
CHHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHH
DGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFL
HHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ALAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESEAHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHHHH
FEKLMEEAFEAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIAR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHH
FIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQMPKGGDPKAFLAAFQAPINRIVYDNV
HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCH
HRHHGTISAEHGIGQLKIDDAQRYKSPVETTLMRTLKTALDPRGLMNPGKVLR
HHHCCCEEECCCCCEEEECHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]