Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 78066060

GI number: 78066060

Start: 1569271

End: 1570944

Strand: Direct

Name: tse [H]

Synonym: Bcep18194_A4589

Alternate gene names: 78066060

Gene position: 1569271-1570944 (Clockwise)

Preceding gene: 78066058

Following gene: 78066061

Centisome position: 42.48

GC content: 69.77

Gene sequence:

>1674_bases
ATGAAAGCAGCATCTTTGCATCCACAGCCAGGCGCGGCACCCGCCGCACCCGATGTTGCCGCCGGTCGCGCCGCCCGGCG
CCTGCGGGCGGCGCGTCGCGAGCGCCGGCCGTGGACCGTCAAGGCGACGTTGCGCGCCGCATTCGCGATCCTGCTTGCCG
GTACGCTGGCGATCGGCATGTTTTCGCTCTGGCAGATCAGCCGGCTGAATGCGTCGATCGCGTCGGTCTACGAGCAGGGC
CACGTCGCGAGCCGCGCGGCCGAGGAGGTTCGGGCCGAAGTGCTGCGCGCGAGCCGTGCCCAGAAGATGCTGCTGACTGC
GACTACCGCGAAGGAGCGCGACGAACTGGGTGCCGAGGTGGGCGCGGGGCTCGCGTCGATCGGCCAGGCGCTCGGCACGC
TGCAGCGCTACGCGGATCCGGCCGATGCCGACGATTCGGCGCGGCTGCGCGCATTCTCGACGGCGGTCGGCACATGGAGC
GCGCATCTGCGCGATTTCGTCGAACTCGTGCGCGCGCAGCCGCTCGACCTGTCGCAGATGAACTGGCAGGTCGGCACGCA
GGACGTATCGTTGCTGGTCGAAACCGGCAAGCTCGAGAAACTCGTCGCCGAACTCGTGAAGACGCGCGGTGCGAAGTCGA
AGGCCACGCTCGATGCGTCCGCCACCATTTTCTCGTCGTCGTTCGCGATGATCGCGGCGATGACGGTTGCGCTGATCGTG
CTCGCGATCGTGATCGCCGAGCGCGTCGTGCGCCGTCTCGCGTCGCAGCTCGGCGGCGAGCCCGCGCACGCGAAGGCGAT
CGCCGCGGACATCGCGCGCGGCGACCTGACGCGACCGATCAAGCTGGGCCGGCACGACCGCGACAGCATGGTGCGTGCAC
TGGCCGAGATGCAGACGGGGCTTGCGGCGACCGTCGGCGAGATCGCCGTCAGCGCCGAGGCGATCGCGGCCGCATCGGGC
GAGATCTCCACCGGCAATCTCGATCTGTCGAAGCGCACCGAGCAGCAGGCCGTCGCGCTCGAACGCACCGCGGCGAGCAT
GGAGCAGCTCACGTCGACCGTACGGCAGAACGCCGAGAATGCGCGGCAGGCGAGCGCGCTCGCGGCCAATGCGTCGGCTG
TTGCGGAGACGGGGGGGGACGTCGTCGGGCGTGTGGTGGCGACGATGAGCGAGATCGACGACAGCGCGAAGAACATCCGC
GACATCATCGGCACGATCGAGGGGATCGCGTTCCAGACCAACATTCTCGCGTTGAACGCAGCGGTCGAGGCCGCACGCGC
CGGCGAACAGGGGCGCGGCTTCTCGGTGGTCGCGGGCGAGGTTCGCCTGCTCGCGCAGCGCGCGGCGACCGCAGCGAAGG
AGATCCGCGCACTGATCGGTGCATCGGTCGAGCGTGTCGCGAACGGCGCGGCGCTCGCGCACGATGCGGGCCGCACGATG
GGTGACGTCGTGCGCGCGGTCAAGCGCGTGACCGACATCATCGGTGAAATTTCTGCTGCATCGGACGAGCAGAGCGCCGG
GATCGACGAGATCGGCCGCGCGGTCACGCAGATGGACGCCGGCACCCAGCAGAACGCGGCACTCGTCGAGCAGGCGGCTG
CCGCGGCGAACGCGCTCGACGAGCAGGCGCAGGCGTTGAAGTCGCTGGTCGGGCGCTTTCGCATCGCGGCCTGA

Upstream 100 bases:

>100_bases
CTATCCGCCGGTGCGGGCGCAGGACGCGCGGCATGGCCAGCCATCGCGGGACCGCCGGGACCGACCTTTCCGGCCACGTG
ATCAATACGGGGATAGTTCG

Downstream 100 bases:

>100_bases
GCGACACGCGGTCGCGGGCCGGCCACCCGCGACGCGCGCATTCCGCCGCACACCTGTTGTTCGGTGACAAAACCGGCAGT
CACGCGGCGCGCAATCCCCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MKAASLHPQPGAAPAAPDVAAGRAARRLRAARRERRPWTVKATLRAAFAILLAGTLAIGMFSLWQISRLNASIASVYEQG
HVASRAAEEVRAEVLRASRAQKMLLTATTAKERDELGAEVGAGLASIGQALGTLQRYADPADADDSARLRAFSTAVGTWS
AHLRDFVELVRAQPLDLSQMNWQVGTQDVSLLVETGKLEKLVAELVKTRGAKSKATLDASATIFSSSFAMIAAMTVALIV
LAIVIAERVVRRLASQLGGEPAHAKAIAADIARGDLTRPIKLGRHDRDSMVRALAEMQTGLAATVGEIAVSAEAIAAASG
EISTGNLDLSKRTEQQAVALERTAASMEQLTSTVRQNAENARQASALAANASAVAETGGDVVGRVVATMSEIDDSAKNIR
DIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFSVVAGEVRLLAQRAATAAKEIRALIGASVERVANGAALAHDAGRTM
GDVVRAVKRVTDIIGEISAASDEQSAGIDEIGRAVTQMDAGTQQNAALVEQAAAAANALDEQAQALKSLVGRFRIAA

Sequences:

>Translated_557_residues
MKAASLHPQPGAAPAAPDVAAGRAARRLRAARRERRPWTVKATLRAAFAILLAGTLAIGMFSLWQISRLNASIASVYEQG
HVASRAAEEVRAEVLRASRAQKMLLTATTAKERDELGAEVGAGLASIGQALGTLQRYADPADADDSARLRAFSTAVGTWS
AHLRDFVELVRAQPLDLSQMNWQVGTQDVSLLVETGKLEKLVAELVKTRGAKSKATLDASATIFSSSFAMIAAMTVALIV
LAIVIAERVVRRLASQLGGEPAHAKAIAADIARGDLTRPIKLGRHDRDSMVRALAEMQTGLAATVGEIAVSAEAIAAASG
EISTGNLDLSKRTEQQAVALERTAASMEQLTSTVRQNAENARQASALAANASAVAETGGDVVGRVVATMSEIDDSAKNIR
DIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFSVVAGEVRLLAQRAATAAKEIRALIGASVERVANGAALAHDAGRTM
GDVVRAVKRVTDIIGEISAASDEQSAGIDEIGRAVTQMDAGTQQNAALVEQAAAAANALDEQAQALKSLVGRFRIAA
>Mature_557_residues
MKAASLHPQPGAAPAAPDVAAGRAARRLRAARRERRPWTVKATLRAAFAILLAGTLAIGMFSLWQISRLNASIASVYEQG
HVASRAAEEVRAEVLRASRAQKMLLTATTAKERDELGAEVGAGLASIGQALGTLQRYADPADADDSARLRAFSTAVGTWS
AHLRDFVELVRAQPLDLSQMNWQVGTQDVSLLVETGKLEKLVAELVKTRGAKSKATLDASATIFSSSFAMIAAMTVALIV
LAIVIAERVVRRLASQLGGEPAHAKAIAADIARGDLTRPIKLGRHDRDSMVRALAEMQTGLAATVGEIAVSAEAIAAASG
EISTGNLDLSKRTEQQAVALERTAASMEQLTSTVRQNAENARQASALAANASAVAETGGDVVGRVVATMSEIDDSAKNIR
DIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFSVVAGEVRLLAQRAATAAKEIRALIGASVERVANGAALAHDAGRTM
GDVVRAVKRVTDIIGEISAASDEQSAGIDEIGRAVTQMDAGTQQNAALVEQAAAAANALDEQAQALKSLVGRFRIAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=58.4415584415584, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI2367378, Length=256, Percent_Identity=61.71875, Blast_Score=285, Evalue=7e-78,
Organism=Escherichia coli, GI1788194, Length=534, Percent_Identity=41.0112359550562, Blast_Score=283, Evalue=3e-77,
Organism=Escherichia coli, GI1787690, Length=330, Percent_Identity=52.4242424242424, Blast_Score=271, Evalue=6e-74,
Organism=Escherichia coli, GI1789453, Length=368, Percent_Identity=35.8695652173913, Blast_Score=192, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57986; Mature: 57986

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAASLHPQPGAAPAAPDVAAGRAARRLRAARRERRPWTVKATLRAAFAILLAGTLAIGM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
FSLWQISRLNASIASVYEQGHVASRAAEEVRAEVLRASRAQKMLLTATTAKERDELGAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGLASIGQALGTLQRYADPADADDSARLRAFSTAVGTWSAHLRDFVELVRAQPLDLSQM
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
NWQVGTQDVSLLVETGKLEKLVAELVKTRGAKSKATLDASATIFSSSFAMIAAMTVALIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
LAIVIAERVVRRLASQLGGEPAHAKAIAADIARGDLTRPIKLGRHDRDSMVRALAEMQTG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHH
LAATVGEIAVSAEAIAAASGEISTGNLDLSKRTEQQAVALERTAASMEQLTSTVRQNAEN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQASALAANASAVAETGGDVVGRVVATMSEIDDSAKNIRDIIGTIEGIAFQTNILALNA
HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEAARAGEQGRGFSVVAGEVRLLAQRAATAAKEIRALIGASVERVANGAALAHDAGRTM
HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH
GDVVRAVKRVTDIIGEISAASDEQSAGIDEIGRAVTQMDAGTQQNAALVEQAAAAANALD
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EQAQALKSLVGRFRIAA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAASLHPQPGAAPAAPDVAAGRAARRLRAARRERRPWTVKATLRAAFAILLAGTLAIGM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
FSLWQISRLNASIASVYEQGHVASRAAEEVRAEVLRASRAQKMLLTATTAKERDELGAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGLASIGQALGTLQRYADPADADDSARLRAFSTAVGTWSAHLRDFVELVRAQPLDLSQM
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
NWQVGTQDVSLLVETGKLEKLVAELVKTRGAKSKATLDASATIFSSSFAMIAAMTVALIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
LAIVIAERVVRRLASQLGGEPAHAKAIAADIARGDLTRPIKLGRHDRDSMVRALAEMQTG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHH
LAATVGEIAVSAEAIAAASGEISTGNLDLSKRTEQQAVALERTAASMEQLTSTVRQNAEN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARQASALAANASAVAETGGDVVGRVVATMSEIDDSAKNIRDIIGTIEGIAFQTNILALNA
HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEAARAGEQGRGFSVVAGEVRLLAQRAATAAKEIRALIGASVERVANGAALAHDAGRTM
HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH
GDVVRAVKRVTDIIGEISAASDEQSAGIDEIGRAVTQMDAGTQQNAALVEQAAAAANALD
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EQAQALKSLVGRFRIAA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]