| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yhjS [H]
Identifier: 78065999
GI number: 78065999
Start: 1497041
End: 1499011
Strand: Direct
Name: yhjS [H]
Synonym: Bcep18194_A4528
Alternate gene names: 78065999
Gene position: 1497041-1499011 (Clockwise)
Preceding gene: 78065998
Following gene: 78066000
Centisome position: 40.52
GC content: 73.21
Gene sequence:
>1971_bases GTGAATACGGAACTCGATGCCACCCGTCCCGCGCTCGGCACCGCCGGCCTGCTGGGTCGCCTGCGTACGCTGCTGGGCGC GCCGGCCGGCGGCCGTGTCGGCACGGTGAGCCGGCTCGCGATCGACGGCTTGCCCGATGCGTGGACGCAACTGGAAGCCG GCGGCCTGTATGCGATCTACGCGGCCGGCGGCACGTCGGCTTGCGATGCGCTCGTGTGGGAGAGTGCGCGACAGGCACGC ACGCGCGACGTGACGGTCGTGCTTGCGCGCGAGGCGGCGCAGGTCGCCGAACAGATGCAGGCGCGCGGTTTCGCGGGCGG CGCACTGCCGGCCAGCTGGCCGCGCAACCTGAACGTGCTGGCGATGCCGCCTGCGGCCGAGCCGGCCAACGGTGACGGCA CCAGCACCGGCGCCGGCGCAACGGCGGACGCACCGCGCCGCGCGGCGCCGGGCCCGTTCGCACGGCTGACCGGCGGCCTG CGCGCGATGAAGCGCTACGGCTTTCGCGCGCGCTCGCTGTATTTCGTCGAAGGCGCGCAGCGCTGGTTCAGCTGGGACGA CCCGATCGCGCTCGCCGACGAGGCGCATGCTCTCGCCGACTGGTGCCGCACGCGCCGGATCGCGCTCGTGCTGCTGCTCG ATCCCGAAGCGACCCGTGCGGGCGACGAAGCGCGCACCGACGATGCGCCGCTCGTACGCGATGCGGATCGTACGCCGCGC AGCGGTTTCCACGGTATCTGCTCGGGCGTCGCGCAGTTGCAGCGCACGCACGGCGAGCTGCTGTGGGTCGTCGATTTCTG GCGTGCGGGCGACACGCTTGCGGCCGGCGAAGTCCGGCCGCTGCGCTTTGCGCCGGGCGGCCGGCTGTCGGCGAGCGTCG ACGGCGGCGCGACCGAGCCGGCGCACCGGATGAAGCTCGCGAGCGACGAAGATCGTGTCGTCGTCAGCCGCGCAGTGCTC GAAGGCACGAACCGCGCGCCGGACGGCTGGGAGATCGTCGAAGACAACGCGGCCGTCGTCGCGGCGTGCGCGCATGCGCA AGCGGCGACCGCGGTGCTCGTGTTCCGCTCGCATGCGCAACTCGAAGCGCTCTGCGCCGACGTGCACGCGCTGCGCCGGC AGTGCGGCGGTGCGCTGAAGATCGCGGTCGTCGAGCGCGGCGAAGTGCTGCGCCAGCAGTTCGAGATGCTCGTGCTGAGC GTCGGCGCGAGCCGCGTCGTCGCGCGCGACCTGCCGGTATCGCGGATGCAGGCCGCCGTGCACGCGCTGCGCGGCCAGCT CTATGCGCGGCCCGTCGCGGCCGACTACCGTGCGGCGCTCGCGGCCGCGCTCGGCGATTCGGTGCTCGGCTACCTGCCGG TCGGCGCGTTCTGCCTGCGGATTCGCGCGGTGCTCGATCGCGGCGCCGTGCTGGCGCTGCCGCACACGCTCGCGAAGATC TCGCTGCTGCCGGGCGTGTCGCACGTCGACGCGCTGCGGTTTTGCCGGCCGCGCCGCGCGGGCGACGTCGTGACGGCCGA TGCCGCGCACCTGTACGTGTTCCTGTTCGCGTGCGAGCCGGCCGATGCGGAGGACGCGCTCGCGCGCATCTTCGACGTGC CGGTCGACGCGCTGTCCGACCGTGTCGTGTGCCTCGGACACGGCAGCATCGACACCGAGCTCAATGCGCTGAAGGCCGAG AACCGCCGCGCGCCGATCGCCGACTACAGTGATCTGTTCGCGGCCACGCAGCCGGCGGGTGCGACCCGCAAATCGTCCGT GCGCGCCGATCCCGGCGCCGCGTTGCCCGACGCGAGCGAAGTGAGCGGCGCGATCGACGCAATCGATGCGATCGTCGCGC TCGAGGCGATCGGTGCGACGCCGACAGCCGCGGCTATCGATGCATCGGCGCCGGAACCCGTCATTGCCGCCGCGCGCAAG CGCAGCGCCGTCCGCAGCGCGATGCCGCTGCGCAAGGAGGGGGTCGCATGA
Upstream 100 bases:
>100_bases GCTGGTGTACCTGCGTTATGCGTTCGACGCGCGCGCGCAACGCAGCTGGCTCGTCACGCCGACGCCGGTGCGGCTTTATT CGGATTACTAGGGGAACGCC
Downstream 100 bases:
>100_bases TCGCCGTCATCGTCATCGGTTTCATCGTCGGCATCGTGATCGCGGTGCCGGTGTGGATCATCGCGCAGCACCTCGGCATC GGCCGCGGCTTTCATGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MNTELDATRPALGTAGLLGRLRTLLGAPAGGRVGTVSRLAIDGLPDAWTQLEAGGLYAIYAAGGTSACDALVWESARQAR TRDVTVVLAREAAQVAEQMQARGFAGGALPASWPRNLNVLAMPPAAEPANGDGTSTGAGATADAPRRAAPGPFARLTGGL RAMKRYGFRARSLYFVEGAQRWFSWDDPIALADEAHALADWCRTRRIALVLLLDPEATRAGDEARTDDAPLVRDADRTPR SGFHGICSGVAQLQRTHGELLWVVDFWRAGDTLAAGEVRPLRFAPGGRLSASVDGGATEPAHRMKLASDEDRVVVSRAVL EGTNRAPDGWEIVEDNAAVVAACAHAQAATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLS VGASRVVARDLPVSRMQAAVHALRGQLYARPVAADYRAALAAALGDSVLGYLPVGAFCLRIRAVLDRGAVLALPHTLAKI SLLPGVSHVDALRFCRPRRAGDVVTADAAHLYVFLFACEPADAEDALARIFDVPVDALSDRVVCLGHGSIDTELNALKAE NRRAPIADYSDLFAATQPAGATRKSSVRADPGAALPDASEVSGAIDAIDAIVALEAIGATPTAAAIDASAPEPVIAAARK RSAVRSAMPLRKEGVA
Sequences:
>Translated_656_residues MNTELDATRPALGTAGLLGRLRTLLGAPAGGRVGTVSRLAIDGLPDAWTQLEAGGLYAIYAAGGTSACDALVWESARQAR TRDVTVVLAREAAQVAEQMQARGFAGGALPASWPRNLNVLAMPPAAEPANGDGTSTGAGATADAPRRAAPGPFARLTGGL RAMKRYGFRARSLYFVEGAQRWFSWDDPIALADEAHALADWCRTRRIALVLLLDPEATRAGDEARTDDAPLVRDADRTPR SGFHGICSGVAQLQRTHGELLWVVDFWRAGDTLAAGEVRPLRFAPGGRLSASVDGGATEPAHRMKLASDEDRVVVSRAVL EGTNRAPDGWEIVEDNAAVVAACAHAQAATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLS VGASRVVARDLPVSRMQAAVHALRGQLYARPVAADYRAALAAALGDSVLGYLPVGAFCLRIRAVLDRGAVLALPHTLAKI SLLPGVSHVDALRFCRPRRAGDVVTADAAHLYVFLFACEPADAEDALARIFDVPVDALSDRVVCLGHGSIDTELNALKAE NRRAPIADYSDLFAATQPAGATRKSSVRADPGAALPDASEVSGAIDAIDAIVALEAIGATPTAAAIDASAPEPVIAAARK RSAVRSAMPLRKEGVA >Mature_656_residues MNTELDATRPALGTAGLLGRLRTLLGAPAGGRVGTVSRLAIDGLPDAWTQLEAGGLYAIYAAGGTSACDALVWESARQAR TRDVTVVLAREAAQVAEQMQARGFAGGALPASWPRNLNVLAMPPAAEPANGDGTSTGAGATADAPRRAAPGPFARLTGGL RAMKRYGFRARSLYFVEGAQRWFSWDDPIALADEAHALADWCRTRRIALVLLLDPEATRAGDEARTDDAPLVRDADRTPR SGFHGICSGVAQLQRTHGELLWVVDFWRAGDTLAAGEVRPLRFAPGGRLSASVDGGATEPAHRMKLASDEDRVVVSRAVL EGTNRAPDGWEIVEDNAAVVAACAHAQAATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLS VGASRVVARDLPVSRMQAAVHALRGQLYARPVAADYRAALAAALGDSVLGYLPVGAFCLRIRAVLDRGAVLALPHTLAKI SLLPGVSHVDALRFCRPRRAGDVVTADAAHLYVFLFACEPADAEDALARIFDVPVDALSDRVVCLGHGSIDTELNALKAE NRRAPIADYSDLFAATQPAGATRKSSVRADPGAALPDASEVSGAIDAIDAIVALEAIGATPTAAAIDASAPEPVIAAARK RSAVRSAMPLRKEGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789958, Length=251, Percent_Identity=33.0677290836653, Blast_Score=135, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017745 [H]
Pfam domain/function: PF10995 DUF2819 [H]
EC number: NA
Molecular weight: Translated: 68800; Mature: 68800
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTELDATRPALGTAGLLGRLRTLLGAPAGGRVGTVSRLAIDGLPDAWTQLEAGGLYAIY CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCHHHHHHCCCCEEEEE AAGGTSACDALVWESARQARTRDVTVVLAREAAQVAEQMQARGFAGGALPASWPRNLNVL ECCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE AMPPAAEPANGDGTSTGAGATADAPRRAAPGPFARLTGGLRAMKRYGFRARSLYFVEGAQ EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECHH RWFSWDDPIALADEAHALADWCRTRRIALVLLLDPEATRAGDEARTDDAPLVRDADRTPR HHCCCCCCEECHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC SGFHGICSGVAQLQRTHGELLWVVDFWRAGDTLAAGEVRPLRFAPGGRLSASVDGGATEP CCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCCCEEEECCCCCEEEECCCCCCCC AHRMKLASDEDRVVVSRAVLEGTNRAPDGWEIVEDNAAVVAACAHAQAATAVLVFRSHAQ HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEHHHHHHHHHEEEHHHCCHH LEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLSVGASRVVARDLPVSRMQAAV HHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHH HALRGQLYARPVAADYRAALAAALGDSVLGYLPVGAFCLRIRAVLDRGAVLALPHTLAKI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHH SLLPGVSHVDALRFCRPRRAGDVVTADAAHLYVFLFACEPADAEDALARIFDVPVDALSD HHCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHCC RVVCLGHGSIDTELNALKAENRRAPIADYSDLFAATQPAGATRKSSVRADPGAALPDASE CEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH VSGAIDAIDAIVALEAIGATPTAAAIDASAPEPVIAAARKRSAVRSAMPLRKEGVA HHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MNTELDATRPALGTAGLLGRLRTLLGAPAGGRVGTVSRLAIDGLPDAWTQLEAGGLYAIY CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCHHHHHHCCCCEEEEE AAGGTSACDALVWESARQARTRDVTVVLAREAAQVAEQMQARGFAGGALPASWPRNLNVL ECCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE AMPPAAEPANGDGTSTGAGATADAPRRAAPGPFARLTGGLRAMKRYGFRARSLYFVEGAQ EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECHH RWFSWDDPIALADEAHALADWCRTRRIALVLLLDPEATRAGDEARTDDAPLVRDADRTPR HHCCCCCCEECHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC SGFHGICSGVAQLQRTHGELLWVVDFWRAGDTLAAGEVRPLRFAPGGRLSASVDGGATEP CCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCCCEEEECCCCCEEEECCCCCCCC AHRMKLASDEDRVVVSRAVLEGTNRAPDGWEIVEDNAAVVAACAHAQAATAVLVFRSHAQ HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEHHHHHHHHHEEEHHHCCHH LEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLSVGASRVVARDLPVSRMQAAV HHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHH HALRGQLYARPVAADYRAALAAALGDSVLGYLPVGAFCLRIRAVLDRGAVLALPHTLAKI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHH SLLPGVSHVDALRFCRPRRAGDVVTADAAHLYVFLFACEPADAEDALARIFDVPVDALSD HHCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHCC RVVCLGHGSIDTELNALKAENRRAPIADYSDLFAATQPAGATRKSSVRADPGAALPDASE CEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH VSGAIDAIDAIVALEAIGATPTAAAIDASAPEPVIAAARKRSAVRSAMPLRKEGVA HHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]