| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065959
Identifier: 78065959
GI number: 78065959
Start: 1453091
End: 1453999
Strand: Direct
Name: 78065959
Synonym: Bcep18194_A4488
Alternate gene names: NA
Gene position: 1453091-1453999 (Clockwise)
Preceding gene: 78065958
Following gene: 78065960
Centisome position: 39.34
GC content: 65.9
Gene sequence:
>909_bases ATGAAATTCGCATTGCGACGGGTGCCGTTGGCACTCCTGATCGCCGGGGCCATTCAGGTTCCGGCGTCGGCCACGGAGAA CGGGCAGATCAGCTATCCGTTCGGCGTCAACACGGTACTGAACGGGCTGCTTCCGCCGCCCGGCAATACGCAGTACTTCA ACTACGCGCTGTACTCCGCATCGAACCGGTTTGCCGGGCCGGACGGCGGCAGCGCGGTGCCGGGGTTCCACCTGAGCGTG GTCGCGGAGACGCCGCGCGTGGTCCACACGTGGGGCGCGACGTTCGGGCCGTTTTCGTTGTCGAGCAGCGCGATCGTCCC GATCGTCCACCTGCATCTGTCGACGCCGGGCGGCACGGGCAACCGCACGTCGCTCGGCGACGTGATCCTCGAGCCGTTCA TGCTCAACTATGCGAACGCATCGAAGACGTTCTTCGCGTTCTTCTCGCCGTCGTTCGCGGTGCCGACCGGCGCGTATGCG GCGAACCGGATCGCGAACACGGGGCTGAACACCTATGCGTTCCTGCCGTACGTCAGCACCACCTGGTTTCCGGGCCGCGA CTGGGAGATCTCGACGACCACGCTGCTGGAGCTGAATTCGCCGAACCATGCGACGCGGTACCACTCGGGGGCGGTCGCCG TGCTCGACTACCTGATCGGCTATTCGATCGACCGGCGCGTGCAGCTCGGCGTGCAGGGCACGTTCCTGAAGCAGTTCACC GACGATACGCAGGACGGCGTCAAGGTCGCGTCGGACGGCTTTCGCGGGCAATCGGTCGCGATCGGCCCGCAGCTGCGCTA CATGTGGGGGCCGGCGTCGGGCGTGGTCGTGAAATACCAGCACGAGTTCGCGGTGCGCAACCGGCCGCAGGGCGACAAGC TGTGGGTGCAGTTCAGTTTCCCGTTGTAG
Upstream 100 bases:
>100_bases GTCGTCTTTTTCGCCGCTGTCGTGCGCTTTACATTGCGTCTCCCCGGGCCTGCGATGCCCGGCTCGCGATTACACGATAA CAATCCGGTCTGGAGACGAC
Downstream 100 bases:
>100_bases ACGCGGGTGCGGTGCCCGTCGGCCGGGCGCCCGGCGCAAGCTGACAAAATCCTGACGAAGTGAATTGATATTTTGTATCA TCTGACGTTTTGCGCCACCG
Product: protein involved in meta-pathway of phenol degradation
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKFALRRVPLALLIAGAIQVPASATENGQISYPFGVNTVLNGLLPPPGNTQYFNYALYSASNRFAGPDGGSAVPGFHLSV VAETPRVVHTWGATFGPFSLSSSAIVPIVHLHLSTPGGTGNRTSLGDVILEPFMLNYANASKTFFAFFSPSFAVPTGAYA ANRIANTGLNTYAFLPYVSTTWFPGRDWEISTTTLLELNSPNHATRYHSGAVAVLDYLIGYSIDRRVQLGVQGTFLKQFT DDTQDGVKVASDGFRGQSVAIGPQLRYMWGPASGVVVKYQHEFAVRNRPQGDKLWVQFSFPL
Sequences:
>Translated_302_residues MKFALRRVPLALLIAGAIQVPASATENGQISYPFGVNTVLNGLLPPPGNTQYFNYALYSASNRFAGPDGGSAVPGFHLSV VAETPRVVHTWGATFGPFSLSSSAIVPIVHLHLSTPGGTGNRTSLGDVILEPFMLNYANASKTFFAFFSPSFAVPTGAYA ANRIANTGLNTYAFLPYVSTTWFPGRDWEISTTTLLELNSPNHATRYHSGAVAVLDYLIGYSIDRRVQLGVQGTFLKQFT DDTQDGVKVASDGFRGQSVAIGPQLRYMWGPASGVVVKYQHEFAVRNRPQGDKLWVQFSFPL >Mature_302_residues MKFALRRVPLALLIAGAIQVPASATENGQISYPFGVNTVLNGLLPPPGNTQYFNYALYSASNRFAGPDGGSAVPGFHLSV VAETPRVVHTWGATFGPFSLSSSAIVPIVHLHLSTPGGTGNRTSLGDVILEPFMLNYANASKTFFAFFSPSFAVPTGAYA ANRIANTGLNTYAFLPYVSTTWFPGRDWEISTTTLLELNSPNHATRYHSGAVAVLDYLIGYSIDRRVQLGVQGTFLKQFT DDTQDGVKVASDGFRGQSVAIGPQLRYMWGPASGVVVKYQHEFAVRNRPQGDKLWVQFSFPL
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32689; Mature: 32689
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFALRRVPLALLIAGAIQVPASATENGQISYPFGVNTVLNGLLPPPGNTQYFNYALYSA CCCHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEEEC SNRFAGPDGGSAVPGFHLSVVAETPRVVHTWGATFGPFSLSSSAIVPIVHLHLSTPGGTG CCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCC NRTSLGDVILEPFMLNYANASKTFFAFFSPSFAVPTGAYAANRIANTGLNTYAFLPYVST CCCCHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCEE TWFPGRDWEISTTTLLELNSPNHATRYHSGAVAVLDYLIGYSIDRRVQLGVQGTFLKQFT CCCCCCCCEEEEEEEEEECCCCCCCEECCCHHHHHHHHHCCCCCCEEEECCCEEEHHHHC DDTQDGVKVASDGFRGQSVAIGPQLRYMWGPASGVVVKYQHEFAVRNRPQGDKLWVQFSF CCCCCCEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEEEEEHCCCCCCCCEEEEEEEC PL CC >Mature Secondary Structure MKFALRRVPLALLIAGAIQVPASATENGQISYPFGVNTVLNGLLPPPGNTQYFNYALYSA CCCHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEEEC SNRFAGPDGGSAVPGFHLSVVAETPRVVHTWGATFGPFSLSSSAIVPIVHLHLSTPGGTG CCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCC NRTSLGDVILEPFMLNYANASKTFFAFFSPSFAVPTGAYAANRIANTGLNTYAFLPYVST CCCCHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCEE TWFPGRDWEISTTTLLELNSPNHATRYHSGAVAVLDYLIGYSIDRRVQLGVQGTFLKQFT CCCCCCCCEEEEEEEEEECCCCCCCEECCCHHHHHHHHHCCCCCCEEEECCCEEEHHHHC DDTQDGVKVASDGFRGQSVAIGPQLRYMWGPASGVVVKYQHEFAVRNRPQGDKLWVQFSF CCCCCCEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEEEEEHCCCCCCCCEEEEEEEC PL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA