| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is xdhA [C]
Identifier: 78065942
GI number: 78065942
Start: 1433022
End: 1435346
Strand: Direct
Name: xdhA [C]
Synonym: Bcep18194_A4471
Alternate gene names: 78065942
Gene position: 1433022-1435346 (Clockwise)
Preceding gene: 78065941
Following gene: 78065943
Centisome position: 38.79
GC content: 70.37
Gene sequence:
>2325_bases ATGAGCGCGCCCGAACTCTCCGTCCATAACGAAAGCCGCCGCGCGCTGCTGCTCGGCTTCGCATCCGGCGGGCTGCTGCT CGCGTTCGGCGTGCCGTCGCTCGTGTGCGCAGCCGTGCCGGTGCAGCCGCCCGTCAGCGCGAATCCGCAGTATGGCGGCG CAGGGATGCCGCACGGGTTGCGCGACGATCCGCACCTGTTCGTCGCGATCGCGCCGGACGGCACGGTCACCGTGACCTGC ATCCGCTCCGAGATGGGGCAGGGCGTGCGCACGAGCGTCGCGCTCGTGGTGGCGGACGAGCTGGGTGCCGACTGGGCACG CGTGAAGGTCGCGCAGGCCGTCGGCGACGAGCCGCGCTACGGCAACCAGAACACCGACGGATCGCGCAGCCTGCGCCAGA GTTTCGCCGCGCTGCGCCGCGCGGGCGCAGCCGCGCGCACGATGCTCGAACAGGCGGCTGCCGCGGCGTGGGGCGTCGAT ACGCGTCAGGTCAAGGCGACGGTGCATGAGGTCGTCGACACGAAGAGCGGGCGCAAGCTCGGCTTCGGCGAACTGGCGGC GAAAGCGGCCGCGCTGCCGGCACCGGATCCGGCAACGGTGGCGCTGAAAGCGCCGGCCGAATTCCGCTATATCGGCAAGG GCGAAACCGCGCTGATCGACGGGCGCGATATCGTCGGCGGCCGCGCGCACTACGGGATCGACACGCGGCTCGACGGGATG CTGTATGCGGTCGTCGCACGCCCGCCGGCGTACGGTGACACGGTGGCGTCGTTCGACGCATCGGCGGCGGAGAAGCTGCC GGGTGTCGTCAAGGTCGTGCCGCTCGCGCCGACGCCGCTGCCGTCGGGATTCCAGCCGCTCGGCGGCGTGGCCGTCGTCG CGCACGATACGTGGACGGCGATCCAGGCGCGTGCGCAGCTGAAGATCGACTGGAAGCGCGGGCCCCATGCGAACTACGAT TCGGCCGCCTATCGCAAGACGCTCGAAGCGGCTGCCGCGCAACCGGGCGACGTGATCCGCAATGATGGCGACGCGGCCAC GGCGCTCGCCGGCGCCGCGAAGCGCGTGCGTGCGACTTACTACATCCCGCATCTCGCGCACGCGACGATGGAGCCGCCGG CGGCCGTCGCGCGCGTGGCGGACGGCCGCTGCGAAGTGTGGACCTGCACGCAGGCGCCGCAGACCACGCGCGACGAGGTC GCGAAAGCGCTCGGGTTGCCGACGGAGCGCGTGACGGTCAACGTGACGCTGCTCGGCGGCGGTTTCGGCCGCAAGTCGAA ACCCGATTACGTGGTGGAGGCGGCGCTGCTGTCGAAGGCGGTCGGCGCGCCCGTCAAGCTGACGTTCACGCGCGAGGACG ACATCGCGCACGACTATTTCCACGCGGTGTCGCTCGAGGCGTTCGAGGGCGGGATCGATGCATCGGGGAAAGTGGTCGCG TGGCAGCATCGCACGGTCGCGCCGTCGATCCAGTCGACGTTCCGGGCCGGCGTCGTGCATGAGCAGCCGGGCGAGCTCGC GCAGGGGATTGCGGACCTGCCGTTCGCGATTCCGAACGTGCGAATCGAAAATCCGGCTGCGGAAGCGCATACGCGGATCG GCTGGTTCCGCTCGGTCTACAACATCCCGCATGCGTTCGGGATCCAGAGCTTCGTGTCGGAGCTGGCGCATGCGGCCGGT CGCGACCCGAAGGATTTCCTGCTCGAACTGATCGGGCCTGCGCGGCGATTCGAGCCGCACATCACGGTGAAGAACGTGAA CTACGGCGAGGATCCGGCGCTGTATCCGGTCGATACCGGCCGGCTGCGGCGCGTGGTCGAGACGGTCGCGCGCGAGGCCG GCTGGGGGCGCAAGCTGCCGAAGGGGTACGGGCTCGGGATCGCCGCGCATCGCAGCTTCGTGTCGTACACGGCGGCGGTG TGCGAGGTGCAGGTCGATGCCGACGGCAAGATCACGGTGCCGCGGGTCGACATCGCGATCGACTGCGGGCCGCAGGTCAA TCCGGAGCGGGTACGCTCGCAGCTCGAGGGCGCGGTGGTGATGGGGCTCGGCATCGCGCTGCACGGCGAGATCACATTCA AGGACGGCCATCCGGAGCAGAGCAACTTCAACGGCTTCCAGGTGCTGCGCATGAACGAGGCGCCGCGCGAAATCCGTGTG CATCTCGTCGCACCGGACGATTTTGCGACCCCGCTCGGCGGCGTGGGCGAGCCGGGCCTGCCGCCCGTTGCGCCGGCGCT GACCAATGCGATCTTCGCGGCGACCGGCACGCGCATCCGCAGCCTGCCGGTTGCCGACCAGCTCGCGAAGCCCCGCGCGG GGTGA
Upstream 100 bases:
>100_bases CCGACATCGACGATGCGATGTCCGGCAACATCTGCCGCTGCGGCACCTATACGCGCATTCGCGCGGCGATTCGCCTAGCC GTGCGCCGCGGAGGTGCCGC
Downstream 100 bases:
>100_bases CACAATCCCCAGGCCGGGCCGCATCGTGCGGCCCGGTACGCATCCATCCTTGAACAAGGAGTGTCGACGTGGCCTCATCC GATGTCAGCGTGAAGCAGGC
Product: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
Products: NA
Alternate protein names: ALDH [H]
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MSAPELSVHNESRRALLLGFASGGLLLAFGVPSLVCAAVPVQPPVSANPQYGGAGMPHGLRDDPHLFVAIAPDGTVTVTC IRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRYGNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAAAWGVD TRQVKATVHEVVDTKSGRKLGFGELAAKAAALPAPDPATVALKAPAEFRYIGKGETALIDGRDIVGGRAHYGIDTRLDGM LYAVVARPPAYGDTVASFDASAAEKLPGVVKVVPLAPTPLPSGFQPLGGVAVVAHDTWTAIQARAQLKIDWKRGPHANYD SAAYRKTLEAAAAQPGDVIRNDGDAATALAGAAKRVRATYYIPHLAHATMEPPAAVARVADGRCEVWTCTQAPQTTRDEV AKALGLPTERVTVNVTLLGGGFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFEGGIDASGKVVA WQHRTVAPSIQSTFRAGVVHEQPGELAQGIADLPFAIPNVRIENPAAEAHTRIGWFRSVYNIPHAFGIQSFVSELAHAAG RDPKDFLLELIGPARRFEPHITVKNVNYGEDPALYPVDTGRLRRVVETVAREAGWGRKLPKGYGLGIAAHRSFVSYTAAV CEVQVDADGKITVPRVDIAIDCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGHPEQSNFNGFQVLRMNEAPREIRV HLVAPDDFATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPRAG
Sequences:
>Translated_774_residues MSAPELSVHNESRRALLLGFASGGLLLAFGVPSLVCAAVPVQPPVSANPQYGGAGMPHGLRDDPHLFVAIAPDGTVTVTC IRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRYGNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAAAWGVD TRQVKATVHEVVDTKSGRKLGFGELAAKAAALPAPDPATVALKAPAEFRYIGKGETALIDGRDIVGGRAHYGIDTRLDGM LYAVVARPPAYGDTVASFDASAAEKLPGVVKVVPLAPTPLPSGFQPLGGVAVVAHDTWTAIQARAQLKIDWKRGPHANYD SAAYRKTLEAAAAQPGDVIRNDGDAATALAGAAKRVRATYYIPHLAHATMEPPAAVARVADGRCEVWTCTQAPQTTRDEV AKALGLPTERVTVNVTLLGGGFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFEGGIDASGKVVA WQHRTVAPSIQSTFRAGVVHEQPGELAQGIADLPFAIPNVRIENPAAEAHTRIGWFRSVYNIPHAFGIQSFVSELAHAAG RDPKDFLLELIGPARRFEPHITVKNVNYGEDPALYPVDTGRLRRVVETVAREAGWGRKLPKGYGLGIAAHRSFVSYTAAV CEVQVDADGKITVPRVDIAIDCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGHPEQSNFNGFQVLRMNEAPREIRV HLVAPDDFATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPRAG >Mature_773_residues SAPELSVHNESRRALLLGFASGGLLLAFGVPSLVCAAVPVQPPVSANPQYGGAGMPHGLRDDPHLFVAIAPDGTVTVTCI RSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRYGNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAAAWGVDT RQVKATVHEVVDTKSGRKLGFGELAAKAAALPAPDPATVALKAPAEFRYIGKGETALIDGRDIVGGRAHYGIDTRLDGML YAVVARPPAYGDTVASFDASAAEKLPGVVKVVPLAPTPLPSGFQPLGGVAVVAHDTWTAIQARAQLKIDWKRGPHANYDS AAYRKTLEAAAAQPGDVIRNDGDAATALAGAAKRVRATYYIPHLAHATMEPPAAVARVADGRCEVWTCTQAPQTTRDEVA KALGLPTERVTVNVTLLGGGFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFEGGIDASGKVVAW QHRTVAPSIQSTFRAGVVHEQPGELAQGIADLPFAIPNVRIENPAAEAHTRIGWFRSVYNIPHAFGIQSFVSELAHAAGR DPKDFLLELIGPARRFEPHITVKNVNYGEDPALYPVDTGRLRRVVETVAREAGWGRKLPKGYGLGIAAHRSFVSYTAAVC EVQVDADGKITVPRVDIAIDCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGHPEQSNFNGFQVLRMNEAPREIRVH LVAPDDFATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPRAG
Specific function: Presumed To Be A Dehydrogenase, But Possibly An Oxidase. Participates In Limited Purine Salvage (Requires Aspartate) But Does Not Support Aerobic Growth On Purines As The Sole Carbon Source (Purine Catabolism). Deletion Results In Increased Adenine Sensit
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789230, Length=391, Percent_Identity=25.0639386189258, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI1786478, Length=135, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789246, Length=129, Percent_Identity=32.5581395348837, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.3 [H]
Molecular weight: Translated: 81800; Mature: 81669
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPELSVHNESRRALLLGFASGGLLLAFGVPSLVCAAVPVQPPVSANPQYGGAGMPHGL CCCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RDDPHLFVAIAPDGTVTVTCIRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRY CCCCEEEEEECCCCCEEEEEEEHHHCCCCCCEEEEEEEHHHCCCHHHHHHHHHHCCCCCC GNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAAAWGVDTRQVKATVHEVVDTKSGRKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC GFGELAAKAAALPAPDPATVALKAPAEFRYIGKGETALIDGRDIVGGRAHYGIDTRLDGM CHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCCCCCCEECCCCCCCCCE LYAVVARPPAYGDTVASFDASAAEKLPGVVKVVPLAPTPLPSGFQPLGGVAVVAHDTWTA EEEEEECCCCCCCCHHHCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHE IQARAQLKIDWKRGPHANYDSAAYRKTLEAAAAQPGDVIRNDGDAATALAGAAKRVRATY EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHEEEE YIPHLAHATMEPPAAVARVADGRCEVWTCTQAPQTTRDEVAKALGLPTERVTVNVTLLGG ECHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEEC GFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFEGGIDASGKVVA CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHEEHHHHCCCCCCCCCEEE WQHRTVAPSIQSTFRAGVVHEQPGELAQGIADLPFAIPNVRIENPAAEAHTRIGWFRSVY EECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHH NIPHAFGIQSFVSELAHAAGRDPKDFLLELIGPARRFEPHITVKNVNYGEDPALYPVDTG CCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHHCCCCEEEEECCCCCCCCEECCCHH RLRRVVETVAREAGWGRKLPKGYGLGIAAHRSFVSYTAAVCEVQVDADGKITVPRVDIAI HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEEECCCCEEEEEEEEEEE DCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGHPEQSNFNGFQVLRMNEAPREIRV ECCCCCCHHHHHHHHCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE HLVAPDDFATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPRAG EEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHCCCCCC >Mature Secondary Structure SAPELSVHNESRRALLLGFASGGLLLAFGVPSLVCAAVPVQPPVSANPQYGGAGMPHGL CCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RDDPHLFVAIAPDGTVTVTCIRSEMGQGVRTSVALVVADELGADWARVKVAQAVGDEPRY CCCCEEEEEECCCCCEEEEEEEHHHCCCCCCEEEEEEEHHHCCCHHHHHHHHHHCCCCCC GNQNTDGSRSLRQSFAALRRAGAAARTMLEQAAAAAWGVDTRQVKATVHEVVDTKSGRKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC GFGELAAKAAALPAPDPATVALKAPAEFRYIGKGETALIDGRDIVGGRAHYGIDTRLDGM CHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCCCCCCEECCCCCCCCCE LYAVVARPPAYGDTVASFDASAAEKLPGVVKVVPLAPTPLPSGFQPLGGVAVVAHDTWTA EEEEEECCCCCCCCHHHCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHE IQARAQLKIDWKRGPHANYDSAAYRKTLEAAAAQPGDVIRNDGDAATALAGAAKRVRATY EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHEEEE YIPHLAHATMEPPAAVARVADGRCEVWTCTQAPQTTRDEVAKALGLPTERVTVNVTLLGG ECHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEEC GFGRKSKPDYVVEAALLSKAVGAPVKLTFTREDDIAHDYFHAVSLEAFEGGIDASGKVVA CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHEEHHHHCCCCCCCCCEEE WQHRTVAPSIQSTFRAGVVHEQPGELAQGIADLPFAIPNVRIENPAAEAHTRIGWFRSVY EECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHH NIPHAFGIQSFVSELAHAAGRDPKDFLLELIGPARRFEPHITVKNVNYGEDPALYPVDTG CCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHCHHHHCCCCEEEEECCCCCCCCEECCCHH RLRRVVETVAREAGWGRKLPKGYGLGIAAHRSFVSYTAAVCEVQVDADGKITVPRVDIAI HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEEECCCCEEEEEEEEEEE DCGPQVNPERVRSQLEGAVVMGLGIALHGEITFKDGHPEQSNFNGFQVLRMNEAPREIRV ECCCCCCHHHHHHHHCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE HLVAPDDFATPLGGVGEPGLPPVAPALTNAIFAATGTRIRSLPVADQLAKPRAG EEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2606906 [H]