| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is pstS [H]
Identifier: 78065913
GI number: 78065913
Start: 1402280
End: 1403194
Strand: Direct
Name: pstS [H]
Synonym: Bcep18194_A4442
Alternate gene names: 78065913
Gene position: 1402280-1403194 (Clockwise)
Preceding gene: 78065912
Following gene: 78065914
Centisome position: 37.96
GC content: 64.26
Gene sequence:
>915_bases ATGCAAACCGCGATTGCCGGCCTGGCTGGCGCGCTTTTCGCCGTCGCCGCTCACGCTGCCGACATCACGGGCGCAGGCAG CACGTTCGCGATGCCGATCTATACGAAATGGGCTGCTGACTACCAGCAGACCGGCGGCGCGAAGGTCAACTACCAAGGTA TCGGCTCGTCGGGCGGCCTGAAGCAGATCGTCGCGAAGACGGTCGATTTTGCCGGTTCGGACGCTCCGCTGAAGGATGAC GAGCTTGCAAAGGAAGGCCTGTTCCAGTTCCCGACGGTGGTCGGCGGCGTGGTGCCGGTCGTCAACGTGCCGGGCGTGAA GGCCGGTGAACTGACGCTGTCGGGCCCGGTGCTCGGCGACATCTACCTCGGCAAGATCAAGAAGTGGAACGACCCGGCGA TCGCCGCGCTGAACCCGAAGGTCAAGCTGCCGGACACGGACATCGCCGTGGTTCGCCGCGCTGACGGCTCGGGCACGAGC TTCATCTGGACGAACTACCTGTCGAAGGTCAACGACGAGTGGAAGTCGAAGGTCGGCGAAGGCACGACGGTCAACTGGCC GACGGGCACGGGCGGCAAGGGCAACGACGGCGTCGCAGCCTTCGTGCAGCGCCTGCCGGGCGCAGTCGGCTACGTCGAAT GGGCGTACGCGAAGAAGAACAACATGGTCTACACGGCCCTGAAGAATTCGACGGGCACGGTGGTCGAGCCGAAGACGGAA ACGTTCAAGGCCGCTGCTGCAGGCGCGAACTGGTCGAAGTCGTTCTACCATGACGAACCAGCCGGGCAAGGAAGCATGGC CGGTCGTCGGCGCGACGTTCGTGCTGCTGCACGCAAAGCAGGACAAGCCGGAGCAGGGCGCGGAAACGCTGAAGTTCTTC AGCTGGGCGTTCAAGAACGGCGAGAAGGCTGCTGA
Upstream 100 bases:
>100_bases CACGCCAGTTTCATCGATTGTCACATTACCGTCATGAGGACCCCCTAACCTTCGCGGTGCCGTAGTCATCCGCTCACACA CTGGAGGTCTCATGAAATTG
Downstream 100 bases:
>100_bases CAGCCTCGACTACATCTCGCTGCCGCCGGCAGTCGAAGTGGAAATCCGCAAGCAGTGGAAGGCGAAGGTGACGGACGCTT CGGGCAAGTCGGTCGCCGCC
Product: ABC transporter, periplasmic phosphate binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MQTAIAGLAGALFAVAAHAADITGAGSTFAMPIYTKWAADYQQTGGAKVNYQGIGSSGGLKQIVAKTVDFAGSDAPLKDD ELAKEGLFQFPTVVGGVVPVVNVPGVKAGELTLSGPVLGDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSGTS FIWTNYLSKVNDEWKSKVGEGTTVNWPTGTGGKGNDGVAAFVQRLPGAVGYVEWAYAKKNNMVYTALKNSTGTVVEPKTE TFKAAAAGANWSKSFYHDEPAGQGSMAGRRRDVRAAARKAGQAGAGRGNAEVLQLGVQERREGC
Sequences:
>Translated_304_residues MQTAIAGLAGALFAVAAHAADITGAGSTFAMPIYTKWAADYQQTGGAKVNYQGIGSSGGLKQIVAKTVDFAGSDAPLKDD ELAKEGLFQFPTVVGGVVPVVNVPGVKAGELTLSGPVLGDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSGTS FIWTNYLSKVNDEWKSKVGEGTTVNWPTGTGGKGNDGVAAFVQRLPGAVGYVEWAYAKKNNMVYTALKNSTGTVVEPKTE TFKAAAAGANWSKSFYHDEPAGQGSMAGRRRDVRAAARKAGQAGAGRGNAEVLQLGVQERREGC >Mature_304_residues MQTAIAGLAGALFAVAAHAADITGAGSTFAMPIYTKWAADYQQTGGAKVNYQGIGSSGGLKQIVAKTVDFAGSDAPLKDD ELAKEGLFQFPTVVGGVVPVVNVPGVKAGELTLSGPVLGDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSGTS FIWTNYLSKVNDEWKSKVGEGTTVNWPTGTGGKGNDGVAAFVQRLPGAVGYVEWAYAKKNNMVYTALKNSTGTVVEPKTE TFKAAAAGANWSKSFYHDEPAGQGSMAGRRRDVRAAARKAGQAGAGRGNAEVLQLGVQERREGC
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=251, Percent_Identity=66.5338645418327, Blast_Score=343, Evalue=6e-96,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 31665; Mature: 31665
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAIAGLAGALFAVAAHAADITGAGSTFAMPIYTKWAADYQQTGGAKVNYQGIGSSGGL CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCH KQIVAKTVDFAGSDAPLKDDELAKEGLFQFPTVVGGVVPVVNVPGVKAGELTLSGPVLGD HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCEEE IYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSGTSFIWTNYLSKVNDEWKSKVGE EEECCCCCCCCCEEEEECCCEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC GTTVNWPTGTGGKGNDGVAAFVQRLPGAVGYVEWAYAKKNNMVYTALKNSTGTVVEPKTE CCEEECCCCCCCCCCCHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEECCCCCEECCCHH TFKAAAAGANWSKSFYHDEPAGQGSMAGRRRDVRAAARKAGQAGAGRGNAEVLQLGVQER HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH REGC HCCC >Mature Secondary Structure MQTAIAGLAGALFAVAAHAADITGAGSTFAMPIYTKWAADYQQTGGAKVNYQGIGSSGGL CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCH KQIVAKTVDFAGSDAPLKDDELAKEGLFQFPTVVGGVVPVVNVPGVKAGELTLSGPVLGD HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCEEE IYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSGTSFIWTNYLSKVNDEWKSKVGE EEECCCCCCCCCEEEEECCCEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC GTTVNWPTGTGGKGNDGVAAFVQRLPGAVGYVEWAYAKKNNMVYTALKNSTGTVVEPKTE CCEEECCCCCCCCCCCHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEECCCCCEECCCHH TFKAAAAGANWSKSFYHDEPAGQGSMAGRRRDVRAAARKAGQAGAGRGNAEVLQLGVQER HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH REGC HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6321434; 6365894; 7686882; 9278503; 9298646; 2215649; 9228942; 9671506 [H]