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The map label for this gene is hspC2 [H]

Identifier: 78065877

GI number: 78065877

Start: 1366284

End: 1366724

Strand: Reverse

Name: hspC2 [H]

Synonym: Bcep18194_A4406

Alternate gene names: 78065877

Gene position: 1366724-1366284 (Counterclockwise)

Preceding gene: 78065879

Following gene: 78065876

Centisome position: 37.0

GC content: 65.99

Gene sequence:

>441_bases
ATGAGCGGTATCCATTTCGGCAGCGACCTGTTCGACGAATTCGCCCGCGTGCAGCGGCAAGTGGCCAACCTGCTGGGCGA
ACGTCCGTCCGGCATTCGCGCGGTGCGGCCCGGCGCCTTTCCCGCGCTCAACGTCGGCGCCACCGACGGCGCCATCGAGA
TCGTCGCGTTTGCGCCCGGCATGGCCGCGGCCGACTTCGACGTATCGATCGACAAGGACTTGCTGACGATCAGCGGCGAG
CGCAAGCCGGCGGCTCGCAGCGAAGGCGACGATCTGCGTACTTATGCGCAGGAGCGTTTTCACGGTGCATTCCGTCGCGT
CGTCGAGTTGCCGCGGGATGCAGACTCCGACCAGGTCAGCGCCCGCTACGAAAACGGCTGCCTGCTGATTCGCGTCGGCC
GGCGCGAGGCATCGAAGCCGCGTGCAATCACCGTTCAATAA

Upstream 100 bases:

>100_bases
ACGCACTGCCCCCGTTTCGACCCAGTGGAGCTTCCACGTCGCGCCCGCCGCAGGCGCCGCGCCGTCACGTCTCCCGTGTT
CCCTGTTCAGGAGGACCAAC

Downstream 100 bases:

>100_bases
TATTCAGGATACCGACATGAATGCGAACCCGACCCTGGCCGAGCGTCAGACGAACACCGTTCACCCCGCTGCCGCCGAAG
CGGCCCGCCGGCCCGCGATC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSGIHFGSDLFDEFARVQRQVANLLGERPSGIRAVRPGAFPALNVGATDGAIEIVAFAPGMAAADFDVSIDKDLLTISGE
RKPAARSEGDDLRTYAQERFHGAFRRVVELPRDADSDQVSARYENGCLLIRVGRREASKPRAITVQ

Sequences:

>Translated_146_residues
MSGIHFGSDLFDEFARVQRQVANLLGERPSGIRAVRPGAFPALNVGATDGAIEIVAFAPGMAAADFDVSIDKDLLTISGE
RKPAARSEGDDLRTYAQERFHGAFRRVVELPRDADSDQVSARYENGCLLIRVGRREASKPRAITVQ
>Mature_145_residues
SGIHFGSDLFDEFARVQRQVANLLGERPSGIRAVRPGAFPALNVGATDGAIEIVAFAPGMAAADFDVSIDKDLLTISGER
KPAARSEGDDLRTYAQERFHGAFRRVVELPRDADSDQVSARYENGCLLIRVGRREASKPRAITVQ

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15886; Mature: 15755

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIHFGSDLFDEFARVQRQVANLLGERPSGIRAVRPGAFPALNVGATDGAIEIVAFAPG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCEEEEEEECCC
MAAADFDVSIDKDLLTISGERKPAARSEGDDLRTYAQERFHGAFRRVVELPRDADSDQVS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ARYENGCLLIRVGRREASKPRAITVQ
EEECCCEEEEEECCCCCCCCCEEEEC
>Mature Secondary Structure 
SGIHFGSDLFDEFARVQRQVANLLGERPSGIRAVRPGAFPALNVGATDGAIEIVAFAPG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCEEEEEEECCC
MAAADFDVSIDKDLLTISGERKPAARSEGDDLRTYAQERFHGAFRRVVELPRDADSDQVS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ARYENGCLLIRVGRREASKPRAITVQ
EEECCCEEEEEECCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA