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The map label for this gene is amaB [H]

Identifier: 78065862

GI number: 78065862

Start: 1350110

End: 1351393

Strand: Direct

Name: amaB [H]

Synonym: Bcep18194_A4391

Alternate gene names: 78065862

Gene position: 1350110-1351393 (Clockwise)

Preceding gene: 78065861

Following gene: 78065863

Centisome position: 36.55

GC content: 70.02

Gene sequence:

>1284_bases
ATGAAAGACCTGCTTGAAATCGACGGTGCCCGTTTGTGGCAGAGCCTGGCTGACATGGCGCGGGTCGGTGCGACACCGCG
CGGCGGCGTGCGGCGCCTCGCGCTCACCGACGACGACCGTCGCGGGCGCGACCTGTTCGCGCAGTGGTGCCGCGACGCGG
GGATGACGGTGAGCGTCGACGCAGTCGGCAACCTGTTTGCGCGGCGCGACGGCACCGATGCGCAGGCCGCGCCGGTGCTG
ATCGGCAGCCATCTCGACACGCAGCCCGAAGGCGGCCGCTTCGACGGCGTCTATGGCGTGCTCGCCGCGCTCGAACTCGT
GCGCACGCTGAACGACGCCGGCATCGCGACCGGCAAGCCGCTGGAAATCGTGTCGTGGACCAACGAGGAGGGCGCGCGTT
TCGCGCCGGCGATGCTCGGCTCGGCCGTGTTCACGGGCGCGTTGCCGCTCGACGATGCGCTCGCGAAGCAGGACGCCGAC
GGCGTCACGCTCGGCGCGGCACTGGACGCATGCGGCTATCGCGGCACGCGCACGATGGGCGGCGCGGTCGATGCGTACTT
CGAAGCGCATATCGAACAGGGGCCCGTGCTCGAGGCGAACGGCACGACGATCGGTATCGTCACCGGCGGGCAGGCGATCC
GCTGGCTCGACGTGACGGTGACGGGCGTGGCCGCGCATGCGGGCACGACGCCGATGCCGTATCGCAAGGATGCGTATTTC
GCGAGTGCGCAGATGGCGATCGAACTCGAACGGATCGTCGCCGGTCATGCGCCGCGCGGGCTCGCGACGATCGGGCAGGT
CGGCATCCGCAATGCGTCGCGCAACACCATTGCCGGCGAGACGACGTTCACGGTCGACCTTCGCCATCACGACGATGCGC
AAGTCGATGCGATGGAGCGCGACTTGCGCGATGCGTGCACACGTGTCGCCGCCGCGCGTGGCGTGCAGGTCACGATCGAC
ACCTGCTGGCGCAGCCCGGCGACGCCGTTCGATCGCGACTGCGTCCAGCGGGTCGCGCAGGCGGCCGCCGCGTTCGGCTA
TACGAACGAGCGGATCGTCAGCGGCGCCGGGCACGACGCGATCCTGCTCGCGCGTTGCGTCCCGACCGCGATGGTGTTCA
TCCCGTGTGTCGACGGCCTGTCGCACAACGAAGCCGAGGATGCGTTGCCTGCCGACGTGACGCGCGGCACGAACGTGCTG
CTTCATGCGGTGCTCGCGCGCGCCGGCGTTGAAGCGGGTATTGCAGCGGGCGTTGCCGCGGCGGCCACCACGCAGGATGC
GTGA

Upstream 100 bases:

>100_bases
TGCATCGTCGCGCTCGACGCACGGCGCGCGGCACGGCCGGCTGCTGCCGAAGCGCTCGGCTCGCAGTGACCCTCAACGAA
CGAATTCATCCGGAGTGCAC

Downstream 100 bases:

>100_bases
CGCGGAAAACCGATCAATCGGCATAACGAAAAACCGACGAGGGCGAACGATGAAAACCTATTTCCATCCCGAGCAGTTGC
TGCACCATCCGCGCAGCTAC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKDLLEIDGARLWQSLADMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRDGTDAQAAPVL
IGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATGKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDAD
GVTLGAALDACGYRGTRTMGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDAYF
ASAQMAIELERIVAGHAPRGLATIGQVGIRNASRNTIAGETTFTVDLRHHDDAQVDAMERDLRDACTRVAAARGVQVTID
TCWRSPATPFDRDCVQRVAQAAAAFGYTNERIVSGAGHDAILLARCVPTAMVFIPCVDGLSHNEAEDALPADVTRGTNVL
LHAVLARAGVEAGIAAGVAAAATTQDA

Sequences:

>Translated_427_residues
MKDLLEIDGARLWQSLADMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRDGTDAQAAPVL
IGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATGKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDAD
GVTLGAALDACGYRGTRTMGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDAYF
ASAQMAIELERIVAGHAPRGLATIGQVGIRNASRNTIAGETTFTVDLRHHDDAQVDAMERDLRDACTRVAAARGVQVTID
TCWRSPATPFDRDCVQRVAQAAAAFGYTNERIVSGAGHDAILLARCVPTAMVFIPCVDGLSHNEAEDALPADVTRGTNVL
LHAVLARAGVEAGIAAGVAAAATTQDA
>Mature_427_residues
MKDLLEIDGARLWQSLADMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRDGTDAQAAPVL
IGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATGKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDAD
GVTLGAALDACGYRGTRTMGGAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDAYF
ASAQMAIELERIVAGHAPRGLATIGQVGIRNASRNTIAGETTFTVDLRHHDDAQVDAMERDLRDACTRVAAARGVQVTID
TCWRSPATPFDRDCVQRVAQAAAAFGYTNERIVSGAGHDAILLARCVPTAMVFIPCVDGLSHNEAEDALPADVTRGTNVL
LHAVLARAGVEAGIAAGVAAAATTQDA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=394, Percent_Identity=33.502538071066, Blast_Score=205, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44712; Mature: 44712

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLLEIDGARLWQSLADMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVD
CCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEHH
AVGNLFARRDGTDAQAAPVLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATGKP
HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
LEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDADGVTLGAALDACGYRGTRTMG
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHCCCCCCCCCC
GAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDAYF
CHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH
ASAQMAIELERIVAGHAPRGLATIGQVGIRNASRNTIAGETTFTVDLRHHDDAQVDAMER
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH
DLRDACTRVAAARGVQVTIDTCWRSPATPFDRDCVQRVAQAAAAFGYTNERIVSGAGHDA
HHHHHHHHHHHHCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCH
ILLARCVPTAMVFIPCVDGLSHNEAEDALPADVTRGTNVLLHAVLARAGVEAGIAAGVAA
HHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHCCCHHHHHHHHHHHHCHHHHHHHHHHH
AATTQDA
HHCCCCC
>Mature Secondary Structure
MKDLLEIDGARLWQSLADMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVD
CCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEHH
AVGNLFARRDGTDAQAAPVLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATGKP
HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
LEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDADGVTLGAALDACGYRGTRTMG
EEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHCCCCCCCCCC
GAVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDAYF
CHHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH
ASAQMAIELERIVAGHAPRGLATIGQVGIRNASRNTIAGETTFTVDLRHHDDAQVDAMER
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH
DLRDACTRVAAARGVQVTIDTCWRSPATPFDRDCVQRVAQAAAAFGYTNERIVSGAGHDA
HHHHHHHHHHHHCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCH
ILLARCVPTAMVFIPCVDGLSHNEAEDALPADVTRGTNVLLHAVLARAGVEAGIAAGVAA
HHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHCCCHHHHHHHHHHHHCHHHHHHHHHHH
AATTQDA
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]