| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is astE
Identifier: 78065768
GI number: 78065768
Start: 1235726
End: 1236781
Strand: Direct
Name: astE
Synonym: Bcep18194_A4296
Alternate gene names: 78065768
Gene position: 1235726-1236781 (Clockwise)
Preceding gene: 78065767
Following gene: 78065769
Centisome position: 33.45
GC content: 70.74
Gene sequence:
>1056_bases ATGACTTCCAGCGTTGATTCGCGCATGGCCGACGCGCTGCTCGACGACTTCCTCGCGTTCACGCTGACCGGCAGCGCACC GTCCGCCACGGACGGCGCCTGCGCCGCCGGCGCCGTGCGCTGGCAATGGCTCGGCGACGGGCTGCTCGCCCTCGAACCGG CTGCGGCCGAGGCCGCCGATACGGCGCGCGCGAGCGTGCTGGTGTCGGCCGGCGTGCACGGTGACGAGACGGCGCCGATC GAGCTGCTGTCGATGCTGGTGCGCGATCTTGCATCGGGGGCGCTGCCGCTCGCGTGCCGGCTGCTCGTCGTGCTCGGCAA CGTGCCGGCGATGCGCGCCGGTGAACGCTATCTCGACGACGACCTGAACCGCCTGTTCAGCGGCCGTCACGCGCAGGTGC CCGACAGTCGCGAAGCGCCGCGTGCCACGCAGCTCGAAGCCGCTGCCGCCGCGTTCTTCGCGGCCGCGCCGGCCGGCGCC GCGCGCTGGCACATCGACATGCATACGGCGATCCGCGCATCGGTGTTCGAGCAGTTCGCCCTGCTGCCGCATACGGGCAT GCCGCCGACGCGCACGATGTTCGAATGGCTCGGCGACGCGCAGATCGCGGCCGTGCTGCTGCATACCGCGAAGGGCAACA CGTACTCGCATTTCACGGCCGAGCACTGCGGCGCGCTCGCGTGCACGCTGGAACTCGGCAAGGTGCGTCCGTTCGGCCAG AACGACCTGACGCGCTTCGCGCCGGCCGACCGCGCGGTGCGCAAGCTCGTGTCGGGCGCGACTGGTGAGGCCGACGTCCC GTTGCCGCGCGTCTTCACGGTGATCGACCAGATCACGAAGCAGAGCGACGCGCTCGAGTTGTTCGTCGCGGCCGACGTCG CGAACTTCACCGCGTTCGCACGCGGCACGGTGCTCGCGCAGGACGGCGACTACCGCTACACGGTGACGCACGACGAGGAG CGCATCGTGTTCCCGAATCCGTCGGTGAAGCCGGGTTTGCGCGCGGGTCTGCTCGTCATCGACACGACTCGCGAGACGGT CGCGGCGCTCGTCTGA
Upstream 100 bases:
>100_bases GATCGCCTCGCACCGGAAGACCTCGCCGATCCGGCGCTGCTCGAGGAATCGCGCACGGCGCTCGACGAGCTCACGCAGAT CCTGCGCGTCGGTTCGCTGT
Downstream 100 bases:
>100_bases CGGTGGCCGATTGCGCGTGGCCGCGGCGACCTGCGGCCCGCGCATCACCCGGCCACCATTCCGTTTTCGAGATTAAGCCC GCACGCCGCGCAGATGGCCC
Product: succinylglutamate desuccinylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTSSVDSRMADALLDDFLAFTLTGSAPSATDGACAAGAVRWQWLGDGLLALEPAAAEAADTARASVLVSAGVHGDETAPI ELLSMLVRDLASGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPDSREAPRATQLEAAAAAFFAAAPAGA ARWHIDMHTAIRASVFEQFALLPHTGMPPTRTMFEWLGDAQIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQ NDLTRFAPADRAVRKLVSGATGEADVPLPRVFTVIDQITKQSDALELFVAADVANFTAFARGTVLAQDGDYRYTVTHDEE RIVFPNPSVKPGLRAGLLVIDTTRETVAALV
Sequences:
>Translated_351_residues MTSSVDSRMADALLDDFLAFTLTGSAPSATDGACAAGAVRWQWLGDGLLALEPAAAEAADTARASVLVSAGVHGDETAPI ELLSMLVRDLASGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPDSREAPRATQLEAAAAAFFAAAPAGA ARWHIDMHTAIRASVFEQFALLPHTGMPPTRTMFEWLGDAQIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQ NDLTRFAPADRAVRKLVSGATGEADVPLPRVFTVIDQITKQSDALELFVAADVANFTAFARGTVLAQDGDYRYTVTHDEE RIVFPNPSVKPGLRAGLLVIDTTRETVAALV >Mature_350_residues TSSVDSRMADALLDDFLAFTLTGSAPSATDGACAAGAVRWQWLGDGLLALEPAAAEAADTARASVLVSAGVHGDETAPIE LLSMLVRDLASGALPLACRLLVVLGNVPAMRAGERYLDDDLNRLFSGRHAQVPDSREAPRATQLEAAAAAFFAAAPAGAA RWHIDMHTAIRASVFEQFALLPHTGMPPTRTMFEWLGDAQIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQN DLTRFAPADRAVRKLVSGATGEADVPLPRVFTVIDQITKQSDALELFVAADVANFTAFARGTVLAQDGDYRYTVTHDEER IVFPNPSVKPGLRAGLLVIDTTRETVAALV
Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily
Homologues:
Organism=Escherichia coli, GI1788040, Length=327, Percent_Identity=46.177370030581, Blast_Score=298, Evalue=3e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ASTE_BURS3 (Q39I23)
Other databases:
- EMBL: CP000151 - RefSeq: YP_368537.1 - HSSP: Q9KSL4 - ProteinModelPortal: Q39I23 - SMR: Q39I23 - STRING: Q39I23 - GeneID: 3749495 - GenomeReviews: CP000151_GR - KEGG: bur:Bcep18194_A4296 - NMPDR: fig|269483.3.peg.5516 - eggNOG: COG2988 - HOGENOM: HBG298271 - OMA: RWRWLGH - ProtClustDB: PRK05324 - BioCyc: BSP36773:BCEP18194_A4296-MONOMER - HAMAP: MF_00767 - InterPro: IPR007036 - InterPro: IPR016681 - PIRSF: PIRSF017020 - TIGRFAMs: TIGR03242
Pfam domain/function: PF04952 AstE_AspA
EC number: =3.5.1.96
Molecular weight: Translated: 37232; Mature: 37100
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: ACT_SITE 231-231
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSVDSRMADALLDDFLAFTLTGSAPSATDGACAAGAVRWQWLGDGLLALEPAAAEAAD CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCEEEEEECCCCEEECCCHHHHHH TARASVLVSAGVHGDETAPIELLSMLVRDLASGALPLACRLLVVLGNVPAMRAGERYLDD HHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCHHHHH DLNRLFSGRHAQVPDSREAPRATQLEAAAAAFFAAAPAGAARWHIDMHTAIRASVFEQFA HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH LLPHTGMPPTRTMFEWLGDAQIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQ HCCCCCCCCHHHHHHHHCCHHEEHHHHECCCCCCCCCCCHHHHCEEEEEEECCCCCCCCC NDLTRFAPADRAVRKLVSGATGEADVPLPRVFTVIDQITKQSDALELFVAADVANFTAFA CCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHH RGTVLAQDGDYRYTVTHDEERIVFPNPSVKPGLRAGLLVIDTTRETVAALV CCEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHCC >Mature Secondary Structure TSSVDSRMADALLDDFLAFTLTGSAPSATDGACAAGAVRWQWLGDGLLALEPAAAEAAD CCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCEEEEEECCCCEEECCCHHHHHH TARASVLVSAGVHGDETAPIELLSMLVRDLASGALPLACRLLVVLGNVPAMRAGERYLDD HHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCHHHHH DLNRLFSGRHAQVPDSREAPRATQLEAAAAAFFAAAPAGAARWHIDMHTAIRASVFEQFA HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH LLPHTGMPPTRTMFEWLGDAQIAAVLLHTAKGNTYSHFTAEHCGALACTLELGKVRPFGQ HCCCCCCCCHHHHHHHHCCHHEEHHHHECCCCCCCCCCCHHHHCEEEEEEECCCCCCCCC NDLTRFAPADRAVRKLVSGATGEADVPLPRVFTVIDQITKQSDALELFVAADVANFTAFA CCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHH RGTVLAQDGDYRYTVTHDEERIVFPNPSVKPGLRAGLLVIDTTRETVAALV CCEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA